Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,612,017 C→G 7.8% R337R (CGC→CGG) ‡ PP_4931 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,612,0170CG 7.8% 234.7 / 7.8 76R337R (CGC→CGG) ‡PP_4931hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (32/38);  new base G (3/3);  total (35/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

CGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGG  >  NC_002947/5611873‑5612164
                                                                                                                                                |                                                                                                                                                    
cgcagcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCctgc                                                                                                                                                  >  5:310396/1‑149 (MQ=255)
  cagcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGCCAACGCCTTCCTTGCCGACCAGCAGCGCctgctg                                                                                                                                                >  8:199287/1‑149 (MQ=255)
  cagcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCctgctg                                                                                                                                                <  1:263528/149‑1 (MQ=255)
    gcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt                                                                                                                                              <  7:137313/149‑1 (MQ=255)
     cgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggtg                                                                                                                                             <  7:64036/149‑1 (MQ=255)
        agAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTcgg                                                                                                                                           >  4:242081/1‑148 (MQ=255)
         gAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCt                                                                                                                                         <  7:299940/149‑1 (MQ=255)
          aaGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTg                                                                                                                                        >  8:24015/1‑149 (MQ=255)
          aaGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTCGGcaa                                                                                                                                        <  3:242081/149‑3 (MQ=255)
           aGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTgg                                                                                                                                       <  6:348702/149‑1 (MQ=255)
            ggAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGc                                                                                                                                      <  1:133544/149‑1 (MQ=255)
            ggAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGATGAGCCTGCACAATCCGGCCTGGCACGCCCGGCCAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGc                                                                                                                                      >  6:250804/1‑149 (MQ=255)
             gAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGcc                                                                                                                                     <  3:93288/149‑1 (MQ=255)
             gAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGcc                                                                                                                                     <  3:88183/149‑1 (MQ=255)
              aaaTCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTCGGcaaggaa                                                                                                                                    <  4:100012/149‑7 (MQ=255)
               aaTCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTCGGcaaggaag                                                                                                                                   >  5:261909/1‑142 (MQ=255)
                 tCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGACCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTCCAGCTGGGCTGGCCGAc                                                                                                                                  >  7:179552/1‑148 (MQ=255)
                   gACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCa                                                                                                                                >  7:67940/1‑148 (MQ=255)
                     cAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAac                                                                                                                             >  7:292334/1‑149 (MQ=255)
                       aCCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactg                                                                                                                           <  6:23600/149‑1 (MQ=255)
                        ccTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactgg                                                                                                                          >  2:220476/1‑149 (MQ=255)
                            ctgcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcact                                                                                                                      <  1:220476/149‑1 (MQ=255)
                               ccATGGGTCGTTCTGAGCGTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGGAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcactgg                                                                                                                    <  8:179552/148‑1 (MQ=255)
                               ccATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACTCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCAGACCAAactggcactgg                                                                                                                    >  5:203672/1‑148 (MQ=255)
                               ccATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcactggc                                                                                                                   <  7:24015/149‑1 (MQ=255)
                                 ctGGTTCGCTCAGAGCCGGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACtggcactggcac                                                                                                                 <  8:234863/148‑1 (MQ=255)
                                  tGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAcc                                                                                                                >  7:36745/1‑149 (MQ=255)
                                        gATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACtt                                                                                                          >  2:99175/1‑149 (MQ=255)
                                         aTCAGAGCCTGGTGATCTGGGCCACACTGCGCGTCTACAGAGCTGAGCATGCACAATACTTACTGTCACGCCAGGACAAAGCCTTCCTTGCCGACCAGCATCTCCTTCTGGTGGGCTGGCAGAAAAAACtgtcactggcacatgaatt                                                                                                          >  3:105119/1‑141 (MQ=255)
                                          tCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACtt                                                                                                          >  2:4015/1‑147 (MQ=255)
                                                  tGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCgg                                                                                                >  1:244410/1‑149 (MQ=255)
                                                    gTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCggg                                                                                               <  5:28328/148‑1 (MQ=255)
                                                            ggCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑c                                                                                      <  2:282379/148‑1 (MQ=255)
                                                             gCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTTGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCa                                                                                    <  3:310467/149‑1 (MQ=255)
                                                                  acTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTg                                                                                >  5:365895/1‑148 (MQ=255)
                                                                   cTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTg                                                                                >  7:143508/1‑147 (MQ=255)
                                                                    tGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAg                                                                             >  2:240564/1‑149 (MQ=255)
                                                                      cgcgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAgc                                                                            <  6:310396/148‑1 (MQ=255)
                                                                      cgcgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAgc                                                                            <  8:153757/148‑1 (MQ=255)
                                                                            gACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACgg                                                                     >  3:79974/1‑149 (MQ=255)
                                                                            gACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACg                                                                      <  4:105119/148‑1 (MQ=255)
                                                                              ccGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCa                                                                   >  5:319823/1‑149 (MQ=255)
                                                                                  gcTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGAACTTGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCg                                                               <  3:54731/149‑1 (MQ=255)
                                                                                      aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCCACCTGGAGCGCGACGGCATTCGTc                                                             <  1:4015/148‑1 (MQ=255)
                                                                                      aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTc                                                             <  1:99175/147‑1 (MQ=255)
                                                                                      aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCca                                                           >  4:312617/1‑149 (MQ=255)
                                                                                      aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCca                                                           >  5:352487/1‑149 (MQ=255)
                                                                                            cacaATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGc                                                      <  4:79974/148‑1 (MQ=255)
                                                                                              caATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGcaca                                                   <  8:67940/149‑1 (MQ=255)
                                                                                              caATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGca                                                     >  3:80780/1‑147 (MQ=255)
                                                                                               aaTCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAg                                                  <  2:244410/149‑1 (MQ=255)
                                                                                                 tCCGGCCTGGCACGCCCGGACAACGCCGTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGCCTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGc                                                >  8:140729/1‑149 (MQ=255)
                                                                                                   cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGt                                                              >  4:360480/1‑133 (MQ=255)
                                                                                                   cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGt                                                              <  3:360480/133‑1 (MQ=255)
                                                                                                     gCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGAc                                            <  5:113549/149‑1 (MQ=255)
                                                                                                     gCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGAc                                            <  7:2759/149‑1 (MQ=255)
                                                                                                       cTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCt                                          >  8:33477/1‑149 (MQ=255)
                                                                                                          gCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                        <  1:147543/148‑1 (MQ=255)
                                                                                                            aCGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccg                                     <  6:352487/149‑1 (MQ=255)
                                                                                                              gCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccgac                                   <  4:80780/149‑1 (MQ=255)
                                                                                                               cccGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccgacc                                  <  1:240564/149‑1 (MQ=255)
                                                                                                                ccGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCt                                 <  8:36745/149‑1 (MQ=255)
                                                                                                                  ggACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGc                               <  7:33477/149‑1 (MQ=255)
                                                                                                                   gACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGcc                              >  4:152450/1‑149 (MQ=255)
                                                                                                                        cGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGCCCGCCCTGCCACGcc                         >  8:157196/1‑149 (MQ=255)
                                                                                                                        cGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGcc                         <  6:319823/149‑1 (MQ=255)
                                                                                                                          ccttccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCt                       >  5:60287/1‑149 (MQ=255)
                                                                                                                           cttccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTc                      >  3:215120/1‑149 (MQ=255)
                                                                                                                              ccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccga                                    >  5:297815/1‑132 (MQ=255)
                                                                                                                              ccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccga                                    <  6:297815/132‑1 (MQ=255)
                                                                                                                                ttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACaa                                                        <  2:9454/110‑1 (MQ=255)
                                                                                                                                ttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACaa                                                        >  1:9454/1‑110 (MQ=255)
                                                                                                                                     caCCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTg                 <  8:106629/143‑1 (MQ=255)
                                                                                                                                     caCCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTg                 >  7:106629/2‑144 (MQ=255)
                                                                                                                                         agcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCg        <  3:312617/149‑1 (MQ=255)
                                                                                                                                          gcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCgg       >  8:318853/1‑149 (MQ=255)
                                                                                                                                              cgcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTg   <  3:152450/149‑1 (MQ=255)
                                                                                                                                               gcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTgg  <  8:292334/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAG‑CCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGG  >  NC_002947/5611873‑5612164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑