| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,491,492 | C→G | 5.1% | intergenic (‑28/+24) | PP_5715 ← / ← PP_5716 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,491,492 | 0 | C | G | 5.1% | 249.3 / 2.9 | 78 | intergenic (‑28/+24) | PP_5715/PP_5716 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base G (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.71e-01 | |||||||||||
GCGGTCAGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGCACCACAGGCAAAATTGGAGG > NC_002947/5491346‑5491640 | gCGGTCAGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCgt > 5:51604/1‑149 (MQ=255) ggTCAGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCgtgt < 2:218863/149‑1 (MQ=255) gTCAGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTc < 7:77105/149‑1 (MQ=255) aGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGAc < 3:198502/149‑1 (MQ=255) gTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCTGTCGACACGGCGTCGAcgg > 2:61319/1‑147 (MQ=255) tAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCTATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAg < 8:169987/148‑1 (MQ=255) cTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTATCGCCCTCCAGGCCTGTCGACACGGCGTCGACGGGcct < 1:61319/149‑2 (MQ=255) ccAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCATTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAAc < 7:260131/147‑1 (MQ=255) ccAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACtt > 3:233253/1‑149 (MQ=255) gCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCAt < 6:177095/149‑1 (MQ=255) cTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATg < 6:51604/149‑1 (MQ=255) aaCATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGt > 7:42868/1‑148 (MQ=255) ccAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATg < 6:84133/141‑1 (MQ=255) ccAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATg > 5:84133/1‑141 (MQ=255) ccAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGt > 2:159270/1‑149 (MQ=255) cAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCGCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGtt > 5:320126/1‑149 (MQ=255) aaCAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCa < 6:357968/143‑1 (MQ=255) aaCAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCa > 5:357968/1‑143 (MQ=255) cAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCa < 8:42868/149‑1 (MQ=255) cTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGc < 7:44143/148‑1 (MQ=255) ttCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCag‑ag < 6:271657/138‑1 (MQ=255) ttCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCag‑ag > 5:271657/1‑138 (MQ=255) gCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCcagcag > 4:42943/1‑149 (MQ=255) cgagcagAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCcagcag < 7:178089/143‑1 (MQ=255) cTCGTGAAGCACTGACATTGTCGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCAt < 6:358113/125‑1 (MQ=255) cTCGTGAAGCACTGACATTGTCGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCAt > 5:358113/1‑125 (MQ=255) gTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGAc < 8:312964/148‑1 (MQ=255) gCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTGAG‑AGTTCCAGTGCCAGCAGGACCTGCAg < 1:205668/149‑1 (MQ=255) gCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCATGACCTGCAg > 1:312424/1‑149 (MQ=255) gCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAg > 4:198614/1‑149 (MQ=255) tGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGc < 7:17541/143‑1 (MQ=255) tGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGc > 8:17541/1‑143 (MQ=255) aCATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCAtt > 5:208754/1‑149 (MQ=255) aTTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGTCATTgt > 1:369667/1‑149 (MQ=255) tgttgtCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTgtcg > 2:328196/1‑149 (MQ=255) tgttgtCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTgtcg > 6:321159/1‑149 (MQ=255) gttgtCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTgtcg < 4:39559/148‑1 (MQ=255) gttgtCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTgtcg > 3:39559/1‑148 (MQ=255) ttgtCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTgtcgtc < 3:198614/149‑1 (MQ=255) tCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAg > 3:356574/1‑149 (MQ=255) gATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGtt > 3:180500/1‑149 (MQ=255) aTCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACGTGCAGGGCATTGGCGTGAAGttt > 8:178948/1‑149 (MQ=255) aaTACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGt < 4:356574/149‑1 (MQ=255) cAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCTGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTa < 1:328196/149‑1 (MQ=255) cAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTc > 7:7395/1‑147 (MQ=255) cAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTc < 8:7395/147‑1 (MQ=255) ttGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCcagc > 5:326776/1‑105 (MQ=255) ttGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCcagc < 6:326776/105‑1 (MQ=255) gTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGaa < 5:321159/149‑1 (MQ=255) aCCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGt < 5:324076/127‑1 (MQ=255) aCCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCATCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGt > 6:324076/1‑127 (MQ=255) ccACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGt < 4:233253/149‑1 (MQ=255) ccACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGt > 5:200720/1‑149 (MQ=255) ccACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGt > 5:205819/1‑149 (MQ=255) acaAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCg > 2:126767/1‑149 (MQ=255) caAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCg > 2:335982/1‑148 (MQ=255) aaaGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTa < 4:333067/149‑1 (MQ=255) aTTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATcggcgg < 6:205819/148‑1 (MQ=255) aTTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATcggcgg < 6:200720/148‑1 (MQ=255) ttGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCggcggc > 4:278751/1‑148 (MQ=255) ggCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTa < 7:178948/148‑1 (MQ=255) gCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATc < 1:159270/149‑1 (MQ=255) gCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGaaa > 5:149580/1‑149 (MQ=255) gCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAAAGGCGCGAACTTTGTCGTATCGGCGGCTATCGaaa > 8:121802/1‑149 (MQ=255) cATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAAt < 3:42943/149‑1 (MQ=255) aTCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAGAAGTTCCAGTGCCAGCAGGACCTGCAg < 1:9356/84‑1 (MQ=255) aTCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAg > 2:9356/1‑83 (MQ=255) tCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTc < 7:55252/127‑1 (MQ=255) tCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTc > 8:55252/1‑127 (MQ=255) gTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTc < 3:328238/146‑1 (MQ=255) gTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTc > 4:328238/1‑146 (MQ=255) ccTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGca > 5:140997/1‑149 (MQ=255) cTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGcac < 6:208754/149‑1 (MQ=255) ccAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGcacca > 8:61922/1‑149 (MQ=255) cAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGcacca < 1:126767/148‑1 (MQ=255) ggCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGCACCACAg < 2:312424/149‑1 (MQ=255) cctgTCGACACGGCGTCGACGGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCt < 8:279130/119‑1 (MQ=255) cctgTCGACACGGCGTCGACGGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCt > 7:279130/4‑122 (MQ=255) cGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGCACCACAGGCAAAATTGGAgg > 1:126641/1‑149 (MQ=255) | GCGGTCAGGTAGGCTGCCAGCTGAACATCCAACAGTGCTTCTGCTCGTGAAGCACTGACATTGTTGTCGATCAATACCAGGCTATTGCCGTTCAACCACAAAGTGTAATTGGCTTGCATCAGTAT‑GCCCTCCAGGCCCGTCGACGCCGTGTCGACAGGCCAACTTCATGGTCAG‑AGTTCCAGTGCCAGCAGGACCTGCAGGGCATTGTCGTCAAGTTTGGTTTCTACAATGGCGCGAACTTTGTCGTATCGGCGGCTATCGAAATTCAACACCGCACCACAGGCAAAATTGGAGG > NC_002947/5491346‑5491640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |