Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 437,484 T→G 10.1% A292A (GCA→GCC)  rdoA ← serine/threonine protein kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947437,4840TG10.1% 176.4 / 7.5 59A292A (GCA→GCC) rdoAserine/threonine protein kinase
Reads supporting (aligned to +/- strand):  ref base T (24/29);  new base G (4/2);  total (28/31)
Fisher's exact test for biased strand distribution p-value = 4.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

AGAGGCGGGCGTGCTTCTAGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGTTGCCGG  >  NC_002947/437336‑437626
                                                                                                                                                    |                                                                                                                                              
agagGCGGGCGTGCTTCTAGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCtt                                                                                                                                                <  7:88767/149‑1 (MQ=255)
  agGCGGGCGTGCTTCTAGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTgc                                                                                                                                              <  6:184500/149‑1 (MQ=255)
              ttCTAGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGgcgc                                                                                                                                   >  8:266670/1‑148 (MQ=255)
                  aGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAg                                                                                                                              >  6:144116/1‑149 (MQ=255)
                   gAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCtata                                                                                                                               <  7:32239/147‑1 (MQ=255)
                   gAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCtata                                                                                                                               <  5:279438/147‑1 (MQ=255)
                   gAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCtata                                                                                                                               <  6:134637/147‑1 (MQ=255)
                   gAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGt                                                                                                                             <  6:170393/149‑1 (MQ=255)
                      cAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCa                                                                                                                          <  8:337442/149‑1 (MQ=255)
                             aGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGgcg                                                                                                                   >  7:252728/1‑149 (MQ=255)
                                 gAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAgg                                                                                                               >  2:190920/1‑149 (MQ=255)
                                 gAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAgg                                                                                                               <  7:266670/149‑1 (MQ=255)
                                          ccAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGgcgcg                                                                                                          >  6:54424/1‑145 (MQ=255)
                                          ccAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGgcgcg                                                                                                          <  5:54424/145‑1 (MQ=255)
                                          ccAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      >  5:147115/1‑149 (MQ=255)
                                           cAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      <  6:2542/148‑1 (MQ=255)
                                           cAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      <  1:190920/148‑1 (MQ=255)
                                           cAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      <  2:91350/148‑1 (MQ=255)
                                            aGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgggg                                                                                                    >  4:113149/1‑149 (MQ=255)
                                              cgcAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCt                                                                                                  <  5:159404/149‑1 (MQ=255)
                                                   ccATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGAt                                                                                              >  3:151659/1‑148 (MQ=255)
                                                     aTCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAg                                                                                           >  8:150639/1‑149 (MQ=255)
                                                         gTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGc                                                                                        >  5:94151/1‑148 (MQ=255)
                                                          ttCGCGCAAGGCGAGTATCTGGTCGCCCGAGTAGCGTGGCTGGCCGAAGCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGc                                                                                        <  6:63153/147‑1 (MQ=255)
                                                          ttCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAgg                                                                                          <  3:113149/145‑1 (MQ=255)
                                                              cgcAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTc                                                                                  <  7:269840/149‑1 (MQ=255)
                                                                 aaGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGACGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCCGCCCGGCGCTATAGTGCAGCTGGCGCCGGGCGCGCAGGGGCTCGATCAGGGCCAGGTcgcg                                                                               >  8:267843/1‑149 (MQ=255)
                                                                  aGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTcgcgc                                                                              <  2:188471/149‑1 (MQ=255)
                                                                          aTCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGaa                                                                      <  8:252728/149‑1 (MQ=255)
                                                                               gTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGt                                                                    <  5:144116/146‑1 (MQ=255)
                                                                               gTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGt                                                                 <  4:117354/149‑1 (MQ=255)
                                                                                 cGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGgcgcgc                                                                                                         >  5:207756/1‑107 (MQ=255)
                                                                                 cGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGgcgcgc                                                                                                         <  6:207756/107‑1 (MQ=255)
                                                                                 cGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTgg                                                               <  7:176963/149‑1 (MQ=255)
                                                                                  gCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCg                                                                                                >  6:373395/1‑115 (MQ=255)
                                                                                  gCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCg                                                                                                <  5:373395/115‑1 (MQ=255)
                                                                                    cccAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      >  6:280592/1‑107 (MQ=255)
                                                                                    cccAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAgg                                                                                                      <  5:280592/107‑1 (MQ=255)
                                                                                    cccAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGaa                                                                      >  5:106551/1‑139 (MQ=255)
                                                                                    cccAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGaa                                                                      <  6:106551/139‑1 (MQ=255)
                                                                                      cAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTc                                                          >  2:281592/1‑149 (MQ=255)
                                                                                                gctggcCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCg                                                >  3:183323/1‑149 (MQ=255)
                                                                                                 ctggcCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGt                                               <  4:183323/149‑1 (MQ=255)
                                                                                                      cGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATc                                          <  6:94151/149‑1 (MQ=255)
                                                                                                       gAACCAAGGGAAGCTGGGCGGGAACACCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCa                                         >  8:229827/1‑149 (MQ=255)
                                                                                                                      gggCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGACCTCGTTGTAGCCGTCGATCCGCTCGGCCAGTTGcc                          >  8:158954/1‑149 (MQ=255)
                                                                                                                                  cGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGTTCAGCTCGGCCAGTTGCCCCAGGCGctcct              >  2:348370/1‑149 (MQ=255)
                                                                                                                                         tcCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGtt       <  7:150639/149‑1 (MQ=255)
                                                                                                                                         tcCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGtt       >  4:340126/1‑149 (MQ=255)
                                                                                                                                         ctataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGtt       >  5:336228/5‑149 (MQ=255)
                                                                                                                                          tataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGctc                >  7:330605/4‑139 (MQ=255)
                                                                                                                                          tataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGctc                <  8:330605/136‑1 (MQ=255)
                                                                                                                                          tataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGTTg      >  7:5516/4‑149 (MQ=255)
                                                                                                                                           ataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAgg                     <  5:333640/131‑1 (MQ=255)
                                                                                                                                           ataGCGCCTGGCTGGCAAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTAGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAgg                     >  6:333640/3‑133 (MQ=255)
                                                                                                                                             aGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGtt                                                       >  8:130380/1‑97 (MQ=255)
                                                                                                                                             aGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGtt                                                       <  7:130380/97‑1 (MQ=255)
                                                                                                                                              gcgcCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGTTGCCgg  >  8:38488/1‑149 (MQ=255)
                                                                                                                                                 ccTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAg                               >  2:202817/1‑117 (MQ=255)
                                                                                                                                                 ccTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAg                               <  1:202817/117‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
AGAGGCGGGCGTGCTTCTAGAACAATTTCAGCGGAGCTTCATCCAGCGCAGCCATCTGTTCGCGCAAGGCGAGAATCTGGTCGCCCCAGTAGCGTGGCTGGCCGAACCAAGGGAAGCTGGGCGGGAACGCCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGCGGTTGCCGG  >  NC_002947/437336‑437626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑