| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,672,934 | T→G | 5.3% | Q25H (CAA→CAC) | PP_4136 ← | LuxR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,672,934 | 0 | T | G | 5.3% | 245.9 / 4.0 | 76 | Q25H (CAA→CAC) | PP_4136 | LuxR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (40/32); new base G (2/2); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.90e-01 | |||||||||||
CTTGATCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGCACAGGC > NC_002947/4672793‑4673076 | cTTGATCACAGCAGCCACCCGGGTAGTCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGt > 1:198921/1‑148 (MQ=255) ttGATCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTc > 5:87747/1‑149 (MQ=255) aTCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCAAGTGCTGttgtg < 6:158509/148‑4 (MQ=255) aTCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCAAGTGCTGttgtg < 7:322765/148‑4 (MQ=255) aTCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGAACTTGCTGTTCACg > 8:20345/1‑149 (MQ=255) tCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATTACAGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGt < 1:123572/149‑1 (MQ=255) acaGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTg < 5:82236/148‑1 (MQ=255) agcagcCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCg > 1:100139/1‑149 (MQ=255) gcaggCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGACCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGt < 5:122342/149‑1 (MQ=255) gcCACCCGGGTAGGCACTTCAAATTTGAGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAg > 6:306920/1‑149 (MQ=255) aCCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGc > 5:176490/1‑148 (MQ=255) ccGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGaa < 3:151860/149‑1 (MQ=255) tAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCggg < 7:14140/149‑1 (MQ=255) tAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCggg < 5:306920/149‑1 (MQ=255) tAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCggg < 2:8604/149‑1 (MQ=255) gCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCg > 1:222096/1‑149 (MQ=255) gCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCg > 3:239143/1‑149 (MQ=255) ttaaaaTTTGCGCAGGATGTTGGATACGTGAAAATTCAACGTCGACTCCTTCCAATCAAGGATCTGGCCGATCTACCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACTTGGCGTCAGGCTAAACGGGGCGTCCg > 2:86570/4‑149 (MQ=255) ttCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCg > 8:214801/1‑149 (MQ=255) ttCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGACGATCTCGCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGACCg > 2:81592/1‑149 (MQ=255) cAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGc > 1:179978/1‑148 (MQ=255) tttGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCt < 4:92024/110‑1 (MQ=255) tttGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCt > 3:92024/1‑110 (MQ=255) cgcAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGtt < 2:100139/148‑1 (MQ=255) gcAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTtgc > 7:289089/1‑149 (MQ=255) ggATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTtgctgc < 6:176490/149‑1 (MQ=255) aTGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGa < 2:222096/149‑1 (MQ=255) aTGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGa < 7:103863/149‑1 (MQ=255) tGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAg > 2:180464/1‑149 (MQ=255) ttGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCCCGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAgtg > 4:141608/1‑149 (MQ=255) ttGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAgtg < 1:328345/149‑1 (MQ=255) aTACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGa < 4:239143/149‑1 (MQ=255) tACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAg < 7:214801/149‑1 (MQ=255) gTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCCTCCGCCAGGGGTTGCTGCGAGTGTCGGGCGt > 8:351426/1‑149 (MQ=255) aaTTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTgtca < 3:124740/149‑1 (MQ=255) cGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTgt > 8:23549/1‑137 (MQ=255) cGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTgt < 7:23549/137‑1 (MQ=255) aCTCCTTGCATTCAAGGATCTGGCCGTTCTGACACGATCTCTTGCCATAAGCACACGAAAACAGGAGTTGCTGTTCACGTGGCGTCAGGCGATCCGGGGCGACCGGCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGaa < 1:86570/149‑1 (MQ=255) cTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACGACAACAGGAGTTGCTGTTCACGTGGCGTCAGGCGAAGCGGGGCGACCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGaa < 1:81592/148‑1 (MQ=255) tCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑t > 4:201977/1‑149 (MQ=255) cTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑c < 1:180464/148‑1 (MQ=255) tGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCAc > 5:205397/1‑149 (MQ=255) aTTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACggg > 1:216751/1‑149 (MQ=255) ttCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCTCTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGt < 4:158897/149‑1 (MQ=255) ttCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGt < 2:86864/149‑1 (MQ=255) ttCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGt > 7:63302/1‑149 (MQ=255) tCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGt > 4:262240/1‑148 (MQ=255) aaGGATCTGGCCGATCTCCGACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGGGTACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGAt < 7:351426/149‑1 (MQ=255) aaGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCCGGCGAACCGGGGCGTCCGCGAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGAt > 6:216650/1‑149 (MQ=255) aaGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGAt > 7:313242/1‑149 (MQ=255) ccGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGc < 8:313242/149‑1 (MQ=255) gATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCAt > 7:154153/1‑149 (MQ=255) ccACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATtgctgc > 6:300719/1‑149 (MQ=255) ccACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATtgctgc > 6:317814/1‑149 (MQ=255) ccACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGGCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATtgct < 6:87747/147‑1 (MQ=255) cACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGcc > 1:211864/1‑149 (MQ=255) aCGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGcc > 6:38265/1‑148 (MQ=255) cGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTa > 1:116289/1‑149 (MQ=255) gCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCt > 6:94353/1‑149 (MQ=255) ctctTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTg < 3:262240/149‑1 (MQ=255) ccATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCa > 5:286490/1‑149 (MQ=255) cATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCAc > 1:42636/1‑149 (MQ=255) tAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCt < 6:286490/149‑1 (MQ=255) tAAGCACACCACAACAGCACTTGCTGTTCACGTGCCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGGTGTCAGTCAGGTTTGAAC‑‑T‑CCACGGGAGATTGAGCGCGGCATTGCTGCCTTCCTGCAGTCCCCt > 8:278216/1‑149 (MQ=255) caccacAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGaa < 8:63302/149‑1 (MQ=255) caccacAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGaa < 5:300719/149‑1 (MQ=255) accacAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAg > 4:79802/1‑149 (MQ=255) accacAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAg > 2:86126/1‑149 (MQ=255) accacAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAg > 6:99748/1‑149 (MQ=255) gtgaacaGCAAGTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAACAGTGAGGCGGGTGATTGAGCGGGGAATTGCAGCCTACCTGCAGTCACCTTACGaa > 1:303884/4‑149 (MQ=255) cacaACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATtgctgc > 4:145898/1‑124 (MQ=255) cacaACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATtgctgc < 3:145898/124‑1 (MQ=255) tgaacaGCAAGTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGca > 2:204764/3‑148 (MQ=255) aacaGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGCACAg < 3:209527/149‑1 (MQ=255) aacaGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGCACAg < 2:179978/149‑1 (MQ=255) caGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGCACAGGc > 5:147548/1‑149 (MQ=255) | CTTGATCACAGCAGCCACCCGGGTAGGCACTTCAAATTTGCGCAGGATGTTGGATACGTGAAAATTCACCGTCGACTCCTTGCATTCAAGGATCTGGCCGATCTCCCACGAGCTCTTGCCATAAGCACACCACAACAGCACTTGCTGTTCACGTGGCGTCAGGCGAACCGGGGCGTCCGCCAGGGGTTGCTGCGAGTGTCGAGCGTTGTCAGTCATGTTTGAAC‑‑T‑CCACGGGTGATTGAGCGGGGCATTGCTGCCTACCTGCAGTCACCTTACGAAGCACAGGC > NC_002947/4672793‑4673076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |