| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,790,620 | A→T | 7.3% | intergenic (‑24/+33) | PP_5073 ← / ← hemE | hypothetical protein/uroporphyrinogen decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,790,620 | 0 | A | T | 7.3% | 235.5 / 7.7 | 82 | intergenic (‑24/+33) | PP_5073/hemE | hypothetical protein/uroporphyrinogen decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (37/39); new base T (3/3); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.46e-01 | |||||||||||
CCAGCCGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAG > NC_002947/5790472‑5790762 | ccagccGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTATCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCa < 4:326460/149‑1 (MQ=255) cagccGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGAAt > 3:328638/1‑149 (MQ=255) gccGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCTATGGGACAAGATTAGCGCCGATCGATGATTTGAATCTTAAC‑GTTCAAAAAACCCGGCAGCg > 8:154385/1‑149 (MQ=255) ccGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGAATTTCATGATAATCGGCTCCTGTTTCGGTTTCGATCGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCg > 7:194617/1‑148 (MQ=255) aaTGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCg < 4:321463/149‑1 (MQ=255) cgacgcCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCgg < 8:249570/146‑1 (MQ=255) aTGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCgg < 4:283292/149‑1 (MQ=255) aTGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCgg < 2:264318/149‑1 (MQ=255) tGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCTTCGATGCCggg > 4:162119/1‑149 (MQ=255) cgcCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGtt < 5:350192/149‑1 (MQ=255) cAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCTTCGATGCCGGGttttt < 3:162119/149‑3 (MQ=255) aGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACt < 3:335775/149‑1 (MQ=255) cTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACtgtg < 8:63790/148‑1 (MQ=255) aCAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTgtgcagtg > 7:227915/1‑149 (MQ=255) aCAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGACGGGTTTAGTgtgcagtg > 2:60370/1‑149 (MQ=255) aaGGGGGCGAGGATGAGGGCGAGAAAACGGATTTTCATGATAATCGGGAACTGTTTCAATTTCTAAGGGACCAGATTAGCGACGATCACAGAATTCAAACTTTAC‑GTACATAAAACCCGGCAACGAAGCAGGGTTTACTttgcagtgaa > 7:232181/1‑147 (MQ=255) gggggCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATc < 3:74648/149‑1 (MQ=255) ggCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAg > 4:274847/1‑149 (MQ=255) ggCGAGGATGAGGGCGACATAACTGATTTTTATTAAAATCGGGTCCTGTTTCGGTTTCGATGGGAACATATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAATCCCTGCATTTAAGCCTGGTTTACTGTGCAGTGCATCaat < 8:232181/149‑2 (MQ=255) aGGGCGATAGAACGGATTTTCATGTTATTCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATGGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACtggtg < 8:194617/148‑1 (MQ=255) gggCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACtggtgg > 2:278948/1‑148 (MQ=255) ggCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCgg < 1:152628/115‑1 (MQ=255) ggCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCgg > 2:152628/1‑115 (MQ=255) agaTAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTgc < 6:17169/149‑1 (MQ=255) aaCGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGcc > 7:341753/1‑148 (MQ=255) aaCGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGAATCAAGTCACTGGTGGTAATGCGcc > 3:187403/1‑148 (MQ=255) aCGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGa > 6:121298/1‑149 (MQ=255) cGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGAc < 5:121298/149‑1 (MQ=255) cGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGAc < 3:93750/149‑1 (MQ=255) ggATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGaa < 3:275542/99‑1 (MQ=255) ggATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCCAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGa > 2:123722/1‑147 (MQ=255) aTTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGt < 6:294364/149‑1 (MQ=255) aTTTTCATGATAATCGGGGCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGAGCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGt < 6:299422/149‑1 (MQ=255) gATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCAc > 8:29354/1‑149 (MQ=255) gggTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGtt > 5:205982/1‑148 (MQ=255) ggTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTtga < 7:109778/149‑1 (MQ=255) cTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGaa < 3:274847/149‑1 (MQ=255) tGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAAt > 3:99591/1‑149 (MQ=255) gtttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATg > 3:38786/1‑149 (MQ=255) tttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTgc > 2:336399/1‑117 (MQ=255) tttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCa < 7:43678/133‑1 (MQ=255) tttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCa > 8:43678/1‑133 (MQ=255) ttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTtg < 5:166137/140‑1 (MQ=255) ttcggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTtg > 6:166137/1‑140 (MQ=255) ggtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCAcc < 4:38786/148‑1 (MQ=255) gtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGt > 3:153358/1‑125 (MQ=255) gtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGt < 4:153358/125‑1 (MQ=255) gtttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCg > 5:271214/1‑149 (MQ=255) tttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCg > 5:158611/1‑148 (MQ=255) tttcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCg > 2:86057/1‑148 (MQ=255) tatcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCg > 5:38209/3‑148 (MQ=255) tcgATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCa < 7:29354/148‑1 (MQ=255) gATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATg < 7:57444/148‑1 (MQ=255) gggACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCAc < 4:108051/121‑1 (MQ=255) gggACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCAc > 3:108051/1‑121 (MQ=255) gACCAGATTAGCGACGATCGCTGAATTCAAACTTAACGGTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCCCGGCGTTGATGAATGCACCCGCATGTTCCg > 1:250951/1‑149 (MQ=255) cAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTg < 6:25390/113‑1 (MQ=255) cAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTc < 1:278948/149‑1 (MQ=255) gacgaTCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCgg > 1:68766/1‑149 (MQ=255) acgaTCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCTTCGATGCCGGGtttt > 7:212145/1‑55 (MQ=37) acgaTCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCTTCGATGCCGGGtttt < 8:212145/56‑2 (MQ=37) tCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGa > 4:60443/1‑149 (MQ=255) gCTTAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGAt < 8:341753/148‑1 (MQ=255) aTTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTg < 2:250951/149‑1 (MQ=255) ttCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTgg < 5:19474/149‑1 (MQ=255) ttCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTgg > 3:61949/1‑149 (MQ=255) ttCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTgg < 1:86057/149‑1 (MQ=255) aaC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGtt < 7:154385/148‑1 (MQ=255) c‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGaa < 6:271214/149‑1 (MQ=255) c‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGaa < 8:227915/149‑1 (MQ=255) c‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGaa < 2:68766/149‑1 (MQ=255) cAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGaa > 5:322868/1‑145 (MQ=255) cAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGaa < 6:322868/145‑1 (MQ=255) aaaaaaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCAGGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACAt > 1:117862/1‑149 (MQ=255) aaaaaaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCgg > 8:185906/1‑108 (MQ=255) aaaaaaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCgg < 7:185906/108‑1 (MQ=255) aaaaaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATg < 3:60443/149‑1 (MQ=255) taaaCCCGGCTTCGATGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTgg < 4:326692/130‑1 (MQ=255) taaaCCCGGCTTCGATGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTgg > 3:326692/2‑131 (MQ=255) aaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGc > 7:123334/1‑148 (MQ=255) aaCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGc > 6:42793/1‑148 (MQ=255) aCCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGc > 3:23221/1‑147 (MQ=255) cccGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAg > 8:248452/1‑149 (MQ=255) | CCAGCCGCAAATGCGCCAGTGCTGAACAAGGGGGCGAGGATGAGGGCGAGATAACGGATTTTCATGATAATCGGGTCCTGTTTCGGTTTCGATGGGACCAGATTAGCGACGATCGCTGAATTCAAACTTAAC‑GTACAAAAAACCCGGCATCGAAGCCGGGTTTACTGTGCAGTGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAG > NC_002947/5790472‑5790762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |