Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,336,185 | C→G | 8.7% | A872G (GCC→GGC) | PP_4695 → | two‑component system sensor histidine kinase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,336,185 | 0 | C | G | 8.7% | 215.0 / 9.2 | 69 | A872G (GCC→GGC) | PP_4695 | two‑component system sensor histidine kinase |
Reads supporting (aligned to +/- strand): ref base C (34/29); new base G (3/3); total (37/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 |
ACCAGAACAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCGAAGAACATCATGGACCGC > NC_002947/5336038‑5336333 | accaGAACAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGcc < 3:12619/149‑1 (MQ=255) aGAACAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGAAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAg > 1:296968/1‑149 (MQ=255) cAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGc > 6:95439/1‑149 (MQ=255) cAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGc < 6:79328/149‑1 (MQ=255) cGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCATCCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGa < 2:251499/149‑1 (MQ=255) gaggagCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGAt > 6:134777/1‑149 (MQ=255) agCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAAc < 2:16531/149‑1 (MQ=255) gCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAAcc < 8:59504/149‑1 (MQ=255) ccTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTcc > 4:188688/1‑148 (MQ=255) gCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGc > 8:67884/1‑149 (MQ=255) aaGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCcg < 2:51723/148‑1 (MQ=255) acaAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCt > 1:343185/1‑149 (MQ=255) acaAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCt > 7:253749/1‑149 (MQ=255) caAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCCTCGCCCGCGATGCCTc > 4:300811/1‑149 (MQ=255) tGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCACCTGGGCCAGGCGCTgc < 5:23199/113‑2 (MQ=255) tGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCACCTGGGCCAGGCGCTgc > 6:23199/1‑112 (MQ=255) aTCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCgg > 1:162537/1‑149 (MQ=255) ggTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAg > 3:17906/1‑149 (MQ=255) tgctgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGcc > 4:178054/1‑149 (MQ=255) tgctgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGcc > 4:183882/1‑149 (MQ=255) ctgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgt > 4:344052/1‑149 (MQ=255) ctgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgt < 3:188688/149‑1 (MQ=255) tgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtg > 5:13669/1‑149 (MQ=255) tgGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtg > 6:82211/1‑149 (MQ=255) gCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtgc < 8:78537/148‑1 (MQ=255) cGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtgcgc < 5:134777/149‑1 (MQ=255) ccGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtgc > 2:19329/1‑140 (MQ=255) ccGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCcgtgc < 1:19329/140‑1 (MQ=255) cGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCa > 5:307019/1‑103 (MQ=255) cGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCa < 6:307019/103‑1 (MQ=255) ccgcAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCCGACCATTCGGACGAAGGTGACCAGCAACGCCTTGCCCAGGTTCTCATCAACCTGCTATCCAACGACCGCGATGCCTCTCCGCCCCCCAGCCCCCTGCGCGTGCGCAGc > 2:116559/2‑148 (MQ=255) cgcAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGa < 7:67884/149‑1 (MQ=255) gcAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAg > 8:64427/1‑149 (MQ=255) gcAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAg > 7:285685/1‑149 (MQ=255) ttCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTaa > 7:63941/1‑149 (MQ=255) ttCGAAGTACAGTTCTTCAACCGTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTaa > 7:55313/1‑149 (MQ=255) cAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCacac > 6:141603/1‑149 (MQ=255) aGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACAcc < 5:141603/149‑1 (MQ=255) gTTCTTCAACCTTTGCGACCCGGAACATTGGGCCGAAGGTGACCCGCAGCTCCTGGCCCAGGTGCTGATCAACCAGCTCTCCAACGCCCGCGATGCCTGGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCg < 1:116559/149‑1 (MQ=255) ttcttcAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGt > 6:137391/1‑149 (MQ=255) tcAACCTTTGCGACCCGGACCATTGGGACGAAGGTGACCCGCAGCGCCAGGCCGAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGGGCAGGGAGGTTTACGAGCACACCGTCGAc > 6:148582/1‑149 (MQ=255) cAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGAcc > 5:26529/1‑149 (MQ=255) cAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGAc < 5:221973/148‑1 (MQ=255) cAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGAc < 8:253749/148‑1 (MQ=255) aCCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCt > 5:318883/1‑148 (MQ=255) tGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGAtc < 5:95439/147‑1 (MQ=255) ccGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGa > 5:50356/1‑149 (MQ=255) ccGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGa < 3:344052/149‑1 (MQ=255) ggACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAg > 7:119982/1‑108 (MQ=255) ggACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAg < 8:119982/108‑1 (MQ=255) ggACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACg < 8:55313/149‑1 (MQ=255) ggACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACg < 4:296095/149‑1 (MQ=255) gACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGa < 8:285685/149‑1 (MQ=255) aCCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGAtcgtc > 4:298834/1‑140 (MQ=255) aCCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGAtcgtc < 3:298834/140‑1 (MQ=255) aCCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGaa < 4:17906/149‑1 (MQ=255) aCCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGaa < 3:178054/149‑1 (MQ=255) aCCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGaa < 3:183882/149‑1 (MQ=255) cATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAgg < 5:82211/149‑1 (MQ=255) ttGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAgg > 3:80680/1‑147 (MQ=255) gCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGaa > 6:117768/1‑141 (MQ=255) gCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGaa < 5:117768/141‑1 (MQ=255) cGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGa > 2:28789/1‑149 (MQ=255) gcgACCCGCAGCGCCTGGCCCAGCTGCTGACCACCCTCCTCTCCAACCCCCGCGACGCCTCGCCGCCCGCCCGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGCTCGTCGAAGACGAAGGCACCGGGATTCCg < 6:50356/147‑1 (MQ=255) tGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCga < 1:28789/149‑1 (MQ=255) gACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCg > 8:86230/1‑147 (MQ=255) gatcAGCACCTGGGCCAGGCGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCgaagaa > 8:297449/4‑149 (MQ=255) tcAGCACCTGGGCCAGGCGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGa < 7:280965/122‑1 (MQ=255) cAGCACCTGGGCCAGGCGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCCAGGTTAACGAGCCCCCCGTCGACCTGAACGACGAAGACGAAGGCACCGGGATGCCCAAAAAca > 7:231459/1‑148 (MQ=255) accTGGGCCCGGCGCTGTTCACCCTGCGCTCCACCGCCCGCGCTGCCTCGCCGCCCGGCAGCGCCGTGGGCGTGCGCAGCGTGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCGAAGAAcatca < 8:231459/146‑1 (MQ=255) cccAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGCTCGTCGAAGCCGAAGGCAGCGGGCTTCCGAAGAACATCATGGACCGc > 4:202952/1‑149 (MQ=255) | ACCAGAACAGCGAGGAGCCCGTGTGCCTGGCTGAAGTGGCACAAGATGCCATCGGTCTGCTGGCGTTGAACCGGCGCAATTTCGAAGTACAGTTCTTCAACCTTTGCGACCCGGACCATTGGGCCGAAGGTGACCCGCAGCGCCTGGCCCAGGTGCTGATCAACCTGCTCTCCAACGCCCGCGATGCCTCGCCGCCCGGCAGCGCCGTGCGCGTGCGCAGCGAGGTTAACGAGCACACCGTCGACCTGATCGTCGAAGACGAAGGCAGCGGGATTCCGAAGAACATCATGGACCGC > NC_002947/5336038‑5336333 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |