| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,489,780 | A→C | 6.1% | M88L (ATG→CTG) ‡ | PP_4825 → | MarC family membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,489,780 | 0 | A | C | 6.1% | 249.8 / 6.9 | 82 | M88L (ATG→CTG) ‡ | PP_4825 | MarC family membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (38/37); new base C (3/2); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.83e-01 | |||||||||||
GCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGAAA > NC_002947/5489632‑5489924 | gcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCa < 1:145153/149‑1 (MQ=255)gcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCa > 5:41905/1‑149 (MQ=255)gcaaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCa > 7:277311/1‑149 (MQ=255) caaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCAt < 3:325808/149‑1 (MQ=255) cTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGc > 1:4796/1‑149 (MQ=255) tGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGcc > 2:55919/1‑149 (MQ=255) tGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGcc > 2:280964/1‑149 (MQ=255) gCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCa < 6:190360/149‑1 (MQ=255) gCCTCGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGcc > 7:142535/1‑147 (MQ=255) cTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAgg < 5:60974/149‑1 (MQ=255) cTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAgg > 8:313821/1‑149 (MQ=255) tGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCATCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAggg > 7:306733/1‑149 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCCCTCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAgg < 1:110791/148‑1 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCCATGCCCAggg < 4:167398/147‑1 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAggg < 8:255867/147‑1 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAggg < 5:3312/147‑1 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGGTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGc < 4:239056/148‑1 (MQ=255) aGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAg > 8:352699/1‑149 (MQ=255) tCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCcg > 7:339932/1‑149 (MQ=255) cgcgTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCcgg > 1:135891/1‑149 (MQ=255) cgTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCcggcg < 8:142535/149‑1 (MQ=255) ggTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGa < 5:360703/147‑1 (MQ=255) gTCGCCAGCGTGTTGGTGAACGTTTTGGGGGGGGCTTTCTTCGTATTTTTCGGCATCC‑‑CCGCGGTTGCTTTCCGCATGGTTGCTGGCAGCGTGGTGTTCATTTCGCCCGTG‑GGAAGGGCCCTGGGCAAGCCGGCGGTACAGGCAGACa < 2:135891/148‑1 (MQ=255) gCCTGCGTGTTGCTGTACCTGTTCGGGCGGGCTATTTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCTGGGCAAGCCGGCGGTACAGGCAGACAACGt < 6:138639/149‑1 (MQ=255) cAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGtt > 5:299862/1‑148 (MQ=255) cAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTc < 7:69713/149‑1 (MQ=255) gtgtTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagca < 3:366550/149‑1 (MQ=255) tgtTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAggg > 8:339782/1‑115 (MQ=255) tgtTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAggg < 7:339782/115‑1 (MQ=255) tgtTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagcag < 7:313821/149‑1 (MQ=255) cTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTc < 4:348420/139‑1 (MQ=255) cTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTc > 3:348420/1‑139 (MQ=255) tACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGGCTTCCGCATCGGTGGTGGCAGCGTGCTGTTCATTTCGGCCCTGCGGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGAtgtg < 1:280964/148‑1 (MQ=255) aCCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGAc > 4:300265/1‑148 (MQ=255) cTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCAt > 1:313302/1‑149 (MQ=255) cgggcgggCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTAc < 8:94286/113‑1 (MQ=255) cgggcgggCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTAc > 7:94286/1‑113 (MQ=255) cgggcgggCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGGGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTa < 3:177827/148‑1 (MQ=255) gggcgggcGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTAcc > 3:236137/1‑149 (MQ=255) ggcgggcgATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCg > 4:1309/1‑149 (MQ=255) ggcgggcgATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCg > 4:169465/1‑149 (MQ=255) gggcgATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTg > 4:31260/1‑149 (MQ=255) gcgATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGAc < 7:118658/149‑1 (MQ=255) gcgATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGAc < 1:55919/149‑1 (MQ=255) gATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGcc < 1:33081/96‑1 (MQ=255) gATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGcc > 2:33081/1‑96 (MQ=255) gAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCCATGCCCAggg > 2:323773/1‑82 (MQ=255) gAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCCATGCCCAggg < 1:323773/82‑1 (MQ=255) gAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCt > 1:340600/1‑148 (MQ=255) gAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTg > 7:260448/1‑149 (MQ=255) tCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGcccc > 5:187932/1‑149 (MQ=255) a‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCg < 2:4796/148‑1 (MQ=255) gATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCAt < 8:339932/149‑1 (MQ=255) tGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCg < 8:260448/149‑1 (MQ=255) ggaaggCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTg > 5:43983/6‑149 (MQ=255) ttCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGc > 2:218543/1‑149 (MQ=255) gCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCctg > 1:324739/1‑149 (MQ=255) gCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCctg > 1:237979/1‑149 (MQ=255) ccATGGGGGCGGGCTGCGTGCTTTCCTTTTGGGCCTTG‑GGCTTGGCCCTGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCGATGGTGccggg < 2:340600/148‑4 (MQ=255) cGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGTTGCCCTGCTgg > 3:337771/1‑149 (MQ=255) ggTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTgg < 4:236137/148‑1 (MQ=255) tGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgg < 7:352699/149‑1 (MQ=255) gCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgggg > 3:31966/1‑149 (MQ=255) cAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATggggg < 6:43983/149‑1 (MQ=255) aGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGt > 6:217404/1‑149 (MQ=255) aGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGt < 3:169465/149‑1 (MQ=255) ctggCTGTTCATTTCGGCCCTG‑GGATGGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGa < 6:41905/146‑1 (MQ=255) ttCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagc > 1:153637/1‑61 (MQ=255) ttCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagc < 2:153637/61‑1 (MQ=255) tCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCg > 3:103904/1‑149 (MQ=255) aTTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCa > 2:329310/1‑149 (MQ=255) aTTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCa > 3:314555/1‑149 (MQ=255) aTTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCa < 4:103904/149‑1 (MQ=255) tttCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCAc > 7:20746/1‑149 (MQ=255) tttCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCAc < 5:217404/149‑1 (MQ=255) gcttgCCCTG‑GGCCATGCCCAGGGCCAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGCTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACt > 4:29699/5‑149 (MQ=255) tCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACt < 7:212763/148‑1 (MQ=255) cgtccTG‑GGCAGGGCCGAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGAAGGATGTTTCCTTCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTgg < 8:306733/145‑1 (MQ=255) gCCCTG‑GGCCATGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGa > 2:131551/1‑149 (MQ=255) gCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGa > 2:321932/1‑149 (MQ=255) cccTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGAt > 7:76230/1‑149 (MQ=255) ccTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATg < 2:346936/124‑1 (MQ=255) ccTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATg > 1:346936/1‑124 (MQ=255) g‑ggCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGaaa < 6:299862/149‑1 (MQ=255) ggCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGaa < 6:187932/147‑1 (MQ=255) | GCAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCA‑‑CCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTG‑GGCATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGAAA > NC_002947/5489632‑5489924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |