| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,809 | G→A | 19.7% | intergenic (+103/‑443) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,809 | 0 | G | A | 19.7% | 166.8 / 31.1 | 76 | intergenic (+103/‑443) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base G (26/35); new base A (8/7); total (34/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.37e-01 | |||||||||||
GGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGG > NC_002947/5988661‑5988955 | ggCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAg > 4:25805/1‑149 (MQ=255)ggCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAg < 4:130991/149‑1 (MQ=255) ttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGgccagtccctc > 1:280062‑M2/99‑144 (MQ=255) ggTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTc < 7:213093/149‑1 (MQ=255) tggagctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCt > 6:13142/1‑149 (MQ=255) gagctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtg < 5:13142/148‑1 (MQ=255) cgcctgggacgtggtggcgctggtgttttctgggtctgggaggtgttcggcgggagtgtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCctgc < 6:311481‑M2/55‑2 (MQ=255) ttgttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAcg > 7:136362/1‑149 (MQ=255) gttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtgtg > 5:98034/1‑136 (MQ=255) gttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtgtg < 6:98034/136‑1 (MQ=255) gATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTAGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGcc > 4:228903/1‑149 (MQ=255) tCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGtt < 8:204868/120‑1 (MQ=255) tCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGtt > 7:204868/1‑120 (MQ=255) ggATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCt < 8:153156/148‑1 (MQ=255) aTGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtg > 2:109476/1‑123 (MQ=255) aTGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtg < 1:109476/123‑1 (MQ=255) tGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgcg > 3:324897/1‑149 (MQ=255) tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGcat > 7:99708‑M2/66‑148 (MQ=255) gACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACg > 5:287115/1‑149 (MQ=255) aCTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGc > 4:135369/1‑149 (MQ=255) tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAc < 6:214467/127‑1 (MQ=255) tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAc > 5:214467/1‑127 (MQ=255) gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa > 2:206032/1‑148 (MQ=255) cctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGa > 8:347006‑M2/58‑148 (MQ=255) ttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 2:261915/147‑1 (MQ=255) ttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 3:135369/147‑1 (MQ=255) ccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTacaaa > 1:76049‑M2/43‑149 (MQ=255) ccTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTAGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTacaaa < 3:228903/149‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGAcgc > 4:67674/1‑103 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGAcgc < 3:67674/103‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTacaaa > 3:309300/1‑148 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTacaaa > 5:177704/1‑148 (MQ=255) ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtgtg > 3:253608/1‑96 (MQ=255) ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCtgtg < 4:253608/96‑1 (MQ=255) ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc > 3:45969/1‑135 (MQ=255) ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 4:45969/135‑1 (MQ=255) agagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAgg < 8:99708‑M2/112‑1 (MQ=255) aGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAg < 8:145654/148‑1 (MQ=255) gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGc > 1:145793/1‑149 (MQ=255) gtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCgg < 2:76049‑M2/115‑1 (MQ=255) tcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTATAAACAAGGCGGTc < 5:28520‑M2/117‑1 (MQ=255) tcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTATAAACAAGGCGGTc < 5:23158‑M2/117‑1 (MQ=255) tcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGGTc < 1:321827‑M2/117‑1 (MQ=255) gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTc < 5:182531/148‑1 (MQ=255) gcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGGTcgcgcgc < 7:347006‑M2/123‑1 (MQ=255) tgtgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCg < 8:168878/137‑1 (MQ=255) tgtgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCg > 7:168878/1‑137 (MQ=255) gtgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCGTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACACGGCGGTCGCGCGCGcc > 1:271946/1‑149 (MQ=255) tgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTg < 8:15299/99‑1 (MQ=255) tgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTg > 7:15299/1‑99 (MQ=255) agaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTgg > 5:185004/1‑148 (MQ=255) gaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGca < 6:185004/149‑1 (MQ=255) ttGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGCGCGCGACCGCCttgttt < 6:177704/148‑6 (MQ=25) gcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACaggag < 3:25805‑M2/137‑1 (MQ=255) gccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAggg < 3:295545‑M2/139‑1 (MQ=255) gcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACaggag > 2:130981‑M2/8‑144 (MQ=255) gcccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACaggag < 1:130981‑M2/137‑1 (MQ=255) ccgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTgg > 2:286194‑M2/6‑149 (MQ=255) ccgcgCGGCGCTTCGCGGGGAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTgg < 3:6710‑M2/144‑1 (MQ=255) cgcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc < 4:324897‑M2/145‑1 (MQ=255) gcgCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGcc < 6:303419‑M2/146‑1 (MQ=255) cgggggTTAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTACGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa < 1:286194/145‑1 (MQ=255) cgcgGGTAAACCCGCGCC‑TACGGTTGTTTCGGGCCAGTTATTCCTGTGGGCCGCGCACGCGAGCCCCCTGGCGCACGCCGCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa < 2:271946/147‑1 (MQ=255) gggTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAg < 6:287115/149‑1 (MQ=255) aCCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 4:309300/149‑1 (MQ=255) cGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt > 8:323522/1‑149 (MQ=255) tCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGcac < 7:202268/109‑1 (MQ=255) tCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGcac > 8:202268/1‑109 (MQ=255) c‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAccc < 3:149309‑M2/149‑4 (MQ=255) cGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgc > 7:323522‑M2/1‑143 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 7:270664‑M2/148‑7 (MQ=255) tttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgcc > 1:134560/1‑149 (MQ=14) tCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccg < 6:271488‑M2/149‑15 (MQ=255) cGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcg > 1:189455/1‑149 (MQ=14) cGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGCTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcg > 3:201705/1‑149 (MQ=21) gtgCCAATTATTCCTGCGGGATTTTCGCGCGACCGCCTTGGGGAATGTATCGATATCGCGT‑AGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcgc > 3:165034/3‑149 (MQ=2) gCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg > 6:164376/1‑149 (MQ=14) ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgg < 2:30482‑M2/149‑20 (MQ=255) cAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcggg < 2:154666‑M2/149‑21 (MQ=255) | GGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCC‑TACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGT‑CGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGG > NC_002947/5988661‑5988955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |