New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4601395	44 (0.750)	4 (0.070)	4/248	NT	8.6%	coding (497/633 nt)	PP_4073	hypothetical protein
	?	NC_002947	= 4601418	43 (0.770)					coding (474/633 nt)	PP_4073	hypothetical protein

GCGAGCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTGATG  >  NC_002947/4601277‑4601565                                                                                                                                              |                                                                                                                                                    gCGAGCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGtcgag                                                                                                                                                >  6:121409‑M2/1‑142 (MQ=255) gCGAGCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGtcgag                                                                                                                                                >  7:120259‑M2/1‑142 (MQ=255) gCGAGCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCGCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGtcga                                                                                                                                                 >  7:304275‑M2/1‑142 (MQ=255)           tcgATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGtt                                                                                                                                    <  1:28338/149‑1 (MQ=255)             gATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGtttt                                                                                                                                  >  4:64388/1‑149 (MQ=255)              aTAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTTCGTGAATGGGATGGGCCCCGAGCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGtttta                                                                                                                                 >  2:270464/1‑148 (MQ=255)               tAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTcc                                                                                                                                <  5:326933/149‑1 (MQ=255)               tAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTATCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTc                                                                                                                                 >  7:167442/1‑148 (MQ=255)                  gCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACtt                                                                                                                                           >  1:69066/1‑135 (MQ=255)                  gCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACtt                                                                                                                                           <  2:69066/135‑1 (MQ=255)                  gCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGAGAATGCGATGGGCCCCGATCTATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATc                                                                                                                             >  6:275032/1‑149 (MQ=255)                      gTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACATGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACtt                                                                                                                         <  6:304933/149‑1 (MQ=255)                                   gCGTCAAAAACGAGTCCATCATCGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCTCTTGCCACGGTGTgg                                                                                                             <  1:258122/148‑1 (MQ=255)                                      tCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTa                                                                                                          >  3:62598/1‑148 (MQ=255)                                      tCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGACTCTGCCGCCGTAGAGCACTTTGCCGTTTTCCATCACTTTCCACGTTGTGGGTa                                                                                                          >  3:102080/1‑148 (MQ=255)                                        aaaaaCGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAg                                                                                                       >  5:6524/1‑149 (MQ=255)                                        aaaaaCGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAg                                                                                                       >  1:317339/1‑149 (MQ=255)                                                          ggCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCctc                                                                                     >  7:348486/1‑149 (MQ=255)                                                               ggTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAAc                                                                                <  4:62598/149‑1 (MQ=255)                                                                       ctctctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTg                                                                        <  3:64388/149‑1 (MQ=255)                                                                          tctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACtt                                                                                                                         <  7:97562/97‑1 (MQ=255)                                                                          tctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACtt                                                                                                                         >  8:97562/1‑97 (MQ=255)                                                                          tctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCAc                                                                     >  7:307049/1‑149 (MQ=255)                                                                            tACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCa                                                                      <  1:7148/146‑1 (MQ=255)                                                                                     gCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCAt                                                          >  6:154997/1‑149 (MQ=255)                                                                                      cGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATc                                                         >  1:74712/1‑149 (MQ=255)                                                                                       gATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCCTc                                                         >  3:289138/1‑148 (MQ=255)                                                                                           ggCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACgg                                                    <  5:154997/149‑1 (MQ=255)                                                                                            gCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACggg                                                   <  2:71253/149‑1 (MQ=255)                                                                                             ccccGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCAcc                                                                          >  3:260793/1‑125 (MQ=255)                                                                                             ccccGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCAcc                                                                          <  4:260793/125‑1 (MQ=255)                                                                                               acGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTg                                                <  8:348486/148‑1 (MQ=255)                                                                                                cGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTgg                                               <  8:167442/149‑1 (MQ=255)                                                                                                    cAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCgg                                           >  8:277372/1‑149 (MQ=255)                                                                                                     aaTTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGt                                          <  6:6524/149‑1 (MQ=255)                                                                                                       ttGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCGCTCAACCGCACCTGCACTAGGCTGGCATCGACGGGTTGGGCGGTGa                                        >  4:345247/1‑149 (MQ=255)                                                                                                       ttGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGGGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTggg                                              <  5:275032/143‑1 (MQ=255)                                                                                                          cTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGtcgagcagatcaagcaattgatcggggcccatcgcattcacgtagagagcgacaaccctgccgttgatggactcgtttttgacgctcaggggctggacccgcttatcgac                                       <  2:330068‑M2/147‑111 (MQ=255)                                                                                                          cTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGAc                                       >  3:9247/1‑147 (MQ=255)                                                                                                             gATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTATCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGtt                                  >  1:114253/1‑149 (MQ=255)                                                                                                              aTCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGtt                                  <  4:9247/148‑1 (MQ=255)                                                                                                              aTCTGAGCGATCACCGGCAGTCCTATGCCGTCGTCGAGCACTTGGCCGTTTTCCATTACTTTCCACGGTGTGGGTACAGTAGCGCCCCGCTCACCTCTCAAAAGCACCTTCACTCGGCTTGCATCGACGGTTTGGGGGGTGACCAGtt                                  <  8:154022/148‑1 (MQ=255)                                                                                                                 tGCTCGATACCCGGCAGGCCTCTGCCGGCGtcgagcagatcaagcaattgatcggggcccatcgcattcacgtagagcgcgacaaccctgccgttgatggactcggttttgacgctcaggggctggacccgcttatcgacgaggctcg                               <  7:153351‑M2/148‑119 (MQ=255)                                                                                                                 tGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCaa                              >  8:81856/1‑149 (MQ=255)                                                                                                                  gCTCGATACCCGGCAGGCCTCTGCCGGCGtcgagcagatcaagcaattgatcggggcccatcgcattcacgtagagagcgacaaccctgccgttgatggactcgtttttgacgctcagg                                                           >  8:67328‑M2/1‑29 (MQ=255)                                                                                                                  gCTCGATACCCGGCAGGCCTCTGCCGGCGtcgagcagatcaagcaattgatcggggcccatcgcattcacgtagagagcgacaaccctgccgttgatggactcgtttttgacgctcagg                                                           <  7:67328‑M2/119‑91 (MQ=255)                                                                                                                   cTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCAGCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAAcc                            <  3:345247/149‑1 (MQ=255)                                                                                                                   cTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCaa                              <  5:161592/147‑1 (MQ=255)                                                                                                                      gATTCCCTGCATTCCTCTTCCGTCGTCGAGCACTTGGGCGTTTTCGATCAATTGCAAGGTTGTTTGTACAGTAGCGCCCCGCTACGGTCTAATGCTCACCTGCACTCGGCTGGCATCGATGGGTTGGTTGGTTAACTGTTGcttcgtc                          <  4:102080/148‑7 (MQ=255)                                                                                                                          cccGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCTTCGACGGGTTGGGCGGTGACCAGTTGCAACCTCgaga                      <  4:289138/148‑1 (MQ=255)                                                                                                                                    ctctGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACg           >  2:274275/1‑149 (MQ=255)                                                                                                                                     tctGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACg           >  8:11618/1‑148 (MQ=255)                                                                                                                                          cGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCt      >  6:228787/1‑148 (MQ=255)                                                                                                                                          cGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCACCACTCTCAACCGCACCTGCACTCGGCGGGCAGCGACGGGTTGGGCGGTGACCAGATGCACCCTAGAGATGtt                  >  5:295079/1‑136 (MQ=255)                                                                                                                                             cGtcgagcagatcaagcaattgatcggggcccatcgcattcacgtagagagcgacaaccctgccgttgatggactcgtttttgacgctcaggggctggacccgcttatcgacgaggctcgcaagacatgtcgctggtagctgatgtcga  >  8:153351‑M2/1‑2 (MQ=255)                                                                                                                                              gTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATg                    >  4:309376/1‑130 (MQ=255)                                                                                                                                              gTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATg                    <  3:309376/130‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                    GCGAGCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTGATG  >  NC_002947/4601277‑4601565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.