| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3968879 | NA (NA) | 8 (0.140) | 6/248 | NT | 14.7% | coding (1007/1179 nt) | PP_3498 | transposase |
| ? | NC_002947 | 3968942 = | 49 (0.830) | coding (1070/1179 nt) | PP_3498 | transposase | |||||
AGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCT > NC_002947/3968795‑3969085 | attccgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatggtccagggcgcgcattccgtcttgagccagctaaggcctgattcc > 1:162544‑M2/149‑149 (MQ=255)attccgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcc > 2:226877‑M2/149‑149 (MQ=255) ttccgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcc > 2:158817‑M2/148‑148 (MQ=255) tccgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGa > 5:251994‑M2/147‑149 (MQ=255) cgccttcttcggtatcgtgcctgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGAt > 2:169776‑M2/145‑148 (MQ=255) cgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGAt > 8:63407‑M2/145‑148 (MQ=255) cgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGAt > 4:60310‑M2/145‑148 (MQ=255) cgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATc < 4:24569‑M2/5‑1 (MQ=255) cgccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATc < 7:249145‑M2/5‑1 (MQ=255) gccttcttcggtatcgtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCa < 5:329213‑M2/6‑1 (MQ=255) gtgcccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCA‑TCT‑‑GGCTGATCGgaa < 1:51050‑M2/21‑1 (MQ=255) ccgatcagcacagcagcggaaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCAGGCT‑‑GGCTAATCGAAATCt > 1:234634‑M2/125‑149 (MQ=255) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATgg > 3:331550/1‑149 (MQ=32) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATgg > 6:181363/1‑149 (MQ=32) atgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCATGATTCCGATCAGCCAGATGAACGCCGCCTATTGCGAT‑GGCTATCCCGCGTTGGGCGCAAGGAGGCGGCGAGCAGGAT‑‑GGGTAATCGAAATATGCGGATTATATGGGc > 3:92869/1‑149 (MQ=11) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTg < 2:13097/149‑1 (MQ=32) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTg > 7:42536/1‑149 (MQ=32) aaacaaaatcagattgggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTg < 2:234634‑M2/44‑1 (MQ=255) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCATGtt > 5:51998/1‑148 (MQ=17) ggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTa > 4:172484/1‑147 (MQ=32) ggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACa < 8:341820/149‑1 (MQ=32) gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTa > 5:142263/1‑146 (MQ=32) aatcatatttgtcaagatgagcaagcgctgtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGc < 7:157795‑M2/40‑1 (MQ=255) gcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACagag < 3:144125/149‑1 (MQ=32) gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGAGGATAATAGAAATGAGGCGATTAAAAGGGGCCAGTTACagag > 1:123707/1‑149 (MQ=11) gggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCA‑TCT‑‑GGCTGATCGGaatcagg > 8:343917‑M2/91‑113 (MQ=255) gggcaagatgagcaagcgcggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCA‑TCT‑‑GGCTGATCGGaatcagg < 7:343917‑M2/26‑4 (MQ=255) cttCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATTATCGCCGCCTCTTGCGCT‑GGCTATCCGGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAg < 6:331344/146‑1 (MQ=12) aGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTAcc > 3:335408/1‑148 (MQ=32) ccAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc < 6:51998/149‑1 (MQ=32) tAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCaaa > 7:106836/1‑149 (MQ=32) aaGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAc > 4:228065/1‑149 (MQ=32) gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcg > 5:345182/1‑148 (MQ=32) cggtgacggctacatacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAcc > 5:162969‑M2/73‑148 (MQ=255) cTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaac < 8:199276/149‑1 (MQ=32) tGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaac > 3:119591/1‑148 (MQ=32) gATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAAcc > 7:39495/1‑149 (MQ=32) gATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAAcc > 7:274497/1‑149 (MQ=32) aTCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg < 8:106836/149‑1 (MQ=32) aTCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg < 2:213635/149‑1 (MQ=32) tacgcagcctgatgatccagggcgcgcattccgtcttgagccagctaaggcctgattcCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg > 5:379681‑M2/59‑147 (MQ=255) aGCCAGATGATCGCCGCCTCTTGCGCTGGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg > 1:27724/1‑147 (MQ=17) aGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg < 3:191317/127‑1 (MQ=32) aGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg > 4:191317/1‑127 (MQ=32) aGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGa < 8:42536/148‑1 (MQ=32) ccAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggc > 1:87966/1‑149 (MQ=32) aGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa < 4:21784/132‑1 (MQ=32) aGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa > 3:21784/1‑132 (MQ=32) gatgatCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcggc > 5:238986/1‑149 (MQ=32) tCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGa < 7:63407/149‑1 (MQ=32) gccgccTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGa < 4:119591/147‑1 (MQ=32) gccgccTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGc > 2:47506/1‑149 (MQ=32) gccTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctc < 4:92869/149‑1 (MQ=32) ccTCTTGCGCT‑GGCTATCCCGCCTTGGTCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctct < 2:27724/149‑1 (MQ=17) ccTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctct < 8:274497/149‑1 (MQ=32) ttGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa < 4:331550/147‑1 (MQ=32) ttGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa < 6:142263/147‑1 (MQ=32) gcgcT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc < 8:39495/146‑1 (MQ=32) gcgcT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCaa > 2:7435/1‑149 (MQ=32) gCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCggg > 5:149102/1‑148 (MQ=32) gCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCgg < 6:238986/147‑1 (MQ=32) tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc < 3:119653/138‑1 (MQ=32) tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc > 4:119653/1‑138 (MQ=32) tCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGa > 4:159713/1‑116 (MQ=32) gggCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCggg < 5:181363/148‑1 (MQ=32) gggCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCCGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCggg < 2:87966/148‑1 (MQ=17) cgcAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGgcgc > 1:88494/1‑149 (MQ=32) ggcggcGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCt < 4:335408/149‑1 (MQ=32) | AGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCT‑GGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCT‑‑GGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCT > NC_002947/3968795‑3969085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |