| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,944,535 | C→T | 11.1% | intergenic (‑301/+39) | PP_5211 ← / ← PP_5212 | ChaC‑related protein/iron‑sulfur‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,944,535 | 0 | C | T | 11.1% | 217.9 / 13.4 | 81 | intergenic (‑301/+39) | PP_5211/PP_5212 | ChaC‑related protein/iron‑sulfur‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (35/37); new base T (3/6); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
AGGCCGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTG > NC_002947/5944390‑5944682 | aGGCCGCTTTTCCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGATTACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTTCTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAAt < 8:152688/149‑1 (MQ=255) cGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTAcc < 3:249250/149‑1 (MQ=255) tttACCAAGGGCGATTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGAGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGAGGTGAAAGTTAATGGCCAAGCCGGTAACAATTACCGc > 8:247199/1‑148 (MQ=255) tccAAGGGCGGTGGCGGTAACCTTAGGCCAGTATTGCTGGAATACTCAAGCCCTTGAGCACGAGATTCTTACTCGTCTCAGACGACTTGTAAGTTCTGTTTCATCAGGTGTGAAAGTTATTGCCGAAGGCGGTAACAATTACCgggtt < 6:38863/147‑5 (MQ=255) ccAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAATTGTTACCGCCttg < 8:307665/148‑2 (MQ=255) ccAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAATTGTTACCGCCttg < 3:252620/148‑2 (MQ=255) ccAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACCGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAATTGTTACCGCCttg < 3:225046/148‑2 (MQ=255) ccAAGGGCGCTTGCGGTAACCATAGGCCAGAATTCCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATCCACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAATTGTTACCGCCttg < 1:316526/148‑2 (MQ=255) aaGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATAc < 2:29013/149‑1 (MQ=255) aGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATAcc > 6:279925/1‑149 (MQ=255) gggCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATAcc > 3:228816/1‑148 (MQ=255) cgcTTGCTGTAAGCATAGGACAGAATTGCATTAATACTCAAGCCCTTGAGCACTCGTTTCATACACGGCTCCGACGACTTTGAAGTACTGTTTCAGCAGCTGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATa < 7:165338/149‑1 (MQ=255) tAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAAc > 4:211815/1‑149 (MQ=255) ccATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTc < 3:7544/149‑1 (MQ=255) gCCAGAATTGCAGGAACACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGttat > 2:90564/1‑149 (MQ=255) cAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACAGCCTTATACCGATACTTTCAAACTTCGGttatt > 7:102825/1‑148 (MQ=255) aGAATTTCAGGAATACTCAAGCCCTTGAGCAAGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTaa < 4:324218/149‑1 (MQ=255) ttGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACcgc > 1:79992/1‑149 (MQ=255) gCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACcgcgc > 3:39637/1‑149 (MQ=255) ggAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCgcgcggc < 4:39637/149‑1 (MQ=255) ggAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCgcgcggc < 7:279808/149‑1 (MQ=255) gAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCgcgcggcg > 6:223209/1‑149 (MQ=255) cTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta > 7:36102/1‑130 (MQ=255) cTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta < 8:36102/130‑1 (MQ=255) cTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTa < 3:211815/148‑1 (MQ=255) cTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAg < 4:228816/149‑1 (MQ=255) tCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAgg > 5:358971/1‑149 (MQ=255) tCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAgg > 7:244276/1‑149 (MQ=255) tCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAgg > 3:40396/1‑149 (MQ=255) tCAAGCCCTTGAGCACGCGTTTAATACACAGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAAATACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAgg > 1:228386/1‑149 (MQ=255) aaGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta > 5:177303/1‑127 (MQ=255) aaGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta < 6:177303/127‑1 (MQ=255) gAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACAt < 1:90564/148‑1 (MQ=255) gAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACAt < 4:17952/148‑1 (MQ=255) aGCACGCGTTTCATACACTGCTCCGACGACTGGGAAGTACTGTTTCAGCATCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCTCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATc < 7:247199/148‑1 (MQ=255) gCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCgg > 1:16196/1‑149 (MQ=255) gcgTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAg > 4:196624/1‑132 (MQ=255) gcgTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAg < 3:196624/132‑1 (MQ=255) ttcacGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGATAGTTATTGCCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGt < 5:376152/147‑1 (MQ=255) cacGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTgc < 4:40396/149‑1 (MQ=255) acGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTgcg > 1:292870/1‑149 (MQ=255) cTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATc > 1:225555/1‑149 (MQ=255) tCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAac < 5:251741/122‑1 (MQ=255) tCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAac > 6:251741/1‑122 (MQ=255) gacTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCg > 7:71617/1‑149 (MQ=255) tGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCt > 6:79556/1‑149 (MQ=255) tGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAggg > 3:283702/1‑149 (MQ=255) tGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAggg > 8:109929/1‑149 (MQ=255) cagcGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGc < 4:283702/149‑1 (MQ=255) cagcGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGc < 6:358971/149‑1 (MQ=255) agcGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCg > 6:361028/1‑149 (MQ=255) gcGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGt < 4:214090/149‑1 (MQ=255) cGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTg < 8:71617/149‑1 (MQ=255) cGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTg < 5:279925/149‑1 (MQ=255) gTGACAGTTCTTGGCCCAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGc < 8:102825/149‑1 (MQ=255) gTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTgg > 1:124635/1‑148 (MQ=255) gAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCa > 2:21343/1‑148 (MQ=255) aaaGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATa < 8:244276/149‑1 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGa < 2:341250/125‑1 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGa > 1:341250/1‑125 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCa > 7:316571/1‑145 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCa > 2:246243/1‑145 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAg > 6:269424/1‑148 (MQ=255) aGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGa < 2:79992/149‑1 (MQ=255) gTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGAt < 5:223209/149‑1 (MQ=255) ttATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATc < 2:16196/149‑1 (MQ=255) aTTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCa < 3:134420/148‑1 (MQ=255) ggCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGtt > 3:39030/1‑149 (MQ=255) gCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTc < 5:361028/149‑1 (MQ=255) aaGGCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTg > 1:41797/1‑131 (MQ=255) aaGGCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTg < 2:41797/131‑1 (MQ=255) ggCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGt > 6:238320/1‑147 (MQ=255) ggCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGa < 1:21343/149‑1 (MQ=255) ggCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGa < 5:269424/149‑1 (MQ=255) gCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCa < 6:226976/138‑1 (MQ=255) gCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCa > 5:226976/1‑138 (MQ=255) ggTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGcc > 2:261726/1‑149 (MQ=255) gTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGc < 7:335737/147‑1 (MQ=255) gTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGc > 8:335737/1‑147 (MQ=255) aCAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTg < 2:292870/149‑1 (MQ=255) aCAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTg > 4:266474/1‑149 (MQ=255) | AGGCCGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTG > NC_002947/5944390‑5944682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |