New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 742597 = | NA (NA) | 6 (0.100) | 5/256 | NT | NA | coding (698/1422 nt) | PP_0635 | group II intron‑encoding maturase |
? | NC_002947 | 742657 = | NA (NA) | coding (758/1422 nt) | PP_0635 | group II intron‑encoding maturase |
AGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGAC > NC_002947/742522‑742670 | agggctgggTCAAAGATAAGTGCGTACTTAGGCTTATTGGTTGCTAGCTTGAAGCCGGGATTTTGTCGGGCGGTGTGGTTAGCCAACGGCAGGAGGGGAGGCCGTAATGCGGGCGGCTTTCGCGGTTGCTGTGGAATATGCTGGTcgag < 2:121267/143‑2 (MQ=0) | AGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGAC > NC_002947/742522‑742670 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |