New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5432474 =64 (1.090)3 (0.050) 3/248 NT 4.7% coding (328/519 nt) PP_5713 hypothetical protein
?NC_002947 5432525 = 60 (1.080)coding (379/519 nt) PP_5713 hypothetical protein
Rejected: Frequency below/above cutoff threshold.

TCATTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTA  >  NC_002947/5432329‑5432620
                                                                                                                                                 |                                                                                                                                                  
ccattcatcgtattgccccggccagtgaagctcgatctgcctgcctcaataggaacgtgatcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGc                                                                                                                                                 >  6:148747‑M1/146‑149 (MQ=255)
ccattcatcgtattgccccggccagtgaagctcgatctgcctgcctcaataggaacgtgatcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGc                                                                                                                                                 <  3:4680‑M1/4‑1 (MQ=255)
  attcatcgtattgccccggccagtgaagctcgatctgcctgcctcaataggtacgtgatcacttcgccgtcctcgacgttgagccaggctacccactcccccctcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGCTg                                                                                                                                               <  3:303588‑M1/6‑1 (MQ=255)
  aTTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTg                                                                                                                                               >  7:348514/1‑149 (MQ=255)
   ttcatcgtattgccccggccagtgaagctcgatctgcctgcctcaataggaacgtgatcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGCTgg                                                                                                                                              <  2:166748‑M1/7‑1 (MQ=255)
              ggACCAACGATCGCCTGCACTAACGCATCAGCATGCCAGGGCGACAGGAGCCCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGTCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGAt                                                                                                                                   <  8:268100/149‑1 (MQ=255)
                  cAACGATCGGCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAg                                                                                                                               <  7:129909/149‑1 (MQ=255)
                    aCGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACa                                                                                                                                      >  4:335530/1‑140 (MQ=255)
                    aCGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACa                                                                                                                                      <  3:335530/140‑1 (MQ=255)
                    aCGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGa                                                                                                                             >  4:4680/1‑149 (MQ=255)
                    aCGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGa                                                                                                                             >  6:249444/1‑149 (MQ=255)
                       aTCGCCTGCACTACCGCATCATCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACtt                                                                                                                          <  7:124831/149‑1 (MQ=255)
                               cACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCa                                                                                                                  <  8:348514/149‑1 (MQ=255)
                                aCTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCAt                                                                                                                 >  5:102657/1‑149 (MQ=255)
                                  tACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCt                                                                                                               >  3:52741/1‑149 (MQ=255)
                                     cGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTgcg                                                                                                            <  5:249444/149‑1 (MQ=255)
                                       cATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGcgcg                                                                                                          >  5:13491/1‑149 (MQ=255)
                                        aTCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGa                                                                                                         >  4:324486/1‑149 (MQ=255)
                                          cAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGaa                                                                                                                                <  3:273366/124‑1 (MQ=255)
                                          cAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGaa                                                                                                                                >  4:273366/1‑124 (MQ=255)
                                            gCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGAc                                                                                                                            >  2:140290/1‑126 (MQ=255)
                                              aTGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTAGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGa                                                                                                         >  2:60211/1‑143 (MQ=255)
                                              aTGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTAGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGa                                                                                                         <  1:60211/143‑1 (MQ=255)
                                                ataggaacgtgatcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCggg                                                                                                 >  4:94801‑M1/98‑149 (MQ=255)
                                                  catggCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTATCGAATACTCGAAAATCGAGCCGCGGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                               <  5:270644/146‑1 (MQ=255)
                                                  cAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                               >  2:238217/1‑149 (MQ=255)
                                                  cAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                               >  7:308880/1‑149 (MQ=255)
                                                        gcCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAgg                                                                                         >  7:69046/1‑149 (MQ=255)
                                                          ccGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGAt                                                                                                                                   <  2:275220/105‑1 (MQ=255)
                                                          ccGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGAt                                                                                                                                   >  1:275220/1‑105 (MQ=255)
                                                          ccGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGt                                                                                       >  6:362001/1‑149 (MQ=255)
                                                           atcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                               >  7:73659‑M1/87‑140 (MQ=255)
                                                           atcacttcgccttcctcgacgttgagccaggctacccactccccactcctgtgcggcgtatccgtgagggcgccgaccctgtagccCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                               <  8:73659‑M1/54‑1 (MQ=255)
                                                                  cAAGAAGCTAGGTTTCAGCCGCATTGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGccc                                                                               >  8:352789/1‑149 (MQ=255)
                                                                  cAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGccc                                                                               >  5:223569/1‑149 (MQ=255)
                                                                  cAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGccc                                                                               >  1:268766/1‑149 (MQ=255)
                                                                      aagCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCAc                                                                           <  6:13491/149‑1 (MQ=255)
                                                                      aagCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCAc                                                                           <  3:324486/149‑1 (MQ=255)
                                                                        gCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGgc                                                                                   <  4:83321/139‑1 (MQ=255)
                                                                        gCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGgc                                                                                   >  3:83321/1‑139 (MQ=255)
                                                                           aGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATa                                                                      >  7:215749/1‑149 (MQ=255)
                                                                             gATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcg                                                                    <  7:347399/149‑1 (MQ=255)
                                                                              aTTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcgc                                                                   <  2:268766/149‑1 (MQ=255)
                                                                                  aGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGca                                                               <  5:362001/149‑1 (MQ=255)
                                                                                    ccGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGca                                                               >  5:57844/1‑147 (MQ=255)
                                                                                     cGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTAc                                                                                            <  8:247182/117‑1 (MQ=255)
                                                                                     cGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTAc                                                                                            >  7:247182/1‑117 (MQ=255)
                                                                                      gCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAg                                                            >  7:291643/1‑148 (MQ=255)
                                                                                         aTGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagt                                                        >  6:54585/1‑149 (MQ=255)
                                                                                            gCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                     <  7:243591/149‑1 (MQ=255)
                                                                                            gCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtgg                                                      <  4:223904/148‑1 (MQ=255)
                                                                                             cTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                     >  1:164484/1‑148 (MQ=255)
                                                                                                tCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGTGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCTCAggaggggggagt                                                 >  8:78940/1‑149 (MQ=255)
                                                                                                    ggCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagtg                                                <  7:352789/146‑1 (MQ=255)
                                                                                                    ggCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagt                                                 <  8:308880/145‑1 (MQ=255)
                                                                                                    ggCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGt                                             <  6:102657/149‑1 (MQ=255)
                                                                                                     gCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTa                                            <  6:45086/149‑1 (MQ=255)
                                                                                                      cTTCTACTGGCATGCAGAGGTTAGCGAATTCTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGAGCAGCGGGGCTACAGGGTCGGCGCGCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGtcg                                           >  4:303588/1‑147 (MQ=255)
                                                                                                      cTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGAGAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAg                                           <  6:223569/149‑1 (MQ=255)
                                                                                                       ttCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagt                                                 <  1:52197/142‑1 (MQ=255)
                                                                                                       ttCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagt                                                 >  2:52197/1‑142 (MQ=255)
                                                                                                       ttCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGc                                          >  6:266431/1‑149 (MQ=255)
                                                                                                             tGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTggat                                    >  8:198830/1‑147 (MQ=255)
                                                                                                                    cAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGTACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGTAGTGGGTAGCCTGGCTCAACGTc                             <  8:69046/149‑1 (MQ=255)
                                                                                                                             gCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAgg                     <  8:215749/148‑1 (MQ=255)
                                                                                                                             gCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGc                    <  2:164484/149‑1 (MQ=255)
                                                                                                                                aaTACTGGAAAATCGAGCCGCTGGCACTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagt                                                 >  8:100554/1‑117 (MQ=255)
                                                                                                                                aaTACTGGAAAATCGAGCCGCTGGCACTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagt                                                 <  7:100554/117‑1 (MQ=255)
                                                                                                                                     tGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcgc                                                                   <  4:367360/94‑1 (MQ=255)
                                                                                                                                     tGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcgc                                                                   >  3:367360/1‑94 (MQ=255)
                                                                                                                                       gAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATc           <  5:341364/148‑1 (MQ=255)
                                                                                                                                               aGCCGCTGGCGCTGACAGATGCAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTa  <  7:198830/149‑1 (MQ=255)
                                                                                                                                               aGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTa  <  4:52741/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TCATTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTA  >  NC_002947/5432329‑5432620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.