New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 253605	47 (0.800)	4 (0.070)	4/244	NT	8.4%	coding (1512/1731 nt)	PP_0203	dipeptidase
	?	NC_002947	= 253676	44 (0.800)					coding (1441/1731 nt)	PP_0203	dipeptidase

CGTTGGGAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATCCACCCCGACAAAAGTCAGCGAG  >  NC_002947/253529‑253824                                                                                                                                                    |                                                                                                                                                     cGTTGGGAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAg                                                                                                                                                     <  1:179510‑M2/149‑2 (MQ=255)     gggAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGCCCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggcca                                                                                                                                                 <  3:92913‑M2/149‑6 (MQ=255)      ggAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccac                                                                                                                                                <  5:247104‑M2/149‑7 (MQ=255)      ggAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccac                                                                                                                                                <  1:251330‑M2/149‑7 (MQ=255)          gATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGaa                                                                                                                                            <  1:269930/149‑1 (MQ=255)              gTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAgtgt                                                                                                                                        <  2:179510/149‑1 (MQ=255)                 cACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTg                                                                                                                                      <  7:212377/148‑1 (MQ=255)                          cgcgCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTATCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGAGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCggg                                                                                                                            >  3:295057/1‑149 (MQ=255)                           gcgcCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGt                                                                                                                           >  5:222845/1‑149 (MQ=255)                                 gccgAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCAttt                                                                                                                     <  1:10090/149‑1 (MQ=255)                                          ccGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGttt                                                                                                            >  3:305811/1‑149 (MQ=255)                                          ccGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGttt                                                                                                            >  3:185889/1‑149 (MQ=255)                                           cGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTg                                                                                                           >  7:278291/1‑149 (MQ=255)                                            gAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGt                                                                                                          <  8:25947/149‑1 (MQ=255)                                               cTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGt                                                                                                              <  5:337270/142‑1 (MQ=255)                                               cTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGt                                                                                                              >  6:337270/1‑142 (MQ=255)                                                           aCCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccaccgagaacctgggtatgaagcatgagttcggtacctcggccggcgcgacttcgg                                                                                           <  3:175366‑M2/149‑60 (MQ=255)                                                            cccAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCt                                                                                           <  4:272070/148‑1 (MQ=255)                                                             ccAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTg                                                                                         >  3:261247/1‑149 (MQ=255)                                                             ccAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCGCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTg                                                                                         <  2:251330/149‑1 (MQ=255)                                                               aGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGa                                                                                        >  7:163706/1‑148 (MQ=255)                                                               aGGTGCTCGGTGGCCACAGCGAGCAGTGCCTTGACACACTCGCCTTCAGGGTTGCGGTCCCTCGGCTCGTCCAGGCTGAAGTCGACGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGa                                                                                        <  8:163706/148‑1 (MQ=255)                                                                 gTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCg                                                                                     <  6:247104/149‑1 (MQ=255)                                                                  ttCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGt                                                                                    >  4:259352/1‑149 (MQ=255)                                                                        gTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGAt                                                                              >  3:306920/1‑149 (MQ=255)                                                                            ccACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGc                                                                          <  4:185889/149‑1 (MQ=255)                                                                             cacaGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCAGGGTCCATTTGCCCAGATTGTCGGCCAGATCATCCTTGATCCTGGCGATCGGCt                                                                         >  8:138666/1‑149 (MQ=255)                                                                              acaGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccaccgagaacctgggtatgaagcatgagttcggtacctcggccggcgcgacttcggtgcacgatcttcccaacgg                                                                        <  7:219036‑M2/149‑79 (MQ=255)                                                                                 gCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccaccgagaacctgggtatgaagcatgagttcggtacctcggccggcgcgacttcggtgcacgatcttcccaacggtgt                                                                     >  8:219036‑M2/1‑68 (MQ=255)                                                                                  cGAGCAGGGCCTTGACCCACTCGGCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTcccc                                                                    <  8:278291/149‑1 (MQ=255)                                                                                  cGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCa                                                                                                                        <  2:184717/97‑1 (MQ=255)                                                                                  cGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCa                                                                                                                        >  1:184717/1‑97 (MQ=255)                                                                                               gACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCt                                                                   <  4:107400/137‑1 (MQ=255)                                                                                               gACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATgcgc                                                        <  4:305811/148‑1 (MQ=255)                                                                                                aCCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAg                                                      <  1:221493/149‑1 (MQ=255)                                                                                                  ccACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGCCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGGCCATTTGCCCAGTTTGTCGGCCAGTTCAACCTTGATCCTGGCCATCGGCTTCCCCTTGGCAATGCCCaca                                                     >  4:78631/1‑146 (MQ=255)                                                                                                   gaCTCGCCTTCAGTGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGa                                                                                        <  8:322459/111‑1 (MQ=255)                                                                                                    aCTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTgg                                                                <  5:169863/135‑1 (MQ=255)                                                                                                    aCTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTAGCTTTGCCGGGTCCATTTGCCCAGTTAGTCGGCCAGTTCATCCTTGATCGTGGCGATCGCCTTCCCCTTgc                                                                >  6:169863/1‑134 (MQ=255)                                                                                                        gCCTTCAGGGTTGCGGTACCTCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGGTTTGCCGGGTCCATTTGGGCAGTGTGTAGGCCTGTTCATCCTTGATCGTGGGGATCGGCTTCCCCGTGGGAATGCGCTGAGTCAACg                                              >  6:309334/1‑149 (MQ=255)                                                                                                        gCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCAc                                                >  1:297061/1‑147 (MQ=255)                                                                                                        gCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCAc                                                <  2:297061/147‑1 (MQ=255)                                                                                                             cAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTAATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGt                                         >  3:233644/1‑149 (MQ=255)                                                                                                              aGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGt                                         <  6:342257/148‑1 (MQ=255)                                                                                                              aGGGTTGCGGTACATCGGCTCGTCCAGGCTGAACTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGtt                                        <  5:309334/149‑1 (MQ=255)                                                                                                               gggTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAggccaccgagaacctgggtatgaagcatgagttcggtacctcggccggcgcgacttcggtgcacgatcttcccaacggtgtgcaatttggcctggccatgccggaggtgaa                                       >  4:175366‑M2/1‑38 (MQ=255)                                                                                                                  ttGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCAc                                    <  4:92913/149‑1 (MQ=255)                                                                                                                       gTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCACAGTTTGTCGGCCAGTTAATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCtt                               >  2:321205/1‑149 (MQ=255)                                                                                                                           aTCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTc                           <  6:222845/149‑1 (MQ=255)                                                                                                                              ggCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATc                        <  4:306920/149‑1 (MQ=255)                                                                                                                                ctagTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCGTTGATCGTGGCGAACGGCTTCCCCTTGGGAATGCGCAGATTCACCGCAAGTTTCACGCCTTTTTAATcaa                      >  2:130099/4‑147 (MQ=255)                                                                                                                                       aGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATCCACCCCGa                >  4:26464/1‑148 (MQ=255)                                                                                                                                           tGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCGTTTTCATCCACCCCGACaa             >  5:287692/1‑147 (MQ=255)                                                                                                                                               gTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATCCACCCCGACAAAAGt         >  7:29067/1‑147 (MQ=255)                                                                                                                                                tCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATCCACCCCGACAAAAGTCAg      <  8:29067/149‑1 (MQ=255)                                                                                                                                                    aGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTATCATCCACCCCGACAAAAGTCAGCGAg  <  7:138666/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGTTGGGAAGATCGTGCACCGAAGTCGCGCCGGCCGAGGTACCGAACTCATGCTTCATACCCAGGTTCTCGGTGGCCACAGCGAGCAGGGCCTTGACCCACTCGCCTTCAGGGTTGCGGTACATCGGCTCGTCCAGGCTGAAGTCGAAGGCCACCGAAGTGTTGCTTTGCCGGGTCCATTTGCCCAGTTTGTCGGCCAGTTCATCCTTGATCGTGGCGATCGGCTTCCCCTTGGGAATGCGCAGATTCACCGCCAGTTTCACGCCTTTTTCATCCACCCCGACAAAAGTCAGCGAG  >  NC_002947/253529‑253824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.