| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,575,045 | C→T | 6.7% | L573L (CTG→TTG) | glgX → | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,575,045 | 0 | C | T | 6.7% | 219.6 / 3.8 | 74 | L573L (CTG→TTG) | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base C (31/38); new base T (3/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01 | |||||||||||
GCCACCTTGCTGCTGGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGCGTTGA > NC_002947/4574898‑4575190 | gCCACCTTGCTGCTGGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAgctgct < 2:354465/149‑1 (MQ=255) cACCTTGCTGCTGGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTgg > 3:60307/1‑149 (MQ=255) cTTGCTGCTGGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGCGTGACCTGGGACGTTTAC‑‑‑GAGTCAGGCGAAGAGCTGCTGGCCt > 2:252741/1‑149 (MQ=255) ctgctgGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCg < 7:208108/148‑1 (MQ=255) ctgctgGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGt < 4:60307/149‑1 (MQ=255) gctgGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTc > 2:212937/1‑148 (MQ=255) ctgGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTc < 3:163585/147‑1 (MQ=255) ggCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAgc < 2:179586/149‑1 (MQ=255) cccAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAgcgc < 3:184762/149‑1 (MQ=255) cccAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAgcgc > 2:124429/1‑149 (MQ=255) ggCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAGCAGCTCTTGGCCTTcc < 1:59601/136‑2 (MQ=255) ggCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAGCAGCTCTTGGCCTTcc > 2:59601/1‑135 (MQ=255) cGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgc < 1:270411/149‑1 (MQ=255) cGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgc < 8:272912/149‑1 (MQ=255) gCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcc > 2:152611/1‑149 (MQ=255) cAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctg > 5:264454/1‑149 (MQ=255) cAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctg > 3:366543/1‑149 (MQ=255) aTCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctgcgcct < 6:264454/149‑1 (MQ=255) cGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctgc > 4:364771/1‑137 (MQ=255) cGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctgc < 3:364771/137‑1 (MQ=255) cGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTAcc < 1:42905/149‑1 (MQ=255) gTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctgcgcct < 3:181995/132‑1 (MQ=255) gTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACgcgcctgcgcct > 4:181995/1‑132 (MQ=255) gTTCAGACGCACCCAGCACCTCAACAACAACTCTTACTTCCAGGACAGCCACATCGGATGGGTGAACTGCGACCTCGAC‑‑‑GACCAAGGACAAGAGCTGCTGGCCTTCGTCACGCCCAGGCCGcgcctgcgcctg > 8:59869/1‑133 (MQ=255) ttCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGc < 1:99302/134‑1 (MQ=255) ttCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGc > 2:99302/1‑134 (MQ=255) ttCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTgcg < 3:47503/149‑1 (MQ=255) ttCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTgcg < 3:52330/149‑1 (MQ=255) gCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGcgccgc < 1:78480/149‑1 (MQ=255) gCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGcgccg > 1:205220/1‑148 (MQ=255) cccAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCgcgc < 2:242437/149‑1 (MQ=255) aGCACGGCTACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGGGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCt‑tt < 2:85467/149‑1 (MQ=255) aGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCt‑tt > 7:198198/1‑149 (MQ=255) aGCACGGAAACAACAACGTTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGAAGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCt‑tt < 3:16734/149‑1 (MQ=255) gCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTc > 4:157044/1‑149 (MQ=255) ggCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCtggt < 2:110629/149‑1 (MQ=255) caacaacaaCGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACGGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCtggtgg < 8:286513/149‑1 (MQ=255) acaacaacGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGCCCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTggtgggt > 6:89973/1‑149 (MQ=255) acaacaacGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GTGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTggtgggt < 4:255499/149‑1 (MQ=255) cTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAAt > 1:61714/1‑149 (MQ=255) aCTGCCAGGACAGCGAGGTCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATg < 3:51734/147‑1 (MQ=255) aCTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGa < 1:212937/148‑1 (MQ=255) aCTGCCAGGACAGCGAGATCGGATGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAg > 7:233989/1‑149 (MQ=255) cTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAg < 2:61714/148‑1 (MQ=255) cTGCCAGCACAGAGAGAGAGGCTGTGTGAAATGGGACCTGGTCCCTGATTAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAAt < 1:124429/148‑1 (MQ=255) tGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAgg > 2:27901/1‑148 (MQ=255) ccAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCaa > 2:291314/1‑149 (MQ=255) ggACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCTCTTCTGGTGGGTGACTACAATGAGGCAAtt < 1:27901/149‑1 (MQ=255) ggACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTg > 7:38289/1‑149 (MQ=255) gACAGCGAGATTGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTgg < 1:310370/149‑1 (MQ=255) gACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCtg < 3:343781/123‑1 (MQ=255) gACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCtg > 4:343781/1‑123 (MQ=255) aCAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTggg < 1:291314/149‑1 (MQ=255) aCAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTggg < 8:233989/149‑1 (MQ=255) cAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTgggg < 3:157044/149‑1 (MQ=255) aGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGt > 5:134513/1‑149 (MQ=255) aGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGt > 8:230946/1‑149 (MQ=255) cTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGa > 8:12538/1‑149 (MQ=255) tGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTa < 4:32720/119‑1 (MQ=255) tGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTa > 3:32720/1‑119 (MQ=255) cTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACctggctgg < 2:205220/149‑1 (MQ=255) tGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGAGCtggctggc > 8:258415/1‑149 (MQ=255) tGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACctggc > 2:149352/1‑138 (MQ=255) gAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATgg < 5:89973/149‑1 (MQ=255) c‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCa < 4:180697/149‑1 (MQ=255) ttgacgAAGGCCAGCAGCTCTTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATgg > 4:264498/6‑148 (MQ=255) gacgAAGGCCAGCAGCTCTTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGc < 3:264498/144‑1 (MQ=255) aGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCATGGCCTACCCGGTGCTGCTCCGCTCGCGCT‑TTCTGGTTGGTGACTACAATGAGGCAATTTTGGTCAAGGACGTGACCTGGCTTGCACCCGATGGCAGc < 1:252741/149‑1 (MQ=255) cgAAGGCCAGCAGCTCTTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGc > 6:56030/2‑148 (MQ=255) aGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGc > 2:197440/1‑145 (MQ=255) cAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTggtgggt < 2:120161/84‑1 (MQ=255) cAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAg > 4:110732/1‑96 (MQ=255) cAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAg > 4:90896/1‑149 (MQ=255) aaGAGCTGCTTGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTTCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGc < 8:198198/149‑1 (MQ=255) aaGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGc > 8:61921/1‑149 (MQ=255) ctgctgGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGCGTTGa < 7:61921/149‑1 (MQ=255) ctgctgGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGCGTTGa < 6:134513/149‑1 (MQ=255) | GCCACCTTGCTGCTGGCCCAGGGCACGCCAATGATCGTTGCCGGCGACGAGTTCAGCCGCACCCAGCACGGCAACAACAACGCTTACTGCCAGGACAGCGAGATCGGCTGGGTGAACTGGGACCTGGAC‑‑‑GAGGAAGGCCAAGAGCTGCTGGCCTTCGTCAAGCGCCTGACGCGCCTGCGCCTGGCCTACCCGGTGCTGCGCCGCTCGCGCT‑TTCTGGTGGGTGACTACAATGAGGCAATTGGGGTCAAGGACGTGACCTGGCTGGCACCCGATGGCAGCGAGATGAGCGTTGA > NC_002947/4574898‑4575190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |