| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,725,652 | C→G | 6.5% | P438P (CCG→CCC) | opgH ← | glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,725,652 | 0 | C | G | 6.5% | 247.3 / 7.0 | 77 | P438P (CCG→CCC) | opgH | glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base C (34/38); new base G (3/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.65e-01 | |||||||||||
CTTGAGCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAACTGCTGCATG > NC_002947/5725505‑5725799 | cTTGAGCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCg > 5:269081/1‑149 (MQ=255)cTTGAGCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCg < 4:335166/149‑1 (MQ=255) gCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCgg < 3:320701/145‑1 (MQ=255) gCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCgg > 4:320701/1‑145 (MQ=255) tCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAATCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACgg > 1:178201/1‑149 (MQ=255) tCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGACAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCACCgg > 6:94756/1‑149 (MQ=255) gTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACgg < 7:244919/147‑1 (MQ=255) tCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCGTTGCCGGGCAAAGgcgc < 7:116630/149‑1 (MQ=255) aGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAg > 2:200297/1‑149 (MQ=255) gCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAgg < 3:197649/149‑1 (MQ=255) gTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGgcg > 7:115033/1‑148 (MQ=255) tGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAATCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAg < 2:178201/148‑1 (MQ=255) gcAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑Tc > 6:109682/1‑148 (MQ=255) aGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCGACACACCGCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAAGGCGCCTTTGCCCGGCAACGGGGCCAGGGCGCAGTGC‑TCGAt < 2:230821/149‑1 (MQ=255) gTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATg < 6:158144/149‑1 (MQ=255) tcttcGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGaa > 3:52472/1‑149 (MQ=255) cGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACgg < 2:71203/148‑1 (MQ=255) gCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTc < 7:124266/148‑1 (MQ=255) cTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCTGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCAt < 4:261204/149‑1 (MQ=255) tGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCGTTGCCGGGCAAAGgc > 8:138641/1‑116 (MQ=255) tGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCGTTGCCGGGCAAAGgc < 7:138641/116‑1 (MQ=255) tCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATcgc > 5:126231/1‑149 (MQ=255) cGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATcgc < 7:323823/148‑1 (MQ=255) gTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGt > 3:321224/1‑149 (MQ=255) gTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGt > 6:190297/1‑149 (MQ=255) aGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTtg > 3:208925/1‑149 (MQ=255) acAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTtgtg < 5:94756/148‑1 (MQ=255) cAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGTAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTgg < 2:363860/149‑1 (MQ=255) cAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTgg > 3:337806/1‑149 (MQ=255) aaTCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGc > 3:15525/1‑149 (MQ=255) tCCTCACACCCCAGCCGGCACGGCGCATCAGCACAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGccc < 4:31277/149‑1 (MQ=255) acacacCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGccc > 6:58703/1‑146 (MQ=255) acacCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCag > 5:207112/1‑147 (MQ=255) acacCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCag > 8:126600/1‑147 (MQ=255) acacCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGCATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCagta < 5:117089/149‑1 (MQ=255) acCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCagtagt < 6:269081/149‑1 (MQ=255) cccAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGgcg < 3:61161/95‑1 (MQ=255) cccAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGgcg > 4:61161/1‑95 (MQ=255) cccAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGc < 1:200297/149‑1 (MQ=255) ccAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAgg < 4:34092/91‑1 (MQ=255) ccAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAgg > 3:34092/1‑91 (MQ=255) ccGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTc < 8:115033/149‑1 (MQ=255) cGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCa < 5:109682/149‑1 (MQ=255) gcATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGc < 3:73447/149‑1 (MQ=255) aTCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCa < 5:141980/149‑1 (MQ=255) aGCTCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGaa < 6:223406/149‑1 (MQ=255) gcgcAGCTTCGACGAAGTCGTGGGTAAAGGATGGCACCGCCCAACGCGCATTTCCCCGCCAACGGCGCAAGGGCGCATTCA‑TCGATGACCGGGTACATCCGGATGATCCCGTGTTGGCCCAAGAAGTGCGAc > 7:53937/1‑132 (MQ=255) gcgcAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGTCTTTGCCCGGCAACGGCGCGAGGTCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGAc < 8:53937/131‑1 (MQ=255) gcgcAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGAc > 1:15361/1‑131 (MQ=255) gcgcAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGAc < 2:15361/131‑1 (MQ=255) cgcAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGt < 4:337806/149‑1 (MQ=255) gcAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTg < 4:321224/149‑1 (MQ=255) gaAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTtgt < 3:168709/101‑1 (MQ=255) gaAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTtgt > 4:168709/1‑101 (MQ=255) tGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAg < 4:52472/149‑1 (MQ=255) gg‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTg > 3:265813/1‑149 (MQ=255) g‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGcc < 4:316340/95‑1 (MQ=255) g‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGcc > 3:316340/1‑95 (MQ=255) g‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTgg > 5:4050/1‑149 (MQ=255) g‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTgg > 4:27002/1‑149 (MQ=255) aaaGGATGGCACCGGCGAACGCGCCTTTGCGCGGCAACGGCGCCAGGGCGCAGTGCGTCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTgg > 1:101168/1‑149 (MQ=255) aaaGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTggg < 3:27002/149‑1 (MQ=255) ggATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCg < 4:265813/149‑1 (MQ=255) cACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACCcg > 7:149833/1‑149 (MQ=255) cACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACAcg > 3:46447/1‑149 (MQ=255) aCCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACAcgc > 1:114137/1‑149 (MQ=255) aCCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACAcgc < 6:4050/149‑1 (MQ=255) aCCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACAcgc > 5:39798/1‑149 (MQ=255) ccctggcgcCGTTGCCGGGCAAAGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCggg > 2:348675/6‑147 (MQ=255) aaCGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGc > 4:188087/1‑149 (MQ=255) aaCGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGc > 6:94744/1‑149 (MQ=255) tggcgcCGTTGCCGGGCAAAGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCTACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGc > 8:306101/3‑148 (MQ=255) gcgcCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGAATCACCCAACTGCCAGAAGTGCAGACCGGCa > 8:150379/1‑117 (MQ=255) cgcCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAAc < 5:190297/149‑1 (MQ=255) ccTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAActg < 4:46447/149‑1 (MQ=255) ccTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAActg < 1:178303/149‑1 (MQ=255) tGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAActgct < 6:207112/147‑1 (MQ=255) ccGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAACTGCTGCATg > 8:236950/1‑149 (MQ=255) | CTTGAGCTCGTCAAGCAGGTTTGGCGGCAGTTCTTCGTAGCTGCCCGGCAAGTCGTAGGCAATCCACACACCCCAGCCGGCACGGCGCATCAGCGCAGCTTCGACGAAGTCGTGGG‑AAAGGATGGCACCGGCGAACGCGCCTTTGCCCGGCAACGGCGCCAGGGCGCAGTGC‑TCGATGAACGGCTTCATGCGGATGATCGCGTTGTGGCCCCAGTAGTGCGACTCACCCAACTGCCAGAAGTGCAGACCGGCAGTGAACAGTGGGCCGTACACGCGGGTAGCGAACTGCTGCATG > NC_002947/5725505‑5725799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |