New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1748247 | 49 (0.830) | 3 (0.050) | 3/244 | NT | 6.0% | coding (421/438 nt) | PP_1548 | hypothetical protein |
? | NC_002947 | = 1748274 | 49 (0.890) | coding (394/438 nt) | PP_1548 | hypothetical protein |
GCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGATGCGGTG > NC_002947/1748128‑1748418 | gcTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTct > 5:34154‑M2/1‑147 (MQ=255) gcTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTct > 3:202004‑M2/1‑147 (MQ=255) gTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTctcaa > 8:293767‑M2/1‑142 (MQ=255) gTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTctc < 7:293767‑M2/145‑4 (MQ=255) tggCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGcc < 6:272349/149‑1 (MQ=255) cAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCttt < 8:126427/149‑1 (MQ=255) aGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCtttt > 7:282588/1‑149 (MQ=255) ggCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCtttt > 2:150434/1‑148 (MQ=255) cATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTtcgtc > 7:19192/1‑148 (MQ=255) tGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGAt > 3:106646/1‑149 (MQ=255) ccGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCg > 8:336768/1‑149 (MQ=255) tCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAg > 7:158652/1‑149 (MQ=255) aTGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATg < 8:282588/149‑1 (MQ=255) gccaCACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCa < 3:340775/149‑1 (MQ=255) gccaCACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCa > 6:107156/1‑149 (MQ=255) acacGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGa > 6:363905/1‑149 (MQ=255) cacGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGAc < 8:158652/149‑1 (MQ=255) acgacgGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCt < 6:332297/105‑1 (MQ=255) acgacgGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCt > 5:332297/1‑105 (MQ=255) cgACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTctcaaggactatctgtgatccgtatcgcatccttcgggatcatg < 3:104337‑M2/119‑45 (MQ=255) cgACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTctcaaggactatctgtgatccgtatcgcatccttcgggatcatg > 4:104337‑M2/1‑75 (MQ=255) tGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGtt < 2:118164/135‑1 (MQ=255) tGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGtt > 1:118164/1‑135 (MQ=255) gATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGc > 6:348761/1‑149 (MQ=255) tCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCATCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGctt < 1:150434/149‑1 (MQ=255) cGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGcttctt > 2:295680/1‑149 (MQ=255) aaGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATgg < 2:159236/138‑1 (MQ=255) aaGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATgg > 1:159236/1‑138 (MQ=255) gATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGACGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGc < 2:308548/149‑1 (MQ=255) gCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGa < 7:336768/148‑1 (MQ=255) ggATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTgcgc > 4:351240/1‑147 (MQ=255) ggATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCa < 5:107156/149‑1 (MQ=255) gATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAg > 4:351997/1‑149 (MQ=255) cacaGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGc > 4:270317/1‑125 (MQ=255) cacaGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGc < 3:270317/125‑1 (MQ=255) acaGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTACTTTTAGTCGATGTCGCCCGAGGCATCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCt > 3:21266/1‑149 (MQ=255) caGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCtt > 4:3570/1‑149 (MQ=255) aGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCttt < 5:348761/149‑1 (MQ=255) gATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTc < 5:124829/149‑1 (MQ=255) aTAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTctcaaggactatctgtgatccgtatcgcatccttcgggatcatggtcgccgccgtcgtgtggctggccatgcgcggcatcgactacgggacatgcgcctggtacggccac < 4:217253‑M2/149‑111 (MQ=255) aTAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCttt > 8:100885/1‑147 (MQ=255) aTAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCa < 1:295680/149‑1 (MQ=255) aGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCa > 7:179693/1‑93 (MQ=255) aGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCa < 8:179693/93‑1 (MQ=255) gTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGtt > 8:49822/1‑149 (MQ=255) cTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTcc < 3:3570/148‑1 (MQ=255) cTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCt > 2:90975/1‑149 (MQ=255) cTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCt > 1:245576/1‑149 (MQ=255) aggctgaggcCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTtctc < 3:351240/149‑1 (MQ=255) ccATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATg > 3:43772/1‑149 (MQ=255) tCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATgcgc < 5:363905/149‑1 (MQ=255) gCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCAGCTTCTTCAGGCGAGTGCGCAAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAg > 1:356023/1‑148 (MQ=255) cTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGa > 6:268511/1‑149 (MQ=255) ttCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGAt > 1:325841/1‑149 (MQ=255) ccGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGTCGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGATGCgg < 6:223845/149‑1 (MQ=255) ccGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGt > 5:219925/1‑119 (MQ=255) ccGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGt < 6:219925/119‑1 (MQ=255) gACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGATGCGGTg < 2:245576/149‑1 (MQ=255) | GCTCGGTCTGGTGGCCGTACCAGGCGCATGTCCCGTAGTCGATGCCGCGCATGGCCAGCCACACGACGGCGGCGACCATGATCCCGAAGGATGCGATACGGATCACAGATAGTCCTTGAGGCTGAGGCCCATCAGCTTCGCCGACTTCTCAAGGACGGCCATTTCCTTTTCGTCGATGTCGCCCGAGGCCTCGGCGATGGTCAGCATGACGTTGATAACGATGGCCGCTTCTTCAGGCGAGTGCGCCAGGTCTTTCAGTTCCTTCTCGGCGTTCATGCGCAGGATGCGGTG > NC_002947/1748128‑1748418 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |