New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1034650 = | 54 (0.920) | 3 (0.050) | 3/250 | NT | 5.9% | coding (687/1158 nt) | PP_0892 | phospholipase family protein |
? | NC_002947 | 1034714 = | 45 (0.800) | coding (751/1158 nt) | PP_0892 | phospholipase family protein |
TCGCTTATGCCGACGCCCGCCAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGC > NC_002947/1034568‑1034862 | tCGCTTATGCCGACGCCCGCCAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAg > 3:157267/1‑149 (MQ=255) gggtagtaacgatgcccggcgtagcgtaccgaggggtgatcggtacgcgggccggtcaacaacagacgcacgtccaggcccttGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCaa > 6:315713‑M1/84‑149 (MQ=255) ccGACGCCCGCCAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGGGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGAc < 7:234763/149‑1 (MQ=255) aCGCCCGCCAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTg > 7:34334/1‑149 (MQ=255) cgcccgccAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGc < 5:195651/149‑1 (MQ=255) ccgccAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTc > 6:183920/1‑149 (MQ=255) cAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCtgtt < 4:157267/149‑1 (MQ=255) gCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCtgttgt < 8:34334/149‑1 (MQ=255) cACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTgttgtt < 6:25990/149‑1 (MQ=255) aCCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAggg < 1:364657/127‑1 (MQ=255) aCCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAggg > 2:364657/1‑127 (MQ=255) ggACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGt > 2:210035/1‑132 (MQ=255) ggACATCCAGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCTGCCGGGCTGCCAGCAAGGGCCTGGACGt < 1:210035/133‑1 (MQ=255) cTGCACGCGCTGGTACGGGCGCTGAACAGGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCcgc > 1:209851/1‑149 (MQ=255) gtacgcgggccggtcaacaacagacgcacgtccaggcccttGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAgg < 7:210849‑M1/68‑1 (MQ=255) gtacgcgggccggtcaacaacagacgcacgtccaggcccttGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAgg > 8:210849‑M1/42‑109 (MQ=255) gcTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCGGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGAGGTGCGTCTGTTGTTGACCGGCCCGCGTACCGAt > 4:226193/1‑148 (MQ=255) cGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCt < 6:162345/148‑1 (MQ=255) gggCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCg > 6:283871/1‑149 (MQ=255) aaCA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgcta > 5:18007/1‑149 (MQ=255) a‑GCGGTCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgctacgc > 6:222444/1‑149 (MQ=255) ggCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCgg < 2:209851/149‑1 (MQ=255) ggCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCgg < 4:305635/149‑1 (MQ=255) gCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCggg > 3:152200/1‑149 (MQ=255) gAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGCGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATc < 4:129399/149‑1 (MQ=255) aCGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTTCCAGCAAGGGCCTGGACGTGCGTATGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGtt < 6:61827/149‑1 (MQ=255) aCGGGTGGGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGt < 6:142204/148‑1 (MQ=255) cGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTta < 5:283871/149‑1 (MQ=255) ccttgctggcagcccggcgcaacgaccggcgcacgctccaggtcggcaagaagtacggcgtggccagcAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTAc < 7:210849‑M2/41‑1 (MQ=255) ccttgctggcagcccggcgcaacgaccggcgcacgctccaggtcggcaagaagtacggcgtggccagcAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTAc > 8:210849‑M2/69‑109 (MQ=255) ttgctggcagcccggcgcaacgaccggcgcacgctccaggtcggcaagaagtacggcgtggccagcAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTAccc > 6:315713‑M2/67‑149 (MQ=255) GCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCcgc < 6:74826‑M1/149‑1 (MQ=255) cACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGt > 8:243605/1‑149 (MQ=255) cACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGt > 4:260007/1‑149 (MQ=255) gTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTgcgcg > 4:24589/1‑149 (MQ=255) aCTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGcgcgcg > 5:16410/1‑149 (MQ=255) ttcttGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCggg > 5:246903/1‑149 (MQ=255) ttcttGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCggg > 5:287604/1‑149 (MQ=255) ttcttGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGCTACGCTACGCCGGGCATCGTTACTACCCGCTTCTGATGCGCGCggg > 8:239081/1‑149 (MQ=255) cttGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCg > 7:25339/1‑149 (MQ=255) tGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTa > 1:70967/1‑149 (MQ=255) ccGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTAc < 7:243605/148‑1 (MQ=255) cGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACg > 3:167065/1‑148 (MQ=255) tGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGAtttt > 7:6617/1‑149 (MQ=255) tGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGAtttt > 1:13875/1‑149 (MQ=255) ggAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc < 8:25339/149‑1 (MQ=255) gAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc < 6:328513/148‑1 (MQ=255) gAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc < 6:246903/148‑1 (MQ=255) gAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc > 5:328513/1‑148 (MQ=255) gAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc < 8:237875/148‑1 (MQ=255) tGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTAc < 4:152200/149‑1 (MQ=255) gcCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAg > 4:94845/1‑149 (MQ=255) cGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGcc < 3:260007/149‑1 (MQ=255) gTTGC‑GCCAGGCTGCCAGCAAGGGCCTGGAAGTGCGTCTGTTGATGACCGGCCCGCGTACCGATCACCCCTCGGAACGCTACGCCGGGCATCGTTACGACCCGCGTCAGTTGAGCGCGGGCGTACGGATTTTCGAGTACAAGCCGTGCt > 4:211125/1‑149 (MQ=255) ttGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCtt > 7:198721/1‑149 (MQ=255) gggCTGCCAGCAAGGGCCTGGACGTGCGGCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCAc < 8:198721/149‑1 (MQ=255) agcAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGAt < 5:183920‑M2/146‑1 (MQ=255) gcAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATg > 6:182600‑M2/3‑149 (MQ=255) aaGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGc > 7:186898/1‑149 (MQ=255) | TCGCTTATGCCGACGCCCGCCAGCACCAGGACATCCTGCACGCGCTGGTACGGGCGCTGAACA‑GCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGC‑GCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGC > NC_002947/1034568‑1034862 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |