New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 996204 =74 (1.260)4 (0.070) 4/244 NT 5.8% coding (1392/2550 nt) PP_0860 sulfite reductase flavoprotein subunit
?NC_002947 996265 = 61 (1.110)coding (1331/2550 nt) PP_0860 sulfite reductase flavoprotein subunit

CGAGCGAAACCGCAGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAG  >  NC_002947/996118‑996411
                                                                                                                                                   |                                                                                                                                                     
cgaGCGAAACCGCAGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGTTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCTCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTcac                                                                                                                                                      <  7:198742/149‑1 (MQ=255)
        aCCGCAGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAaga                                                                                                                                              <  1:37743/149‑1 (MQ=255)
          cGCAGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAgc                                                                                                                                            <  8:139677/149‑1 (MQ=255)
             aGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAgcgcg                                                                                                                                         <  1:19497/149‑1 (MQ=255)
                  tGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATg                                                                                                                                    >  6:287128/1‑149 (MQ=255)
                     gggTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCTCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGc                                                                                                                                 <  6:51659/149‑1 (MQ=255)
                       gTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCt                                                                                                                               >  3:8102/1‑149 (MQ=255)
                           tGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGgcg                                                                                                                           >  6:25366/1‑149 (MQ=255)
                               ttgccgagctgggtggaaacgacctgcgccaggcccatcgcgcgctcttcgtggtGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTca                                                                                                                                                       <  5:380330‑M1/62‑1 (MQ=255)
                               ttgccgagctgggtggaaacgacctgcgccaggcccatcgcgcgctcttcgtggtGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTca                                                                                                                                                       >  6:380330‑M1/56‑117 (MQ=255)
                               gATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCGCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAgg                                                                                                                       >  4:22723/1‑149 (MQ=255)
                               gATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAgg                                                                                                                       >  1:186214/1‑149 (MQ=255)
                               gATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAgg                                                                                                                       >  4:27591/1‑149 (MQ=255)
                               gATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAgg                                                                                                                       >  7:172488/1‑149 (MQ=255)
                                    ccGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGtt                                                                                                                  <  6:245285/149‑1 (MQ=255)
                                    ccGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGtt                                                                                                                  <  8:150207/149‑1 (MQ=255)
                                     cGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGGGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAgcgc                                                                                                                                          <  2:273064/124‑1 (MQ=255)
                                     cGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGGGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAgcgc                                                                                                                                          >  1:273064/1‑124 (MQ=255)
                                     cGAGGGCGAGCAGGGCATAGTTGAGGATGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGttt                                                                                                                 <  8:128534/149‑1 (MQ=255)
                                        gggCGAGCAGGGCATAGTTGAGGTTGGTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCa                                                                                                              <  4:308726/149‑1 (MQ=255)
                                            gAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCa                                                                                                          >  2:282980/1‑149 (MQ=255)
                                              gCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGc                                                                                                        <  4:21894/149‑1 (MQ=255)
                                               cAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCt                                                                                                       >  4:185118/1‑149 (MQ=255)
                                                  ggCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCGCCACGAAGAGCGCGCGATGGGCCTGGCGCTGGTCGGTTTCCCCCAGCTCgg                                                                                                    >  8:180655/1‑149 (MQ=255)
                                                    cATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGc                                                                                                   >  8:85221/1‑148 (MQ=255)
                                                       aGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCATGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAgg                                                                                               >  7:299183/1‑149 (MQ=255)
                                                           gAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGgcg‑‑‑c                                                                                        >  4:94584/1‑149 (MQ=255)
                                                            aGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGgcg‑‑‑cg                                                                                       <  5:294363/149‑1 (MQ=255)
                                                               ttgttgAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCAc                                                                                    <  1:196173/149‑1 (MQ=255)
                                                               ttgttgAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCAc                                                                                    <  8:172488/149‑1 (MQ=255)
                                                                  ttgAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTg                                                                                 <  4:8102/149‑1 (MQ=255)
                                                                     aGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGgcgc                                                                                                                          >  5:379400/1‑108 (MQ=255)
                                                                     aGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGgcgc                                                                                                                          <  6:379400/108‑1 (MQ=255)
                                                                     aGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAAc                                                                              <  2:189445/149‑1 (MQ=255)
                                                                     aGTGCCCAAGGCTGGCCGAGTACCATGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAAc                                                                              <  8:299183/149‑1 (MQ=255)
                                                                         cccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACggg                                                                           <  1:282980/148‑1 (MQ=255)
                                                                         cccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGc                                                                          <  2:327345/149‑1 (MQ=255)
                                                                          ccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCa                                                                         <  3:22723/149‑1 (MQ=255)
                                                                          ccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCa                                                                         <  3:27591/149‑1 (MQ=255)
                                                                          ccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAg                                                                        >  5:126331/1‑149 (MQ=255)
                                                                          ccAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAg                                                                        <  6:126331/149‑1 (MQ=255)
                                                                           cAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAg                                                                        <  5:25366/149‑1 (MQ=255)
                                                                                cTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAg                                                                   >  6:95041/1‑149 (MQ=255)
                                                                                   gCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGctg                                                                >  6:223838/1‑149 (MQ=255)
                                                                                     tgagtaccttcggcgacggcgaagcgcccgacagcgctcgcgccttcgagcgcaaggtactcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTCCACCCAGCTCGGCaa                                                                                                 >  6:380330‑M2/63‑117 (MQ=255)
                                                                                     tgagtaccttcggcgacggcgaagcgcccgacagcgctcgcgccttcgagcgcaaggtactcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTCCACCCAGCTCGGCaa                                                                                                 <  5:380330‑M2/55‑1 (MQ=255)
                                                                                     cGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGctgcc                                                              >  2:129184/1‑149 (MQ=255)
                                                                                      gagtaccttcggcgacggcgaagcgcccgacagcgctcgcgccttcgagcgcaaggtactcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGctgcct                                                             >  6:79084‑M2/62‑149 (MQ=255)
                                                                                            CTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGc                                                                                                                                 <  6:294915‑M1/78‑1 (MQ=255)
                                                                                            CTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGc                                                                                                                                 >  5:294915‑M1/1‑78 (MQ=255)
                                                                                               gcgcTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAgctgct                                                    >  5:314409/1‑149 (MQ=255)
                                                                                                 gcgacggcgaagcgcccgacagcgctcgcgccttcgagcgcaaggtactcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCg                                                  <  5:79084‑M2/99‑1 (MQ=255)
                                                                                                 gcTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCg                                                  <  7:85221/149‑1 (MQ=255)
                                                                                                  cTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCgg                                                 >  1:67811/1‑149 (MQ=255)
                                                                                                   tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGgc                                                >  5:51634/1‑149 (MQ=255)
                                                                                                   tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGgc                                                >  6:45483/1‑149 (MQ=255)
                                                                                                   tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGgc                                                >  4:133604/1‑149 (MQ=255)
                                                                                                       aGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGctc                                            >  2:45424/1‑149 (MQ=255)
                                                                                                         gcgcGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTg                                          >  5:296776/1‑149 (MQ=255)
                                                                                                             gAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGGTAGGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGc                                         >  1:119773/1‑149 (MQ=255)
                                                                                                             gAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAg                                      <  2:186214/149‑1 (MQ=255)
                                                                                                             gAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCAGCAGCTGCTCGGCGCTCTGCCAg                                      <  3:185118/149‑1 (MQ=255)
                                                                                                                  cTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCaa                                 <  7:180655/149‑1 (MQ=255)
                                                                                                                   tGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAAc                                >  5:362248/1‑149 (MQ=255)
                                                                                                                       gggCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGtt                            >  3:367911/1‑149 (MQ=255)
                                                                                                                        ggCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTc                           <  1:45424/149‑1 (MQ=255)
                                                                                                                         gcgcTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCg                          >  4:242622/1‑149 (MQ=255)
                                                                                                                                  cgtcgccgAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCa                 <  5:287128/149‑1 (MQ=255)
                                                                                                                                  cgtcgccgAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCa                 >  5:284941/1‑149 (MQ=255)
                                                                                                                                   gtcgccgAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCAc                <  5:223838/149‑1 (MQ=255)
                                                                                                                                      gccgAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACt                               <  7:256279/131‑1 (MQ=255)
                                                                                                                                      gccgAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACt                               >  8:256279/1‑131 (MQ=255)
                                                                                                                                         gAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTctggc          <  6:362248/149‑1 (MQ=255)
                                                                                                                                         gAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTctggc          >  6:22958/1‑149 (MQ=255)
                                                                                                                                                ctcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCTGGCTGGCaaa   <  2:67811‑M2/146‑1 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCaa                                 <  7:230274‑M2/116‑1 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCaa                                 >  8:230274‑M2/3‑118 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCg                          <  1:75440‑M2/123‑1 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCg                          >  2:75440‑M2/3‑125 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCtggctggc      <  7:140096‑M2/143‑1 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCtggctggc      >  8:140096‑M2/3‑145 (MQ=255)
                                                                                                                                                 tcACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAg  >  6:301709‑M2/3‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGAGCGAAACCGCAGAAGTGCGGGTACTGACGATCACCGAGGGCGAGCAGGGCATAGTTGAGGTTGTTGAGTGCCCAAGGCTGGCCGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACGAAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCG‑‑‑CGCACCTGAACGGGCAGGCCAGCTGCCTGCAGCTGCTCGGCGCTCTGCCAGGCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAG  >  NC_002947/996118‑996411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.