| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,079,129 | T→A | 7.1% | intergenic (‑374/+23) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,079,129 | 0 | T | A | 7.1% | 250.6 / 7.2 | 85 | intergenic (‑374/+23) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base T (33/46); new base A (4/2); total (37/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
TCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGC > NC_002947/5078983‑5079274 | tCATTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTAtt < 8:171351/147‑1 (MQ=255)tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCATCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTAtt > 6:242546/1‑147 (MQ=255)tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGCAAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTAtt > 3:29086/1‑147 (MQ=255)tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTg < 2:362931/148‑1 (MQ=255) aGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAg < 4:245131/148‑1 (MQ=255) tGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCgg > 3:111009/1‑149 (MQ=255) cgacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGc < 3:261212/149‑1 (MQ=255) gacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCt > 3:297975/1‑149 (MQ=255) gacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCt < 3:148519/149‑1 (MQ=255) gacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGCt < 5:6516/149‑1 (MQ=255) gaTTTTTTTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCtttt < 8:341258/149‑1 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCtttt < 2:271426/149‑1 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGAGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGATCTATTGAGCGGGCtttt > 5:297889/1‑149 (MQ=255) gaTTGTTGTGGATGGGAAAGCACAATTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTAAACCGCAATCATTACAGAAGAGAGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCACTCTCTATTGAGCGGGCtttt > 5:183981/1‑149 (MQ=255) gttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGa < 2:73936/148‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATg < 1:162455/149‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATg < 7:323515/149‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATg < 7:251579/149‑1 (MQ=255) tgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCATCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATggg < 5:242546/148‑1 (MQ=255) tgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATggg < 5:26363/148‑1 (MQ=255) aTGTGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTa < 2:236320/148‑1 (MQ=255) gAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTAtt < 7:175360/122‑1 (MQ=255) gAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTAtt > 8:175360/1‑122 (MQ=255) gAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCg > 5:95589/1‑149 (MQ=255) acaTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTca < 6:137709/149‑1 (MQ=255) aTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcag > 2:224606/1‑148 (MQ=255) aTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCAATAGAATTTATTTGGAGGACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcag > 1:115934/1‑149 (MQ=255) tttGATTTTTGAGTCCGCTCAGCGGCTACAAACTACACCGAAATCATTACATAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTTGCGCAGAAACAAAAAGCCCGCTCTATTGAGCGGGATTTTTGATTGGGGATGGCGGACTcagca < 6:297889/149‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGc > 6:95830/1‑117 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGc < 5:95830/117‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcag > 2:302877/1‑147 (MQ=255) tGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagcag < 8:185949/148‑1 (MQ=255) aTTTTTGAGGCCGCTCAGCGGCTCGAAACTACACCGCAATCATTACAGAAGTGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCTCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGa < 6:123189/148‑1 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACT‑‑ACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTc < 2:69067/148‑1 (MQ=255) aGGCCGCGCAGCGGCTCCAAACTACACCGCAATCATTACAGCAGAGCGGAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAAc < 2:281983/148‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTTAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTg > 2:327865/1‑149 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCg < 1:94242/143‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCg > 2:94242/1‑143 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTg > 3:273730/1‑149 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTg > 8:345273/1‑149 (MQ=255) gCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGa < 4:29086/149‑1 (MQ=255) aGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGc < 5:155037/149‑1 (MQ=255) gCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCt > 6:47763/1‑149 (MQ=255) cGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTc > 1:8251/1‑149 (MQ=255) ggCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGc > 7:211669/1‑116 (MQ=255) ggCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGc < 8:211669/116‑1 (MQ=255) ggCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCggg < 6:127666/97‑1 (MQ=255) ggCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCggg > 5:127666/1‑97 (MQ=255) tCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCAGt > 7:165972/1‑148 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCg > 3:73523/1‑149 (MQ=255) tACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGcc < 4:297975/149‑1 (MQ=255) cacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGcc < 4:273730/147‑1 (MQ=255) acCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGGACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAg < 1:302877/149‑1 (MQ=255) acCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGAt > 6:102061/1‑117 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTa > 1:332556/1‑149 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTa < 2:257373/149‑1 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCCACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTGTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTa > 6:161954/1‑149 (MQ=255) caatcaatACCCAATCGCGTAGATCCACAGGCTCAAGAATTCA‑TTCGCGCACAAACAAAACGCGCTCTCTATTGAGCGGGCTTTTTGATGGGGTATGCCGCACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGGCGAGTAct < 4:39396/149‑1 (MQ=25) aaTCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTActc < 5:176765/149‑1 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTAt < 4:111009/148‑1 (MQ=255) ttACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATcc < 2:8251/149‑1 (MQ=255) agaagaGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCAGTTCGTAGCCGAGTACTCTATCCAGCt < 8:165972/149‑1 (MQ=255) aagaGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt > 4:171272/1‑147 (MQ=255) aagaGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa < 1:224606/149‑1 (MQ=255) agagCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAg < 3:2000/149‑1 (MQ=255) gagCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGc < 7:95855/149‑1 (MQ=255) cGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 3:173346/149‑1 (MQ=255) tCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTcc > 8:97657/1‑149 (MQ=255) cGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 2:16421/142‑1 (MQ=255) cGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAgatcc > 1:16421/1‑145 (MQ=255) aCAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGt > 1:138828/1‑148 (MQ=255) aGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGAt < 2:138828/149‑1 (MQ=255) ggCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGc < 1:134362/129‑1 (MQ=255) ggCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGc > 2:134362/1‑129 (MQ=255) tCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATgg > 8:17089/1‑147 (MQ=255) aaGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGt > 6:244193/1‑149 (MQ=255) aaGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTAGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCAGTGATGGTAGt > 3:5693/1‑149 (MQ=255) aGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGtt < 6:95589/149‑1 (MQ=255) gAATTCA‑TTTGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGTCTTTTTGATGGGGTATGGCGGACTCACCAGGATTCGAACCTTCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGttt < 7:234696/149‑1 (MQ=255) aTTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTa < 2:115934/149‑1 (MQ=255) gcgcACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGt > 3:218206/1‑149 (MQ=255) gcgcACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGt > 6:86680/1‑149 (MQ=255) caaacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCa < 4:218206/149‑1 (MQ=255) atcaaaAAGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTCGCCGGGTACTCGTGCAGGCTGAGGTATGAGTCGGTGATGGTAGGTTTTGCGTAGGTTACAACt > 3:12019/3‑149 (MQ=18) atcaaaAAGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCGGGGTTCACGTTCCCGCTGAGGTATGAGTCCGTGATGGGAGTTTTTGACGAGGTTACCACt > 5:240509/3‑149 (MQ=21) aacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACt > 1:51606/1‑149 (MQ=255) caaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTgg < 5:161954/149‑1 (MQ=255) aaaaGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCt > 4:5209/1‑149 (MQ=255) gCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGATAGTTTTAGACCAGGTTACCACTGGCTTACTGaaa < 3:171272/149‑1 (MQ=255) tctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACATCGCTGTTCGTATACTAGTAATATAACACACTTAGATATGAGTCCTTTATGGTAGTTTTAGACAAGAATAACACTGGCTTACTGAAATg > 1:330025/1‑149 (MQ=19) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGc < 5:86680/147‑1 (MQ=255) | TCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCA‑TTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGC > NC_002947/5078983‑5079274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |