New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3084183 =38 (0.650)4 (0.070) 3/254 NT 9.9% coding (927/987 nt) PP_2693 putative Dipeptidase
?NC_002947 3084213 = 36 (0.630)coding (897/987 nt) PP_2693 putative Dipeptidase

GCCGTCGGCCTGCAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGC  >  NC_002947/3084035‑3084331
                                                                                                                                                    |                                                                                                                                                    
gccGTCGGCCTGCAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTg                                                                                                                                                      <  4:151243/149‑1 (MQ=255)
   gTCGGCCTGCAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGcc                                                                                                                                                    >  3:137854/1‑148 (MQ=255)
      ggCCTGCAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCAc                                                                                                                                                 <  4:137854/148‑1 (MQ=255)
            cAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTg                                                                                                                                           <  1:70390/148‑1 (MQ=255)
            cAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGc                                                                                                                                          >  4:109547/1‑149 (MQ=255)
            cAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGc                                                                                                                                          <  3:338861/149‑1 (MQ=255)
                   gtTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCa                                                                                                                                    >  6:313384/1‑148 (MQ=255)
                      gggTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAg                                                                                                                                 <  3:289990/148‑1 (MQ=255)
                        gTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGACCACGTCGTGCTCGGCAAAGCcg                                                                                                                              >  3:120267/1‑149 (MQ=255)
                            ttCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTTCTCGGCAAAGCCGCgg                                                                                                                           <  6:198178/148‑1 (MQ=255)
                            ttCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCgg                                                                                                                           <  7:90532/148‑1 (MQ=255)
                                 gAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGgcgcg                                                                                                                      >  1:291562/1‑148 (MQ=255)
                                  aaaCCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCa                                                                                                                    <  5:313384/149‑1 (MQ=255)
                                   aaCCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAg                                                                                                                   >  7:221334/1‑149 (MQ=255)
                                                  cGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGtt                                                                                                    <  3:109547/149‑1 (MQ=255)
                                                    aTTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCt                                                                                                              <  3:32899/137‑1 (MQ=255)
                                                    aTTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCt                                                                                                              >  4:32899/1‑137 (MQ=255)
                                                     ttGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCg                                                                                                 >  5:158790/1‑149 (MQ=255)
                                                      ctgcgaaggctccagggacaacgccaactggccggcgcccttgcagtggttccgcgacagccgcgacctccgcaacatcgcccagggcctgcgcGCCCACGTCGTGCTCGGCAAAGCCGCGGgcgc                                                                                                                       >  6:274104‑M1/95‑126 (MQ=255)
                                                      ctgcgaaggctccagggacaacgccaactggccggcgcccttgcagtggttccgcgacagccgcgacctccgcaacatcgcccagggcctgcgcGCCCACGTCGTGCTCGGCAAAGCCGCGGgcgc                                                                                                                       <  5:274104‑M1/32‑1 (MQ=255)
                                                        tttttATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGa                                                                                               <  1:94023/148‑1 (MQ=255)
                                                              ttgttgATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTcgcg                                                                                        <  6:36562/149‑1 (MQ=255)
                                                                gttgATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCgg                                                                                       <  2:291562/148‑1 (MQ=255)
                                                                 ttgATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCt                                                                                     >  5:103826/1‑149 (MQ=255)
                                                                      gCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTcgc                                                                                >  3:93086/1‑149 (MQ=255)
                                                                          tCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGaa                                                                            >  1:232555/1‑149 (MQ=255)
                                                                            gccaactggccggcgcccttgcagtggttccgcgacagccgcgacctccgcaacatcgcccagggcctgcgcGCCCACGTCGTGCTCGGCAAAGCCGCGGgc                                                                                                                         >  8:335878‑M1/73‑102 (MQ=255)
                                                                            gccaactggccggcgcccttgcagtggttccgcgacagccgcgacctccgcaacatcgcccagggcctgcgcGCCCACGTCGTGCTCGGCAAAGCCGCGGgc                                                                                                                         <  7:335878‑M1/30‑1 (MQ=255)
                                                                              tGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCAc                                                                        >  1:348703/1‑149 (MQ=255)
                                                                                 aaaGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTg                                                                      >  8:75729/1‑148 (MQ=255)
                                                                                  aaGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACt                                                                       <  4:358557/146‑1 (MQ=255)
                                                                                  aaGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACt                                                                       >  3:358557/1‑146 (MQ=255)
                                                                                  aaGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGc                                                                     >  3:112184/1‑148 (MQ=255)
                                                                                  aaGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGCGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCCATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGc                                                                     >  4:48608/1‑148 (MQ=255)
                                                                                    gggTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAg                                                                  <  2:348703/149‑1 (MQ=255)
                                                                                     ggTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAgg                                                                 <  6:158790/149‑1 (MQ=255)
                                                                                           ggCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCg                                                           <  7:75729/149‑1 (MQ=255)
                                                                                            gCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGa                                                                                               <  8:316478/112‑1 (MQ=255)
                                                                                                     gtggtgGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGc                                                 <  4:112184/149‑1 (MQ=255)
                                                                                                                       agGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTc                               <  8:221334/149‑1 (MQ=255)
                                                                                                                         gcgcAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGc                             >  3:155605/1‑149 (MQ=255)
                                                                                                                           gcAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCg                           >  4:351203/1‑149 (MQ=255)
                                                                                                                                     cAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGc                             >  5:104799/1‑137 (MQ=255)
                                                                                                                                     cAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGc                             <  6:104799/137‑1 (MQ=255)
                                                                                                                                                 gTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCCGGCCCAGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGCAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGCAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGc     >  2:276810/1‑149 (MQ=255)
                                                                                                                                                    GCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGc  <  4:47967‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCCGTCGGCCTGCAAGGTGGTTGGGTTTTTCATGAAACCTCCGGAACCTGCGATTGTTTTTATTGTTGATGCTGTCCGTGCAAAGGGTTCAGGCCTGTGCCGTGGTGGCGGTCTCCAGCAGGCGCAACCAGTTCAGCCCCATGATGTTGCCCACGTCGTGCTCGGCAAAGCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGC  >  NC_002947/3084035‑3084331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.