| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,158,984 | T→A | 6.8% | intergenic (+321/+547) | PP_5739 → / ← PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,158,984 | 0 | T | A | 6.8% | 211.5 / 4.9 | 73 | intergenic (+321/+547) | PP_5739/PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Reads supporting (aligned to +/- strand): ref base T (29/39); new base A (3/2); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01 | |||||||||||
CGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCG > NC_002947/6158841‑6159132 | cGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAgg > 2:177238/1‑149 (MQ=255) gTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑t > 6:91486/1‑149 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGC‑ttttta < 7:147797/148‑2 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑ttttttt < 3:289175/149‑1 (MQ=255) aTTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt > 6:280593/1‑149 (MQ=255) aTTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 1:177238/149‑1 (MQ=255) aTTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 3:276658/149‑1 (MQ=255) ttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 1:133074/147‑1 (MQ=255) gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTc < 5:91486/149‑1 (MQ=255) cTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCg > 6:269433/1‑149 (MQ=255) tttAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCg > 3:304196/1‑148 (MQ=255) tttAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCg > 5:288148/1‑148 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGA‑TTCGTa > 6:97462/1‑149 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTAt < 6:353487/149‑1 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTAt < 5:96932/149‑1 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTAt < 5:310191/149‑1 (MQ=255) tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTa < 5:280593/149‑1 (MQ=255) ggTTGCGTCATTAATTTTGATTTAGCTATAGTCCTCAACGTTCTACTGTTTCAGTACGTCGCCGACGATCCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGtgc < 4:291814/148‑1 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGATTCAGTACGTCGCCGACGAAACTCTCAATTCGTTGTCTAAAAAGCAGCACTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCAAGTGTc > 5:296650/1‑149 (MQ=255) taattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGc > 2:179161/1‑149 (MQ=255) gATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt > 8:210722/1‑149 (MQ=255) aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt < 7:284635/148‑1 (MQ=255) tAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGAt < 4:304196/148‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt < 5:97462/147‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 2:362943/148‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtg < 1:179161/147‑1 (MQ=255) taGTCCTCAACGTTCGACTGATTCAGTCCGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 4:244615/148‑1 (MQ=255) tCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAg > 6:305897/1‑148 (MQ=255) tCCTCAACGTCCGACTGTCTCAGTACGTCGCAGACGAACCTCTCAATTCGTTGGCTAAAACGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCTTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAg < 8:337646/148‑1 (MQ=255) ccTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAg < 1:92210/148‑1 (MQ=255) ccTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAgg > 8:246072/1‑148 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAATCCGCCCTATGAATGCGGG‑GTTTTTTTTCCTCGGA‑TTAGTATAGGTAACGTGGTTGTGCCAGTGTCGCCGAACTTTATCACTGTGAAGaa > 1:102212/1‑148 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAAc > 6:9959/1‑132 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAAc < 5:9959/132‑1 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACt > 1:195781/1‑130 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACt < 2:195781/130‑1 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAc > 6:165191/1‑146 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCa < 3:42244/148‑1 (MQ=255) ctttCGTCTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCATCTCAAGTCGGC‑TTTTTTTTTCCTAGGA‑TTCGTTTCGTTACCGTCGTGCTGCCAGTTTCGCCGAACTTGATCACTGTGAGGACAAGAt < 6:296650/147‑1 (MQ=255) tCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTAt > 6:186364/1‑149 (MQ=255) aCTGTTTCAGTACGTCTCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt < 5:269433/149‑1 (MQ=255) tttGAGTTCGTCGCCGACGAACCTCTCAATTGGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGTACTTGATCACTGTGAGGACCAGATTATCATGCg < 3:176001/148‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGtgc < 1:235613/101‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGtgc > 2:235613/1‑100 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGc < 5:305897/147‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCg < 7:210722/148‑1 (MQ=255) tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGAt > 3:43997/1‑120 (MQ=255) tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGAt < 4:43997/120‑1 (MQ=255) ccGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAaccacc > 2:228619/1‑149 (MQ=255) acgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt < 7:246072/149‑1 (MQ=255) ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGt > 6:228995/1‑149 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGtt > 8:228879/1‑149 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGt > 4:39990/1‑148 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt > 7:109446/1‑138 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt < 8:109446/138‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 2:102212/149‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 7:228879/149‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 5:228995/149‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc > 2:30666/1‑149 (MQ=255) ttCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgtg > 8:175892/1‑137 (MQ=255) ttCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgtg < 7:175892/137‑1 (MQ=255) gTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGt < 3:39167/148‑1 (MQ=255) aaaaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc > 1:4354/4‑99 (MQ=37) aaaaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc < 2:4354/96‑1 (MQ=37) aaaaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc > 1:142317/4‑148 (MQ=255) aaaaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc > 3:52791/3‑148 (MQ=255) aGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGc < 5:30881/149‑1 (MQ=255) ccgccCTCTCATGGCGGC‑TTTTTTTTGCCTCGTA‑TTCGTATCGGTACCGTCGTGCTGCCACTGGCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 4:74146/149‑1 (MQ=255) ccgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 1:30666/149‑1 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgt > 1:324146/1‑149 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTCGATCACTGTGAGGACCAGATTATAATTCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgt > 2:162598/1‑149 (MQ=255) cccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 2:324146/149‑1 (MQ=255) ccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtcg > 4:261421/1‑149 (MQ=255) ctcAACGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 4:193382/124‑1 (MQ=255) tcAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCTCCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCg > 4:327066/1‑149 (MQ=255) | CGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGA‑TTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCG > NC_002947/6158841‑6159132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |