New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 444405	48 (0.820)	4 (0.070)	4/252	NT	8.4%	coding (568/681 nt)	bioD	dethiobiotin synthetase
	?	NC_002947	= 444448	41 (0.720)					coding (611/681 nt)	bioD	dethiobiotin synthetase

GCCATGCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACC  >  NC_002947/444301‑444596                                                                                                                                                    |                                                                                                                                                        gCCATGCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGg                                                                                                                                                        <  1:347317‑M2/149‑2 (MQ=255)  ccATGCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGgg                                                                                                                                                       <  3:246402‑M2/149‑3 (MQ=255)   cATGCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGggt                                                                                                                                                      >  3:361157‑M2/1‑146 (MQ=255)      gCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTcc                                                                                                                                                   >  7:267738/1‑149 (MQ=255)       ccTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTcc                                                                                                                                                   <  3:279458/148‑1 (MQ=255)         ttGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAGGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGg                                                                                                                                                        <  8:158795‑M2/141‑2 (MQ=255)         ttGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAGGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGg                                                                                                                                                        >  7:158795‑M2/1‑140 (MQ=255)                gcgcCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAg                                                                                                                                         >  4:7765/1‑149 (MQ=255)                  gcCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCa                                                                                                                                       <  8:267738/149‑1 (MQ=255)                       aGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCa                                                                                                                                  <  6:330167/149‑1 (MQ=255)                       aGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCa                                                                                                                                  <  6:335750/149‑1 (MQ=255)                       aGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTACCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCa                                                                                                                                  <  8:290855/149‑1 (MQ=255)                           aTCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGc                                                                                                                              <  6:288546/149‑1 (MQ=255)                            tCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGcc                                                                                                                             >  7:164324/1‑149 (MQ=255)                                      tGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACAtggtg                                                                                                                    <  2:333436/148‑1 (MQ=255)                                       gggCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑c                                                                                                               >  4:161922/1‑149 (MQ=255)                                        ggCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑Ct                                                                                                              <  2:200935/149‑1 (MQ=255)                                          cTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑Ct                                                                                                              >  3:139768/1‑147 (MQ=255)                                          cTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGa                                                                                                            <  8:164324/149‑1 (MQ=255)                                           tGCAGTTGGCGGGTTGGGTAGCAAACATAATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCATCCTTGCAGAGAGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAg                                                                                                           >  3:216843/1‑149 (MQ=255)                                                ttGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCt                                                                                                      <  2:347317/149‑1 (MQ=255)                                                       gTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTg                                                                                               >  6:162274/1‑149 (MQ=255)                                                               gCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGTCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATctgct                                                                                       <  7:39090/149‑1 (MQ=255)                                                                cAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAATCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATctgctg                                                                                      <  4:139768/149‑1 (MQ=255)                                                                  aaCATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGa                                                                                    >  4:193912/1‑149 (MQ=255)                                                                        atcGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGt                                                                               <  3:193912/148‑1 (MQ=255)                                                                            aGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGtt                                                                          <  3:161922/149‑1 (MQ=255)                                                                                gcgcACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAg                                                                      <  3:7765/149‑1 (MQ=255)                                                                                gcgcACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAg                                                                      <  4:246402/149‑1 (MQ=255)                                                                                 cgcACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAgg                                                                     >  3:354709/1‑149 (MQ=255)                                                                                    aCCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGtt                                                                          <  8:10370/141‑1 (MQ=255)                                                                                    aCCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGAAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGtt                                                                          >  7:10370/1‑141 (MQ=255)                                                                                      cTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATctgc                                                                                        >  4:249106/1‑125 (MQ=255)                                                                                      cTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATctgc                                                                                        <  3:249106/125‑1 (MQ=255)                                                                                      cTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCgg                                                                >  5:108146/1‑149 (MQ=255)                                                                                           gCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGAGTAGTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGcc                                                              >  1:303672/1‑149 (MQ=255)                                                                                             cTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTc                                                         >  7:142615/1‑149 (MQ=255)                                                                                                gAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTcgc                                                       <  4:354709/148‑1 (MQ=255)                                                                                                 aaGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGggttctcttccaggcgtgaggtgcgcggctcgatgatgtttgctacccaacccgccaactgcagcccatcacgctcgatcgcttcggcgctgagc                                                          <  4:90148‑M2/147‑96 (MQ=255)                                                                                                 aaGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCgg                                                     <  5:162274/149‑1 (MQ=255)                                                                                                     gaACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGggttctcttccaggcgtgaggtgcgcggctcgatgatgtttgctacccaacccgccaactgcagcccatcacgctcgatcgcttcggcgctgagcaaggca                                                    <  3:297818‑M2/149‑102 (MQ=255)                                                                                                     gaACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTa                                                  >  2:141069/1‑148 (MQ=255)                                                                                                      aaCCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGggttctcttccaggcgtgaggtgcgcggctcgatgatgtttgctacccaacccgccaactgcagcccatcacgctcgatcgcttcggcgctgagcaaggcat                                                   >  4:297818‑M2/1‑47 (MQ=255)                                                                                                            gCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGggttctcttccaggcgtgaggtgcgcggctcgatgatgtttgctacccaacccgccaactgcagcccatcacgctcgatcgcttcggcgctgagcaaggcatggctga                                             >  3:90148‑M2/1‑41 (MQ=255)                                                                                                              cAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAACTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTc                                         >  1:87565/1‑148 (MQ=255)                                                                                                                  cTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc                                     >  5:303807/1‑148 (MQ=255)                                                                                                                  cTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCAGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCTGGTACTCCCGCGCCCAca                                    >  8:240219/1‑148 (MQ=255)                                                                                                                      cAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAgg                                 <  5:230498/148‑1 (MQ=255)                                                                                                                                   ggCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGtt                   <  2:87565/149‑1 (MQ=255)                                                                                                                                     cgcCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTtgt                 <  6:108146/149‑1 (MQ=255)                                                                                                                                         ttaccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGgc             >  3:156709/4‑149 (MQ=255)                                                                                                                                             cTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGACCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg         >  1:92559/1‑149 (MQ=255)                                                                                                                                                gggCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCggg        <  2:303672/147‑1 (MQ=255)                                                                                                                                                    gggTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTAcc  <  8:77894/149‑1 (MQ=21)                                                                                                                                                    |                                                                                                                                                        GCCATGCCTTGCTCAGCGCCGAAGCGATCGAGCGTGATGGGCTGCAGTTGGCGGGTTGGGTAGCAAACATCATCGAGCCGCGCACCTCACGCCTGGAAGAGAACCTGGCCAGCCTTGCAGAGCGCCTGCCGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTG‑G‑‑CTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACC  >  NC_002947/444301‑444596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.