New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3832326 =85 (1.440)5 (0.090) 5/246 NT 6.2% intergenic (‑203/‑148) PP_3384/PP_3385 gluconate 2‑dehydrogenase gamma subunit/hypothetical protein
?NC_002947 3832356 = 71 (1.280)intergenic (‑233/‑118) PP_3384/PP_3385 gluconate 2‑dehydrogenase gamma subunit/hypothetical protein

ACAGCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACTGGCAAAC  >  NC_002947/3832209‑3832504
                                                                                                                                                   |                                                                                                                                                    
cttgatcctcgtctcttggcaggtcaaacactcgcagtgcacctacttccatgcggccgggagcaagcatttgcgaaagtttgaagcctaacgaggaatcaatttttgagacagattGAAACTTCTTACAACGCATTAGGAAGTTTCa                                                                                                                                                      >  4:208162‑M1/118‑148 (MQ=255)
aCAGCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCaa                                                                                                                                                     <  1:135988/149‑1 (MQ=255)
 cAGCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCaa                                                                                                                                                     <  3:799/148‑1 (MQ=255)
   gCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCt                                                                                                                                                  >  7:30525/1‑149 (MQ=255)
   gCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCt                                                                                                                                                  >  4:260577/1‑149 (MQ=255)
    ccGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTg                                                                                                                                                 >  2:43321/1‑149 (MQ=255)
     cGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGt                                                                                                                                                <  2:354307/149‑1 (MQ=255)
      gAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACTACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGtc                                                                                                                                               >  2:353216/1‑149 (MQ=255)
           tctcttggcaggtcaaacactcgcagtgcacctacttccatgcggccgggcgcaagcatttgcgaaagtttgaagcctaacgaggaatcaatttttgagacagattGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGtc                                                                                                                                               <  8:237462‑M1/38‑1 (MQ=255)
           tctcttggcaggtcaaacactcgcagtgcacctacttccatgcggccgggcgcaagcatttgcgaaagtttgaagcctaacgaggaatcaatttttgagacagattGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGtc                                                                                                                                               >  7:237462‑M1/107‑144 (MQ=255)
              tAGCGCGATCAGAAAGCTTTTGAAACCGGTTTCATGCTTTCCCTTCCCTACCTGTACAAAACATCATTTATTTGAAAAGAAACACTTAAAAACAACTATTAGCTAAACTACTAACAACGCAATAGGAAGTTTCAATCTGTCTCaataat                                                                                                                                       >  6:2513/1‑149 (MQ=255)
                gcgcGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAAtt                                                                                                                                      >  4:208432/1‑148 (MQ=255)
                gcgcGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAAt                                                                                                                                       <  8:40823/147‑1 (MQ=255)
                  gcgTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGAt                                                                                                                                   <  4:178193/149‑1 (MQ=255)
                    gTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTc                                                                                                                                 <  7:105233/149‑1 (MQ=255)
                        aGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCaa                                                                                                                                                     >  1:30103/1‑125 (MQ=255)
                        aGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCaa                                                                                                                                                     <  2:30103/125‑1 (MQ=255)
                         gAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAAtt                                                                                                                                      <  8:21288/139‑1 (MQ=255)
                         gAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAAtt                                                                                                                                      >  7:21288/1‑139 (MQ=255)
                          aaaGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGt                                                                                                                            >  1:362070/1‑148 (MQ=255)
                              gTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGc                                                                                                                       <  4:136530/149‑1 (MQ=255)
                               ttttGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCt                                                                                                                      >  1:5009/1‑149 (MQ=255)
                               ttttGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGAATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCt                                                                                                                      >  1:25250/1‑149 (MQ=255)
                                   taaaCCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCt                                                                                                                                                  <  7:260240/116‑1 (MQ=255)
                                   gAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAAAAACTTTTATCGAAAATTCTTACAACGCATTAGGAAGTTTCAATCt                                                                                                                                                  >  8:260240/1‑117 (MQ=255)
                                       ccGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACtt                                                                                                              >  8:317734/1‑149 (MQ=255)
                                       cacctacttccatgcggccgggcgcaagcatttgcgaaagtttgaagcctaacgaggaatcaatttttgagacagattgaaacttcttacaacgcattaggaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAAc                                                                                                                <  3:118100‑M2/39‑1 (MQ=255)
                                         ggTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTc                                                                                                            <  5:2513/149‑1 (MQ=255)
                                           tttCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGc                                                                                                          <  8:30525/149‑1 (MQ=255)
                                             tCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCa                                                                                                         >  8:62538/1‑148 (MQ=255)
                                               aTGCTTTGCCTTCCCAACCTGTACAAAACATCATTTTTTTGACAAGAAACACTAAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAAt                                                                                                      <  8:103874/149‑1 (MQ=255)
                                                     tGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCtt                                                                                                  <  4:210438/147‑1 (MQ=255)
                                                           cccTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGccc                                                                                            <  2:84635/147‑1 (MQ=255)
                                                                 cTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCAt                                                                                    >  4:66196/1‑149 (MQ=255)
                                                                    tACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATgg                                                                                  >  3:75264/1‑148 (MQ=255)
                                                                    tACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATg                                                                                   <  7:62538/147‑1 (MQ=255)
                                                                     aCAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGaa                                                                                >  3:340426/1‑149 (MQ=255)
                                                                      cAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGaa                                                                                <  1:353216/148‑1 (MQ=255)
                                                                      cAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGaa                                                                                <  2:5009/148‑1 (MQ=255)
                                                                      cAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAg                                                                               >  1:228179/1‑149 (MQ=255)
                                                                       aaaaCCTCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGt                                                                              <  8:24093/149‑1 (MQ=255)
                                                                       aaaaCATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAg                                                                               >  6:339927/1‑148 (MQ=255)
                                                                        aaaCATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTa                                                                             <  3:121163/149‑1 (MQ=255)
                                                                         aaCATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTTGCAAATGCTTGCGCCCGGCCGCATGGAAGTAg                                                                            <  1:43321/149‑1 (MQ=255)
                                                                         aaCATCATTTTTATGACAAGAAACACTTAAAAACAACTTTTAGCGCAACTTCTTACAACTCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGCCTTCAAACTTTCTCAAATGCTTGCGCCCGGCAGCATGGAAGTAg                                                                            >  6:23563/1‑149 (MQ=255)
                                                                            atcatTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTg                                                                         <  4:75264/149‑1 (MQ=255)
                                                                            atcatTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTg                                                                         >  3:135702/1‑149 (MQ=255)
                                                                              gtttgaagcctaacgaggaatcaatttttgagacagattGAAACTTCCTAATGCGTTGTAAGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTg                                                                         <  3:118100‑M1/108‑1 (MQ=255)
                                                                              catTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCtt                                                                                                  >  5:210750/1‑122 (MQ=255)
                                                                              catTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCtt                                                                                                  <  6:210750/122‑1 (MQ=255)
                                                                              catTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGaa                                                                                <  2:190483/140‑1 (MQ=255)
                                                                              catTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGaa                                                                                >  1:190483/1‑140 (MQ=255)
                                                                              catTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCa                                                                       >  8:203787/1‑149 (MQ=255)
                                                                                tttttttGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACt                                                                     >  2:173672/1‑149 (MQ=255)
                                                                                   ttttGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGc                                                                   >  5:306778/1‑148 (MQ=255)
                                                                                     ttGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGa                                                                 <  2:277274/148‑1 (MQ=255)
                                                                                      tGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAg                                                                <  7:203787/148‑1 (MQ=255)
                                                                                       gACAAGTAACACTTAAAAACAACTTTTAGCGAAACTTCTTTCATCGCATTAGGAAGTTTCTATCTGTCTGAAAAATTGATTCCGCGTTAGGCTTCAAACTTTCGCAAATGGTTGGGCGCGGGCGCATGGAAGTAGGTGCACTGCGAgt                                                               <  5:23563/148‑1 (MQ=255)
                                                                                         cAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAg                                                                               <  4:90714/130‑1 (MQ=255)
                                                                                         cAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGtt                                                            >  4:82128/1‑149 (MQ=255)
                                                                                          aaGAAACCCTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGttt                                                           <  6:311009/149‑1 (MQ=255)
                                                                                          aaGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGttt                                                           >  4:167166/1‑149 (MQ=255)
                                                                                          aaGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGttt                                                           <  5:339927/149‑1 (MQ=255)
                                                                                          aaGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGttt                                                           <  3:66196/149‑1 (MQ=255)
                                                                                              aaCACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGAcc                                                       <  1:143558/149‑1 (MQ=255)
                                                                                              aaCACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGAc                                                        <  2:25250/148‑1 (MQ=255)
                                                                                               acacTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCt                                                      <  3:208432/149‑1 (MQ=255)
                                                                                                  cTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGcc                                                   <  4:340426/149‑1 (MQ=255)
                                                                                                   ttAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAgt                                                               <  8:345093/136‑1 (MQ=255)
                                                                                                   ttAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAgt                                                               >  7:345093/1‑136 (MQ=255)
                                                                                                     aaaaaCAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAGGTAGGTGCACTGCGAGTGTTTGACCTGcc                                                   >  8:122949/1‑146 (MQ=255)
                                                                                                           aacTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGAc                                            >  5:31013/1‑147 (MQ=255)
                                                                                                           aacTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGAc                                            >  4:254058/1‑147 (MQ=255)
                                                                                                             gacagattgaaacttcctaatgcgttgtaagaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAgaga                                             <  8:237462‑M2/106‑1 (MQ=255)
                                                                                                             gacagattgaaacttcctaatgcgttgtaagaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAgaga                                             >  7:237462‑M2/39‑144 (MQ=255)
                                                                                                              ttttAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGa                                       >  5:155673/1‑149 (MQ=255)
                                                                                                                ttAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGa                                       <  6:306778/147‑1 (MQ=255)
                                                                                                                ttAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGa                                       <  2:362070/147‑1 (MQ=255)
                                                                                                                   gCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAg                                  <  3:260577/149‑1 (MQ=255)
                                                                                                                    tgaaacttcctaatgcgttgtaagaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCTCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAg                                  >  4:208162‑M2/32‑148 (MQ=255)
                                                                                                                      AAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGAc                                            >  1:94061‑M1/1‑136 (MQ=255)
                                                                                                                      AAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGAc                                            <  2:94061‑M1/136‑1 (MQ=255)
                                                                                                                             ttACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCaaa                        >  3:81178/1‑149 (MQ=255)
                                                                                                                               aCAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCaaa                        >  6:367882/1‑147 (MQ=255)
                                                                                                                               aCAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCaaa                        >  1:18858/1‑147 (MQ=255)
                                                                                                                                 aaCGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGt                    >  7:143983/1‑149 (MQ=255)
                                                                                                                                  aCGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTc                   <  3:82128/149‑1 (MQ=255)
                                                                                                                                   cgttgtaagaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTc                   <  4:118100‑M2/132‑1 (MQ=255)
                                                                                                                                   cGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAg                                                                            >  3:270388/1‑91 (MQ=255)
                                                                                                                                   cGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAg                                                                            <  4:270388/91‑1 (MQ=255)
                                                                                                                                           gaagtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCAc          <  2:18858‑M2/141‑1 (MQ=255)
                                                                                                                                             agtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAGGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACt         <  7:122949‑M2/142‑1 (MQ=255)
                                                                                                                                             agtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACTg        <  8:143983‑M2/143‑1 (MQ=255)
                                                                                                                                             agtttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACTg        <  7:317734‑M2/143‑1 (MQ=255)
                                                                                                                                               tttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGcc                            <  2:368917‑M2/123‑1 (MQ=255)
                                                                                                                                               tttcAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGcc                            >  1:368917‑M2/5‑127 (MQ=255)
                                                                                                                                                   aaTCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACTGGCAAAc  >  6:90525/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
ACAGCCGAATAATCTAGCGCGTTCAGAAAGGTTTTGAAACCGGTTTCATGCTTTGCCTTCCCTACCTGTACAAAACATCATTTTTTTGACAAGAAACACTTAAAAACAACTTTTAGCGAAACTTCTTACAACGCATTAGGAAGTTTCAATCTGTCTCAAAAATTGATTCCTCGTTAGGCTTCAAACTTTCGCAAATGCTTGCGCCCGGCCGCATGGAAGTAGGTGCACTGCGAGTGTTTGACCTGCCAAGAGACGAGGATCAAGGATGCCCAAAGAGTCCGACCGCACTGGCAAAC  >  NC_002947/3832209‑3832504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.