| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 353,790 | C→G | 6.1% | R180R (CGG→CGC) | cbcV ← | choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,790 | 0 | C | G | 6.1% | 248.7 / 3.5 | 77 | R180R (CGG→CGC) | cbcV | choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base C (35/37); new base G (2/3); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGAAGC > NC_002947/353646‑353938 | cAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCgg < 8:119498/148‑1 (MQ=255) aGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGc < 1:143412/149‑1 (MQ=255) gTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGc > 5:138434/1‑147 (MQ=255) tCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAg < 2:66138/149‑1 (MQ=255) gAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCgct > 3:307195/1‑149 (MQ=255) aaCACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCGTGGGCCTGGCCCGGGCgctg > 7:179740/1‑149 (MQ=255) acacGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCgctgc < 7:200747/149‑1 (MQ=255) cacGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACAGTTAGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCgctgct > 6:328000/1‑149 (MQ=255) gATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCGTGGGCCTGGCCCGGGCgctggcgat < 8:179740/149‑6 (MQ=255) gATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCa > 5:201598/1‑149 (MQ=255) gATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCAGGGCCAGGCCCACGCGCTGCTGCa > 6:159464/1‑149 (MQ=255) aTGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCAt < 2:326125/149‑1 (MQ=255) ttttGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATgccg < 6:201598/149‑1 (MQ=255) gCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGc > 2:217915/1‑120 (MQ=255) gCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGc < 1:217915/120‑1 (MQ=255) gCTCAGCTTGGCCGGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCa < 5:212004/148‑1 (MQ=255) tCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATGAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCa < 3:341007/146‑1 (MQ=255) tCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAg < 2:316568/121‑1 (MQ=255) tCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCa > 4:341007/1‑146 (MQ=255) tCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCAATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGa > 1:161829/1‑148 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGaaa < 6:138434/148‑1 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg < 1:113476/149‑1 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg > 6:244668/1‑149 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg > 2:113476/1‑149 (MQ=255) gCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGTACGGTTCGTCAATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCGCGGGCCAGGCCCACGCGCTGCTGCATGCCGCGAGAAAGc < 2:69359/149‑1 (MQ=255) ggCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTc < 5:16843/147‑1 (MQ=255) ggCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCAt > 6:106208/1‑149 (MQ=255) ccTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATc < 1:285862/149‑1 (MQ=255) cAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCgg < 2:299017/147‑1 (MQ=255) cAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGc < 7:116530/148‑1 (MQ=255) cAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCa > 8:86350/1‑128 (MQ=255) cAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCa < 7:86350/128‑1 (MQ=255) cTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTgcgc > 6:95366/1‑148 (MQ=255) cATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCAc > 4:221527/1‑149 (MQ=255) aTCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCa < 5:243137/147‑1 (MQ=255) cAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTc < 5:244668/148‑1 (MQ=255) ccTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGccc < 7:314368/149‑1 (MQ=255) ccTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGcc > 7:101097/1‑148 (MQ=255) tGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCccac > 6:72177/1‑149 (MQ=255) gCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCccac > 7:349448/1‑147 (MQ=255) ggATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGc < 8:101097/149‑1 (MQ=255) cAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTc > 7:154746/1‑147 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc < 4:307195/149‑1 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 4:280620/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 4:268641/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 4:147248/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 6:322403/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 3:39652/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 6:316512/1‑149 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGc > 1:279550/1‑149 (MQ=255) tCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTtctc < 8:349448/149‑1 (MQ=255) tCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTtctc < 3:44011/149‑1 (MQ=255) aGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCtcgtc > 4:210401/1‑149 (MQ=255) ggCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGa < 3:210401/149‑1 (MQ=255) aCGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCtt < 2:257815/148‑1 (MQ=255) gTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTgcgc > 1:121272/1‑149 (MQ=255) gTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTGGTCGACGAGAAGCTTgagc < 2:279550/149‑1 (MQ=255) gTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGt < 5:328000/148‑1 (MQ=255) gTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGt < 5:322403/148‑1 (MQ=255) gTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGCCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGt < 5:316512/148‑1 (MQ=255) cagGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCg > 2:59768/1‑149 (MQ=255) agGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCgg < 5:159464/149‑1 (MQ=255) ggATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg < 1:59768/149‑1 (MQ=255) aTGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCg > 3:45329/1‑149 (MQ=255) gTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGAc > 6:193000/1‑149 (MQ=255) cat‑ccatcGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGc < 5:193000/149‑1 (MQ=255) t‑ccatcGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTACGGGCGACCCTGCAt > 8:263747/1‑149 (MQ=255) atcGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTc > 3:185177/1‑149 (MQ=255) atcGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTc < 7:58268/149‑1 (MQ=255) gcAGCGCGTGGGCCTGGCCCGGGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg > 2:77785/2‑131 (MQ=255) gcAGCGCGTGGGCCTGGCCCGGGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg < 1:77785/130‑1 (MQ=255) ccAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAgg > 5:227435/1‑149 (MQ=255) ccAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAgg < 2:365131/149‑1 (MQ=255) ccAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAgg < 5:95366/149‑1 (MQ=255) cAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGc > 8:12999/1‑149 (MQ=255) gcCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCTTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGaa < 5:125136/149‑1 (MQ=255) gcCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCg > 6:125136/1‑147 (MQ=255) ccGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCCCCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGGTCCTTTTCCGGGCGCCCCTGCATTTCCAGGCCGAAGc > 7:211677/1‑149 (MQ=255) | CAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCAGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCAT‑CCATCGCCAGCGCCCGGGCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGAAGC > NC_002947/353646‑353938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |