Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,904,892 | T→A | 6.7% | intergenic (‑59/+176) | PP_4312 ← / ← PP_4313 | hypothetical protein/peptidylprolyl isomerase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,904,892 | 0 | T | A | 6.7% | 227.7 / 4.7 | 75 | intergenic (‑59/+176) | PP_4312/PP_4313 | hypothetical protein/peptidylprolyl isomerase |
Reads supporting (aligned to +/- strand): ref base T (35/35); new base A (2/3); total (37/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 |
CCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTGCGCAATTGTGTAA > NC_002947/4904746‑4905035 | ccTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGc < 2:120301/149‑1 (MQ=255) ccTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGc > 5:186951/1‑149 (MQ=255) cAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAgg < 3:276023/148‑1 (MQ=255) ctgcCATCGCCGCGCCGTTGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGgcg > 5:184887/3‑149 (MQ=255) gcCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCTGCAACTAGCCGGgcgat > 4:207077/1‑147 (MQ=255) gcCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCTGCAACTAGCCGGgc < 2:318733/146‑1 (MQ=255) gcCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCTGCAACTAGCCGGgc > 1:318733/1‑146 (MQ=255) gcCAACGGCGCGGCGATGGCAGTGAGCACCAGGCCCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGcc > 2:68873/1‑149 (MQ=255) ccAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAAAGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGTGTTACCCGCCACATCGCCCTGCAACTAGCCGGgcgat < 1:61352/149‑3 (MQ=255) cAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCTGCAACTAGCCGGgcgatgt < 3:207077/149‑5 (MQ=255) cAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCg > 4:113171/1‑149 (MQ=255) aCGGCGCGGCGATGGCAGTGAGCACCAGGCCCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTg < 1:68873/149‑1 (MQ=255) ggcgcggcgATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCa < 3:48609/149‑1 (MQ=255) cgATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATg < 4:179055/149‑1 (MQ=255) tGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTg < 6:184887/149‑1 (MQ=255) aGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTgg < 6:203862/148‑1 (MQ=255) gCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGc > 5:294184/1‑148 (MQ=255) tCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGtt < 4:21365/105‑1 (MQ=255) tCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGtt > 3:21365/1‑105 (MQ=255) cagcagCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑Agg < 2:124345/149‑1 (MQ=255) caAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCaga < 6:186951/149‑1 (MQ=255) cgacgacgGCGAAAGAATGTTTGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGcccc > 4:6808/1‑149 (MQ=255) gacgacgGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGcccc > 3:94324/1‑148 (MQ=255) gacgacgGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGcccc > 2:354553/1‑148 (MQ=255) gacgGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAAc < 3:218979/149‑1 (MQ=255) gacgGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAAc < 7:269635/149‑1 (MQ=255) ggCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCAGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTGAGAGTGCCCC‑‑‑GAACACg > 8:329365/1‑149 (MQ=255) cGAAAGAATGTTTGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGtt < 3:6808/149‑1 (MQ=255) cGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGtt < 6:200314/149‑1 (MQ=255) gAAAGAATGTTGGCAACTTCATCAAGGCAGGGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGAAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGTTCAGAGTGCCCC‑‑‑GAACCCGtt > 1:215388/1‑149 (MQ=255) gAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGttt > 2:299767/1‑149 (MQ=255) aaGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTgg < 1:354553/149‑1 (MQ=255) aGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGt < 6:294184/149‑1 (MQ=255) ggCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCt > 3:98668/1‑149 (MQ=255) ggCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGCGCCCC‑‑‑GAACCCGTTTGGTtcct > 1:279876/1‑145 (MQ=255) ggCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGCGCCCC‑‑‑GAACCCGTTTGGTtcct < 2:279876/145‑1 (MQ=255) aaCTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTc < 3:274953/115‑1 (MQ=255) aaCTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTc > 4:274953/1‑115 (MQ=255) aCTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAg > 2:285321/1‑149 (MQ=255) atcaAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGaa > 1:156949/1‑149 (MQ=255) tcaAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAAt < 2:215388/149‑1 (MQ=255) aaGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGc < 3:113171/149‑1 (MQ=255) aggca‑ggcTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGcc > 7:246954/1‑149 (MQ=255) aggca‑ggcTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGcc < 4:98668/149‑1 (MQ=255) ggca‑ggcTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCg > 2:81166/1‑149 (MQ=255) ggca‑ggcTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCg > 5:156876/1‑149 (MQ=255) a‑ggcTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGtta > 5:302030/1‑148 (MQ=255) cggggggCAGAGAATATCGGTG‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAg < 4:203576/144‑1 (MQ=255) gtgtGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAgg > 1:218316/1‑149 (MQ=255) gtgtGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAg < 6:156876/148‑1 (MQ=255) tgGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGc > 7:97753/1‑147 (MQ=255) gCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAg < 6:302030/148‑1 (MQ=255) cAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGc > 8:221186/1‑149 (MQ=255) agagAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGt > 6:40376/1‑58 (MQ=255) agagAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGt < 5:40376/58‑1 (MQ=255) gagaATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGcc > 6:93793/1‑148 (MQ=255) gagaATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGcc > 2:231455/1‑148 (MQ=255) gaATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAg < 8:97753/149‑1 (MQ=255) aaTATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAgg > 5:338336/1‑149 (MQ=255) atatCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCCTTGCCTAgg < 1:118651/148‑1 (MQ=255) tatCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGtt > 2:277399/1‑149 (MQ=255) tatCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGt > 1:309361/1‑148 (MQ=255) tatCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGt > 6:346006/1‑148 (MQ=255) tCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTTCAGTTAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTa < 8:246954/148‑1 (MQ=255) tCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGt < 4:221840/103‑1 (MQ=255) tCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGt > 3:221840/1‑103 (MQ=255) gggT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATTCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCCTTGCCTAgggaacg < 7:329365/148‑6 (MQ=255) ggT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAgggg < 2:346614/149‑1 (MQ=255) gT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGc > 7:113355/1‑149 (MQ=255) aCCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTgg < 8:113355/148‑1 (MQ=255) cGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGgtgt > 6:369211/1‑149 (MQ=255) acaTCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTgcg > 6:321394/1‑149 (MQ=255) aTCGCCCGGCTAGTTTCAGGGCGCCCGTGCAGGGCATGCCATCCTTGGCAAAGCGTGTCTGGGTCAGAGTGCCCCCCAGAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGtt < 1:299767/149‑1 (MQ=255) gCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTg > 7:101157/1‑142 (MQ=255) gCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTg < 8:101157/142‑1 (MQ=255) gCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTGCGCAAtt < 4:94324/149‑1 (MQ=255) cTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGATTGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTGCGCAATTGTGTaa < 1:285321/149‑1 (MQ=255) | CCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGACGACGACGGCGAAAGAATGTTGGCAACTTCATCAAGGCA‑GGCTCGTGTGGCAGAGAATATCGGGT‑TTACCCGCCACATCGCCCGGCTAGTTGCAGGGCGCCCGTGCAGTGAATGCCATCCTTGGCAACGCGTG‑‑AGGGTCAGAGTGCCCC‑‑‑GAACCCGTTTGGTTCCTCCCTGGAGGTGAATGCCGTTCCCTAGGCAAGGCCTAGGTTAGGGGCTGGGTGTTGCGCAATTGTGTAA > NC_002947/4904746‑4905035 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |