Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,608,307 T→A 7.0% intergenic (‑169/+19) cyaB ← / ← waaA cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,608,3070TA 7.0% 172.1 / 3.0 57intergenic (‑169/+19)cyaB/waaAcyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
Reads supporting (aligned to +/- strand):  ref base T (26/27);  new base A (2/2);  total (28/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01

CTTCCGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTCCACCAGGCGGCGCACCGC  >  NC_002947/5608159‑5608454
                                                                                                                                                      |                                                                                                                                                    
cTTCCGACGCAAGCGTGTTACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCATACATATCCACTCTAGACCGGGTCttt                                                                                                                                                      <  3:4292/149‑1 (MQ=255)
cTTCCGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCttt                                                                                                                                                      <  8:7533/149‑1 (MQ=255)
   ccGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGa                                                                                                                                                    <  6:199287/148‑1 (MQ=255)
   ccGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGa                                                                                                                                                    <  8:216650/148‑1 (MQ=255)
    cGACGCAAGCGTGTTACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTTCGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGt                                                                                                                                                  <  1:286846/149‑1 (MQ=255)
    cGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTCCGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGt                                                                                                                                                  <  1:291272/149‑1 (MQ=255)
      aCGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTg                                                                                                                                                 >  8:27971/1‑148 (MQ=255)
        gCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGa                                                                                                                                               >  1:184519/1‑148 (MQ=255)
        gCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGa                                                                                                                                               >  7:141429/1‑148 (MQ=255)
            gCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATg                                                                                                                                           >  7:53786/1‑148 (MQ=255)
            gCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGt                                                                                                                                          <  3:68215/149‑1 (MQ=255)
                gtgACACTTCTGACTTTTAAAGTCTATTCGTAGTAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATAGCCACTCAAAGACCCGGTCTAGAGTGGATATGTctg                                                                                                                                       <  8:144675/148‑3 (MQ=38)
                gtgACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCttt                                                                                                                                                      <  3:312507/133‑1 (MQ=255)
                gtgACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCttt                                                                                                                                                      >  4:312507/1‑133 (MQ=255)
                   acacTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGGCCGGGTCTTTGAGTg                                                                                                                                                 >  8:289031/1‑135 (MQ=255)
                   acacTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGGCCGGGTCTTTGAGTg                                                                                                                                                 <  7:289031/135‑1 (MQ=255)
                   acacTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTa                                                                                                                                    >  7:24334/1‑148 (MQ=255)
                   acacTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTAt                                                                                                                                   >  8:263942/1‑149 (MQ=255)
                    cacTTCTGACTTTTAAAGTCTATTCTTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTAt                                                                                                                                   <  4:3419/148‑1 (MQ=255)
                      cTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAg                                                                                                                                <  7:27971/149‑1 (MQ=255)
                              ttttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCAAAGACCCGGTCTAGAGTGGatat                                                                                                                                            >  3:210710/1‑129 (MQ=38)
                              ttttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCAAAGACCCGGTCTAGAGTGGatat                                                                                                                                            <  4:210710/129‑1 (MQ=38)
                              ttttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCaa                                                                                                                        <  8:53786/149‑1 (MQ=255)
                                ttAAAGTCTATTCGTAGGAAGTTTCCTTACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGATTCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAg                                                                                                                       <  6:35610/148‑1 (MQ=255)
                                ttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAg                                                                                                                       <  5:94597/148‑1 (MQ=255)
                                ttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAg                                                                                                                       <  2:167531/148‑1 (MQ=255)
                                ttAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAg                                                                                                                       <  2:215682/148‑1 (MQ=255)
                                   aaGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGccc                                                                                                                   >  1:235091/1‑149 (MQ=255)
                                     gTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGcccc                                                                                                                  >  8:19423/1‑148 (MQ=255)
                                                ggAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGa                                                                                                      <  7:263942/148‑1 (MQ=255)
                                                ggAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAg                                                                                                     >  1:220692/1‑149 (MQ=255)
                                                    gTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAAt                                                                                                 >  1:175359/1‑149 (MQ=255)
                                                        ccTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGc                                                                                              <  8:24334/148‑1 (MQ=255)
                                                          tAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAAGCAAGAATCAGACATATCCACTATAGACCGGGTATTTGAGTGGATATTTCGGTTATCAGCGTATCAAGGCCCCCAGACCATCGAGCaaaccat                                                                                             >  1:286249/1‑143 (MQ=255)
                                                            aCGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGc                                                                                           <  2:184519/147‑1 (MQ=255)
                                                             cGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCaaa                                                                                        <  8:141429/149‑1 (MQ=255)
                                                               gCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGc                                                                                      >  5:13336/1‑149 (MQ=255)
                                                                cGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGcc                                                                                     <  2:235091/149‑1 (MQ=255)
                                                                                    gTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCAc                                                                 <  2:180434/149‑1 (MQ=255)
                                                                                         aaCTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCaaa                                                                                        >  5:224934/1‑121 (MQ=255)
                                                                                         aaCTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCaaa                                                                                        <  6:224934/121‑1 (MQ=255)
                                                                                            ttACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGAGTGGCCCGCATCACCGCCCTGc                                                         >  1:283536/1‑149 (MQ=255)
                                                                                            ttACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACACTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGc                                                         >  4:72366/1‑149 (MQ=255)
                                                                                                accGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATCTCGGTTATCAGCGGATCAAGGCGCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGccctc                                                     >  7:239734/2‑147 (MQ=255)
                                                                                                    tAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCa                                                 >  5:339694/1‑149 (MQ=255)
                                                                                                       gAATAAATAACCAGAATCAGACATATCCACTCGTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCAcc                                               >  1:230694/1‑149 (MQ=255)
                                                                                                       gAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCAccc                                              <  7:268005/149‑1 (MQ=255)
                                                                                                       gAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCGCAcc                                               >  7:198718/1‑148 (MQ=255)
                                                                                                             ataaCCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATgcgc                                        >  7:250835/1‑149 (MQ=255)
                                                                                                                aCCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTgg                                     <  2:175359/149‑1 (MQ=255)
                                                                                                                aCCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTg                                      <  6:339694/148‑1 (MQ=255)
                                                                                                                  ccAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTggg                                    >  4:329136/1‑149 (MQ=255)
                                                                                                                       aTCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCCCCCGGCCCGCCTCACCCATGCGCTGGGCGTcc                               >  7:333875/1‑149 (MQ=255)
                                                                                                                           gACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCg                           <  2:283536/149‑1 (MQ=255)
                                                                                                                            aCATATCCACTCAAAGACCCGGTCTAGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCgg                          >  8:211010/1‑149 (MQ=38)
                                                                                                                                 tCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGt                      <  7:19423/148‑1 (MQ=255)
                                                                                                                                    aCTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTc                    >  1:111010/1‑148 (MQ=255)
                                                                                                                                           gACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTCCACCAggc            <  3:72366/149‑1 (MQ=255)
                                                                                                                                              cGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTc                                <  5:127878/126‑1 (MQ=255)
                                                                                                                                              cGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTc                                >  6:127878/1‑126 (MQ=255)
                                                                                                                                                  tCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTCCACCAGGCGGCGCAc     >  2:76292/1‑149 (MQ=255)
                                                                                                                                                     ttGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTCCACCAGGCGGCGCACcgc  >  2:95969/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CTTCCGACGCAAGCGTGTGACACTTCTGACTTTTAAAGTCTATTCGTAGGAAGTTTCCTAACGGCGAGAAATCCAGTGTAGGAAGTTACAACTTACGCCGTAGGAATAAATAACCAGAATCAGACATATCCACTCTAGACCGGGTCTTTGAGTGGATATGTCGGTTATCAGCGGATCAAGGCCCCCAGACCCTCGAGCAATCGCTGCAAAGCCCCCTGATTGGCCCGCATCACCGCCCTGCCCGCCTCACCCATGCGCTGGGCGTCCTGCGGCAGTTCCACCAGGCGGCGCACCGC  >  NC_002947/5608159‑5608454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: