| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,844,774 | G→C | 8.3% | V466L (GTG→CTG) ‡ | PP_5122 → | GMC family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,844,774 | 0 | G | C | 8.3% | 215.8 / 7.1 | 70 | V466L (GTG→CTG) ‡ | PP_5122 | GMC family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (29/35); new base C (4/2); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01 | |||||||||||
ACACGTCCAGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTAT > NC_002947/5844632‑5844920 | acacGTCCAGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATCTGATgg > 3:200845/1‑149 (MQ=255) acGTCCAGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGggc < 4:196766/149‑1 (MQ=255) gTCCAGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGggcgg > 1:211457/1‑149 (MQ=255) aGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAGCCGCCCATCACATGggcgctgc < 3:353757/149‑5 (MQ=255) aGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgc < 5:231047/149‑1 (MQ=255) aGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgc < 6:345860/149‑1 (MQ=255) aGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgc < 7:166899/149‑1 (MQ=255) aGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgc < 8:185845/149‑1 (MQ=255) cGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCg > 2:4575/1‑149 (MQ=255) cGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATCACATGggcgctgc > 2:248594/1‑137 (MQ=255) cGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATCACATGggcgctgc < 1:248594/141‑5 (MQ=255) aCCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGAccc > 6:334971/1‑149 (MQ=255) ccATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCcgc > 1:255664/1‑149 (MQ=255) ccATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCcgc > 3:55248/1‑149 (MQ=255) ccccGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCAcgcg > 2:6018/1‑149 (MQ=255) cccGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCgg > 5:354309/1‑149 (MQ=255) ccGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGgt > 8:59467/1‑149 (MQ=255) ccGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGgt < 3:362789/149‑1 (MQ=255) ccGGTGCATAGCCACGCCAGCGCCGGCTCAAGCCTGGAACAGGCCCTGACCATGAACGACAAACAGCGCCTGGATCCCTCATCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCAcgcg < 1:299381/149‑1 (MQ=255) cATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCAcgcg > 7:284228/1‑141 (MQ=255) cATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCAcgcg < 8:284228/141‑1 (MQ=255) cATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGa > 7:240820/1‑149 (MQ=255) aTAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGa > 5:155303/1‑148 (MQ=255) tAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATTGGCGGCTGCGCCCTCGGCGAATACGCGCGCCACGCGGTGTGCGACa < 6:152935/149‑1 (MQ=255) gCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGc > 8:254016/1‑149 (MQ=255) gACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCt < 2:50383/149‑1 (MQ=255) cAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGgcc > 6:132741/1‑149 (MQ=255) gcgcCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGgccgc < 7:254016/149‑1 (MQ=255) ccgccTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCAt < 6:253855/149‑1 (MQ=255) ctctAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgcg < 1:229416/95‑1 (MQ=255) ctctAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTgcg > 2:229416/1‑95 (MQ=255) tAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATggg < 3:123534/84‑1 (MQ=255) tAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATggg > 4:123534/1‑84 (MQ=255) cTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTgg > 3:321682/1‑148 (MQ=255) tGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGa > 2:103221/1‑148 (MQ=255) aaCAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAAc < 2:255664/149‑1 (MQ=255) gCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTc < 5:334971/149‑1 (MQ=255) ccTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGa < 2:211457/149‑1 (MQ=255) ccTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGa > 4:116969/1‑149 (MQ=255) ccTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGa > 5:80101/1‑149 (MQ=255) aCCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCa < 6:354309/149‑1 (MQ=255) cATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCCCGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCac > 4:315122/1‑148 (MQ=255) cATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCacg > 3:42988/1‑149 (MQ=255) cATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCac > 1:32758/1‑148 (MQ=255) aTGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGaaa < 4:226060/133‑1 (MQ=255) aTGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGaaa > 3:226060/1‑133 (MQ=255) tGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCCAGCTGGAAAACCTGTCGATTCacga < 1:4575/149‑1 (MQ=255) tCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGt < 6:186719/149‑1 (MQ=255) aCAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCGGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCa < 5:206117/149‑1 (MQ=255) cAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCAc > 5:134251/1‑149 (MQ=255) aaaCTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACt < 6:80101/149‑1 (MQ=255) cgcCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTc < 1:6018/147‑1 (MQ=255) gcCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACCGTTccc > 8:330660/1‑148 (MQ=255) cTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCccac < 6:134251/149‑1 (MQ=255) ggAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCccacca < 5:10021/149‑1 (MQ=255) t‑‑tCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCgg > 2:219357/1‑149 (MQ=255) aCGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCaa > 6:300838/1‑149 (MQ=255) cgcTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAAccc < 8:240820/149‑1 (MQ=255) gcTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGgccgc > 3:39614/1‑80 (MQ=255) gcTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGgccgc < 4:39614/80‑1 (MQ=255) tGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCTCGCGGTGTGCGACTGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCGGCACCAGCATCGGCGCCTACGGGCaa < 4:42988/149‑1 (MQ=255) gggCAG‑CGCCCATGTGATGGGCGGCTGCGCCGTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTAGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCaa < 5:132741/148‑1 (MQ=255) agccgcCCATCACATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGt > 3:363228/4‑149 (MQ=255) agccgcCCATCACATGGGCGGCTGCGCCCACGGCGAAGACCCGCGCCACCCGGTGTGCGACCCCCTGGGACGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACCGTTCACTGTTCCCCACACGCATCCGCGCCAACCCCCAATTGt > 2:284465/4‑149 (MQ=255) aG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTc < 1:103221/149‑1 (MQ=255) g‑cgcCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCg < 3:315122/149‑1 (MQ=255) cgcCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCgg < 2:32758/149‑1 (MQ=255) cccATGTGATGGTCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGgtg < 4:244813/149‑1 (MQ=255) ccATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGgtgt > 3:200914/1‑149 (MQ=255) aTGTGAGGCGCGGCTGCGCCCGCGGCGAAGTCCCGCGCCACGCGGTGTGCGACAGCCTGTGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTAt < 4:200845/149‑1 (MQ=255) gtgATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTc > 5:282762/1‑140 (MQ=255) gtgATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTCTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTc < 6:282762/140‑1 (MQ=255) | ACACGTCCAGTTTGCCGCTGGCGCCACCCATGTAACCCCGGTGCATAGCGACGCCAGCGCCGCCTCTAGCCTGGAACAGGCCCTGACCATGATCGACAAACTGCGCCTGGAGCCCT‑‑TCCGCACGCGCTTGGGCAG‑CGCCCATGTGATGGGCGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCA‑CCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTAT > NC_002947/5844632‑5844920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |