New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2033636 = | NA (NA) | 4 (0.070) | 4/248 | NT | 100% | coding (1117/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
? | NC_002947 | 2033644 = | 0 (0.000) | coding (1125/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
GTGGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCT > NC_002947/2033497‑2033675 | gtggtggtcggccaccgggttgaagctcaccaccggcacgatgaaatcggccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttCa < 7:20318‑M2/2‑1 (MQ=255) tggtcggccaccgggttgaagctcaccaccggcacgatgaaatcggccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttCACCgg < 8:12555‑M2/6‑1 (MQ=255) ggtcggccaccgggttgaagctcaccaccggcacgatgaaatcggccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttCACCggg > 5:265095‑M2/143‑149 (MQ=255) ggtcggccaccgggttgaagctcaccaccggcacgatgaaatcggccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttCACCggg > 6:129197‑M2/143‑149 (MQ=255) gccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgaagaccgaCACCGGGCCGGTGATCTggg > 5:79412‑M2/99‑118 (MQ=255) gccggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgaagaccgaCACCGGGCCGGTGATCTggg < 6:79412‑M2/20‑1 (MQ=255) ctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgaagaccgaCACCGGGCCGGTGATCTGGGGCGGCGTGGGCt > 7:214193‑M2/79‑110 (MQ=255) ctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgaagacccaCACCGGGCCGGTGATCTGGGGCGGCGTGGGCt < 8:214193‑M2/32‑1 (MQ=255) | GTGGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCT > NC_002947/2033497‑2033675 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |