| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,138,824 | G→T | 5.3% | intergenic (+48/‑85) | PP_4523 → / → PP_4524 | agmatinase/sodium‑solute symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,138,824 | 0 | G | T | 5.3% | 235.0 / 2.8 | 75 | intergenic (+48/‑85) | PP_4523/PP_4524 | agmatinase/sodium‑solute symporter |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base T (2/2); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.16e-01 | |||||||||||
AGTCTCCCCGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGTATG > NC_002947/5138677‑5138972 | aGTCTCCCCGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGGCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGc > 8:54135/1‑149 (MQ=255) ccccGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTATTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAaca > 8:112974/1‑149 (MQ=255) cccGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGCGGGCCCCTGAGGCCCGCCCacac > 7:233582/1‑149 (MQ=255) cccGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAaca > 8:174324/1‑148 (MQ=255) cGCCTTACGACACCACCGGCAACACCTCGCTGCTCGTTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAAcaca > 4:187787/1‑148 (MQ=255) cGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACaa < 5:361914/149‑1 (MQ=255) aCGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGaaa < 6:12103/147‑1 (MQ=255) aCGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTCTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGaaaa < 7:112974/148‑1 (MQ=255) cGACACCACCGGCAACACCTCCCCGCGCGGTGCCAACCTGCTGCTCGAGACGCTCCGCGTGCTACCTGGCGCGGCGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGaaaa < 8:233582/147‑1 (MQ=255) gACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGAc > 1:181271/1‑149 (MQ=255) cacacCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGATCGAGATGCTCTCCGAGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGTGAGGGACACTGAGGCCCGCCAACACAAGAAAAGAc < 1:35421/148‑1 (MQ=255) caccacCGGCAACACCTCGCTGCTCGGTGCCAAACTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGAccg > 6:244562/1‑149 (MQ=255) accaccGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCTCAGTGGCCCTcc > 1:182067/1‑131 (MQ=255) accaccGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCTCAGTGGCCCTcc < 2:182067/131‑1 (MQ=255) caccGTCAACACCTCGCTGCTCGGTGCCAACCTGATGTTCGAGATGCTCAGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCCACACAAGACAAGAccgccg > 8:172977/1‑149 (MQ=255) cGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGgc > 5:379649/1‑149 (MQ=255) cGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGgc > 6:141624/1‑149 (MQ=255) cGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGgc > 2:242193/1‑149 (MQ=255) ggCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGaaaa > 8:48570/1‑137 (MQ=255) ggCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGaaaa < 7:48570/137‑1 (MQ=255) gCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGgcgc > 7:83354/1‑149 (MQ=255) cacCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTg < 1:242193/149‑1 (MQ=255) cTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCa > 2:43279/1‑148 (MQ=255) tCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCaaa > 8:115193/1‑149 (MQ=255) gctgctCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGt > 6:208236/1‑142 (MQ=255) gctgctCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGt < 5:208236/142‑1 (MQ=255) ctCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGccc < 1:190259/148‑1 (MQ=255) tCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCcgc > 3:224629/1‑149 (MQ=255) cGGTTCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCcgcg < 5:366134/149‑1 (MQ=255) aaCCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGa > 4:152394/1‑149 (MQ=255) tgctgTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGAtctc > 6:127296/1‑149 (MQ=255) gctgTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCg > 3:340949/1‑149 (MQ=255) ctgTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGAtctc < 7:68411/147‑1 (MQ=255) ctgTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCg < 7:54135/148‑1 (MQ=255) ttCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCTCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCa > 2:372/1‑148 (MQ=255) gagaTGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCataa < 3:187787/148‑1 (MQ=255) tGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATaaa < 5:202372/148‑1 (MQ=255) ctctGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGa < 2:238679/148‑1 (MQ=255) tctGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCgg < 8:239848/126‑1 (MQ=255) tctGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGAt > 7:262094/1‑148 (MQ=255) tatGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCgg > 7:239848/3‑126 (MQ=255) gCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATc > 5:144757/1‑149 (MQ=255) cGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAAt < 2:181271/147‑1 (MQ=255) gTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCgg < 8:83354/149‑1 (MQ=255) ccTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGAcc < 8:250788/149‑1 (MQ=255) ggCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCgg < 2:102866/140‑1 (MQ=255) ggCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCgg > 1:102866/1‑140 (MQ=255) tggtgCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATg > 1:89954/1‑149 (MQ=255) gTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCggg < 5:7877/131‑1 (MQ=255) gTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCggg > 6:7877/1‑131 (MQ=255) gTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTg < 1:43279/149‑1 (MQ=255) gCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGa > 6:131480/1‑148 (MQ=255) cTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGAca > 2:94625/1‑149 (MQ=255) aCCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAtt > 8:309408/1‑149 (MQ=255) ccGCTCTACCCCGCCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAtt < 6:379649/148‑1 (MQ=255) gCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAttgtt < 6:144757/149‑1 (MQ=255) gCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAttgtt < 1:94625/149‑1 (MQ=255) gCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAttgtt < 4:340949/149‑1 (MQ=255) gCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAttgtt < 7:309408/149‑1 (MQ=255) ctctACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCTCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCAttgttg < 1:372/149‑1 (MQ=255) tctACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCCCGCGGTCGATCTCGCCATAATAAAGATAATAGCGAGCCCCCCAATGGCCATGTACATCAatcttg > 8:43684/1‑148 (MQ=255) ccGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGa > 4:20681/1‑148 (MQ=255) aGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTaca > 5:54386/1‑149 (MQ=255) gCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGc < 5:141624/149‑1 (MQ=255) aTGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCTCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTgg < 5:244562/149‑1 (MQ=255) tGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTgg > 4:152982/1‑148 (MQ=255) agggagggCCACTGAGGCCCGCCAACACACGAAAAGACCTCCGGGCGCCGTGCAAACGCCCTCGCGGTCGATGTCGCCATAATCAAGATACTCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCAt < 7:172977/149‑1 (MQ=255) aGGCCCGCCAACACAAGAAAAGACCGCCTGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCTTTTATTTTTTTTGATATGTTTTTTTTAATGATCTACACCGCTGGCATGCTAGGCCTTgg < 8:262094/147‑1 (MQ=255) aGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGGGCGGTCGATCTGGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTgg < 7:43684/147‑1 (MQ=255) ggCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTg < 5:131480/149‑1 (MQ=255) cccGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGt < 3:20681/149‑1 (MQ=255) cGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCa > 2:186424/1‑129 (MQ=255) cGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCa < 1:186424/129‑1 (MQ=255) cGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGTAt < 7:174324/149‑1 (MQ=255) cGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGTAt > 1:62546/1‑149 (MQ=255) gCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTgg < 2:345003/95‑1 (MQ=255) gCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTgg > 1:345003/1‑95 (MQ=255) gCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGTATg < 5:127296/149‑1 (MQ=255) | AGTCTCCCCGCCTTACGACACCACCGGCAACACCTCGCTGCTCGGTGCCAACCTGCTGTTCGAGATGCTCTGCGTGCTACCTGGCGTGGTGCGTCGCTAATACCGCTCTACCCCGGCAGGAGCCATGAGGGAGGGCCACTGAGGCCCGCCAACACAAGAAAAGACCGCCGGGCGCCGTGCAAACGCCCGCGCGGTCGATCTCGCCATAATAAAGATAATCGGGAGACCCCCAATGGCCTTGGACATCATTGTTGTAATGATCTACACCGCTGGCATGCTAGGCCTTGGCTGGTATG > NC_002947/5138677‑5138972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |