New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 489639838 (0.650)12 (0.240) 7/220 NT 28.3% intergenic (+31/‑177) PP_4304/sbp‑I VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
?NC_002947 = 4896445 29 (0.590)intergenic (+78/‑130) PP_4304/sbp‑I VIC family cation transporter/sulfate ABC transporter substrate‑binding protein

CCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTG  >  NC_002947/4896255‑4896543
                                                                                                                                               |                                                                                                                                                    
ccATGAGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCg                                                                                                                                                  <  4:222315/148‑1 (MQ=255)
 cATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCt                                                                                                                                                >  2:191265/1‑149 (MQ=255)
  aTGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTc                                                                                                                                               <  1:191265/149‑1 (MQ=255)
         gggAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACa                                                                                                                                          <  8:30843/147‑1 (MQ=255)
         gggAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACa                                                                                                                                          >  7:30843/1‑147 (MQ=255)
            agcagcTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacggggga                                                                                                                                     <  7:86990‑M1/149‑18 (MQ=255)
               agcTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGa                                                                                                                                  <  3:55907/149‑1 (MQ=255)
               agcTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGGTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGa                                                                                                                                  <  7:150631/149‑1 (MQ=255)
                 cTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcg                                                                                                                                >  6:87423‑M1/1‑127 (MQ=255)
                 cTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcg                                                                                                                                >  6:251336‑M1/1‑127 (MQ=255)
                     agcaTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTgc                                                                                                                            <  5:372430/149‑1 (MQ=255)
                        aTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtc                                                                                                                         >  5:346673‑M1/1‑120 (MQ=255)
                        aTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGgc                                                                                                                                       <  2:247973/135‑1 (MQ=255)
                        aTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGgc                                                                                                                                       >  1:247973/1‑135 (MQ=255)
                                 cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGt                                                                                                             >  8:112829/1‑149 (MQ=255)
                                  gACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa                                                                                                            <  7:112829/149‑1 (MQ=255)
                                     cTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAg                                                                                                           >  6:377753/1‑147 (MQ=255)
                                       gCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCTAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTTAATACGCTCGAACAGGGGCGGACCGTGGGCGGGCC‑‑‑CCCGTAggggg                                                                                                       >  8:318279/1‑146 (MQ=255)
                                       gCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGc                                                                                                       <  7:345682/149‑1 (MQ=255)
                                       gCCACAAGAAGACCCACGAGCAGGGGGCGGCGGTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTATAcccgctcatacggtggacagcgaacggtcatcgcatgtatac                                                                                                            >  6:344533‑M1/1‑105 (MQ=255)
                                        ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                          <  5:87423‑M1/148‑45 (MQ=255)
                                        ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                          <  5:251336‑M1/148‑45 (MQ=255)
                                        ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAtccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                          <  8:303702‑M1/148‑45 (MQ=255)
                                        ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                          <  7:110631‑M1/148‑45 (MQ=255)
                                         cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg                                                                                                     <  3:54109/149‑1 (MQ=255)
                                          acaacaAGACCCACGAGCAGGGGGCGGCGTTCTGGTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg                                                                                                    <  5:100764/149‑1 (MQ=255)
                                          acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtagtagcgga                                                                                                       <  6:346673‑M1/149‑48 (MQ=255)
                                            aagaagACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTAGCGGGTTAATACGCTGCTACAGGCGCGGACCGTGCGCGGTGC‑‑‑CCCGGTGGAGCggggt                                                                                                  >  3:330160/1‑147 (MQ=255)
                                              gaagaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg                                                                                                    >  2:351237/1‑145 (MQ=255)
                                              gaagaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg                                                                                                    <  1:351237/145‑1 (MQ=255)
                                              gaagaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGttta                                                                                                <  3:209028‑M2/149‑5 (MQ=255)
                                                 gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcgga                                                                                                       <  3:92141‑M1/142‑48 (MQ=255)
                                                 gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcgga                                                                                                       >  4:92141‑M1/1‑95 (MQ=255)
                                                 gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttaccc                                                                                             >  8:332671‑M2/1‑142 (MQ=255)
                                                    ccACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgc                                                                                           <  7:275669‑M2/148‑10 (MQ=255)
                                                    ccACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCACATCGCGGGTAAATACGCTCCGACAGGCGCGGACCGTGCGCGGGGC‑‑‑CCCGTAGGAGCGGGgttacccgc                                                                                           <  1:125566‑M2/148‑10 (MQ=255)
                                                    ccACGAGCAGGGGGCGGCGTTCCGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgc                                                                                           <  6:281429‑M2/148‑10 (MQ=255)
                                                    ccACGAGCAGGGGGCGGCGTTCCGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGGAGGAGCGGGtttacccgc                                                                                           <  4:224464‑M2/148‑10 (MQ=255)
                                                      aCGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaa                                                                                        >  4:209028‑M2/1‑137 (MQ=255)
                                                        gAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaaga                                                                                      >  5:377753‑M2/1‑135 (MQ=255)
                                                        gAGCAGGGGGCGGCGTTCCGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTCCAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaaga                                                                                      >  3:224464‑M2/1‑135 (MQ=255)
                                                        gAGCAGGGGGCGGCGTTCCGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaaga                                                                                      >  5:281429‑M2/1‑135 (MQ=255)
                                                                       ttctgttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                                                                          >  5:328898/1‑146 (MQ=255)
                                                                       ttctgttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATACGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                                                                          >  3:264323/1‑146 (MQ=255)
                                                                         ctgttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCACCTACAGGCGCGGACCCTGCGCGGTAC‑‑‑CCCGTAGGAGCGGGTTTACCCCCGAAGAGGCCGGCACAGGCAGa                                                                      >  6:293929/1‑148 (MQ=255)
                                                                                     tgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCACTTCGCGGGTTAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCCGGTTTAACCGCGAAGCGGCCCGcac                                                                             >  7:217550/1‑129 (MQ=255)
                                                                                           tGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCAttt                                                    <  8:275669/148‑1 (MQ=255)
                                                                                             ggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCACCAACACGCGCGGACCGTGCGCGGTCC‑‑‑CCCGGAGGAGCGGGGTTAACCGCGAAGAGGCCGGCACAGGCAGAACCAAAACCAAAGACtttttt                                                 >  4:31179/1‑149 (MQ=38)
                                                                                             ggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTATTAGCGGGTAAATACGCTCCAACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGGAGGAGCGGGTTTACCCGCGAAACGGCCGGCCCAGGCAGAACCAAAACCAAAGCAtttttt                                                 >  4:26403/1‑149 (MQ=255)
                                                                                               ttgttTCCGAAAGGGTTATTGCGCCTGCGCCGTCATCTTCTCGTGTAAATCCGCTCATATATTCGCGTACCGTGGGCTGTCC‑‑‑CCCGTTGGAGCGTGTTTACCCGCGAAGAGGCAGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGt                                               <  4:264323/149‑1 (MQ=255)
                                                                                                      ccAACGGGTGATGCCGCCGGGGCGGGCCGGTGCGCGGTTAAACCCGCTCCTCCCGGCGCGCACCGTGCGCGCTCC‑‑‑CCCGACGGTGGGGTTTAACCCGGGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTaa                                        <  1:338609/149‑1 (MQ=255)
                                                                                                                     gcCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAacccac                         <  6:328898/149‑1 (MQ=255)
                                                                                                                     gcCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAacccac                         >  3:269242/1‑149 (MQ=255)
                                                                                                                             cGGCCTCTTCGGGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata                 <  3:31179/149‑1 (MQ=255)
                                                                                                                             cGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata                 <  3:26403/149‑1 (MQ=255)
                                                                                                                                 ctctTCGCGGGTAAACCCGCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGTATTTACCCGCGAAGAGGCCGGCGCAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAg                <  3:365139/146‑1 (MQ=11)
                                                                                                                                 ctctTCGCGGGTAAACCCGCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAg                >  4:365139/1‑146 (MQ=11)
                                                                                                                                  tctTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacggaacgccgccccctgctc               >  5:281429‑M1/1‑14 (MQ=255)
                                                                                                                                  tctTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctc               >  5:377753‑M1/1‑14 (MQ=255)
                                                                                                                                  tctTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctggaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacggaacgccgccccctgctc               >  3:224464‑M1/1‑14 (MQ=255)
                                                                                                                                    ttCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgt             >  4:209028‑M1/1‑12 (MQ=255)
                                                                                                                                    ttCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGTAGCGGGTTTACCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGc            <  2:125566/147‑1 (MQ=255)
                                                                                                                                    ttCGCGGGTAAACCCGCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTg          >  6:115277/1‑149 (MQ=17)
                                                                                                                                      cgcgGTTAAATCCGCTCATACCGGCGCGGACCGTGCGCGGTCC‑‑‑CCCTTAGTAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt           <  1:189723/146‑1 (MQ=39)
                                                                                                                                      cgcgGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTg          <  4:269242/147‑1 (MQ=255)
                                                                                                                                       gcgGGTAACcccgctcctacggggccccgcgcacggtccgcgcctgtcggagcgtatttacccgcgatgtggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgg           <  1:125566‑M1/148‑140 (MQ=255)
                                                                                                                                       gcgGGTAAAcccgctcctccgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacggaacgccgccccctgctcgtgg           <  4:224464‑M1/148‑140 (MQ=255)
                                                                                                                                       gcgGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacggaacgccgccccctgctcgtgg           <  6:281429‑M1/148‑140 (MQ=255)
                                                                                                                                       gcgGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgg           <  7:275669‑M1/148‑140 (MQ=255)
                                                                                                                                         gggTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtc        >  8:332671‑M1/1‑7 (MQ=255)
                                                                                                                                            tAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttc     <  3:209028‑M1/149‑146 (MQ=255)
                                                                                                                                            tAAATCCGCTCCTACAGGCGCGGACCGTGCTCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTgg         <  8:192753/142‑1 (MQ=255)
                                                                                                                                            tAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTAAAGTCGCTGGCagatcg  >  7:192753/1‑144 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
CCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTG  >  NC_002947/4896255‑4896543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.