| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,167,904 | A→T | 5.3% | P328P (CCA→CCT) | PP_5407 → | TnsD‑like transposition protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,167,904 | 0 | A | T | 5.3% | 228.0 / 2.6 | 75 | P328P (CCA→CCT) | PP_5407 | TnsD‑like transposition protein |
| Reads supporting (aligned to +/- strand): ref base A (35/36); new base T (2/2); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.05e-01 | |||||||||||
CCAAATGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCAAAAAAGACGT > NC_002947/6167760‑6168050 | ccAAATGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGa < 2:1371/149‑1 (MQ=255) aaaTGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAgg > 1:339923/1‑149 (MQ=255) aaaTGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAgg > 3:95522/1‑149 (MQ=255) aTGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCt < 4:336766/149‑1 (MQ=255) aCCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTa‑aa < 6:371410/149‑1 (MQ=255) cccGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AAc < 8:178035/149‑1 (MQ=255) ccGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACt > 1:164517/1‑149 (MQ=255) ccGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACt > 4:141419/1‑149 (MQ=255) ccGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCAGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACt > 2:316214/1‑149 (MQ=255) gCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCGCTGGGAGGCTagtcact < 2:313919/149‑7 (MQ=255) cAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaa < 2:268251/149‑1 (MQ=255) aaGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaac < 5:1702/149‑1 (MQ=255) ccccGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaactaa < 2:197439/149‑1 (MQ=255) ccGTTGTGACTGCCATCCGTTGAAGCTTCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAaca < 8:247650/149‑1 (MQ=255) tGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGTCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTaa < 3:235033/149‑1 (MQ=255) ccATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCGGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaact > 7:171402/1‑133 (MQ=255) ccATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCGGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaact < 8:171402/133‑1 (MQ=255) ccATCCGTTGAAGCATCTGAGACTGATTTGGAGGCTATTCGGGAGCTTAGAATCATTCGTAAAGGCCTATCAACATTCCGCGAACAAGCAGCAACTTCCAGTGACTAGCCTCACAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGc > 5:259771/1‑149 (MQ=255) cATCCGTTTAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTATAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGc < 7:164267/148‑1 (MQ=255) aTCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGcc > 7:300524/1‑148 (MQ=255) aaGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGc > 3:21778/1‑149 (MQ=255) gCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCAATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGACTATTTCAGcc > 3:85445/1‑148 (MQ=255) tGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCaagg > 2:311015/1‑148 (MQ=255) aGTCTGATTTGGTTGCTATTCTGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCATCGAGGCTA‑AACTTAACTAACACTTTCTTTAATCCTATTTCAGCCCaagga < 8:114125/147‑1 (MQ=255) tCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAaggaagga < 8:300524/149‑1 (MQ=255) ggCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGcc > 4:65080/1‑149 (MQ=255) ggCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGAAGCAACTTACAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTTACTAAAACTTTATTTAAGCTTATTTCAGACAAAGGAAGGAGAACTGGTgac > 7:39080/1‑147 (MQ=255) gCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGccc > 5:244488/1‑149 (MQ=255) gCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGccc > 1:47208/1‑149 (MQ=255) gCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGccc > 1:52564/1‑149 (MQ=255) tATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGcccc > 4:217153/1‑148 (MQ=255) cGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGaaa < 4:95522/148‑1 (MQ=255) gggAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAAcc < 5:269592/149‑1 (MQ=255) ggAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAAccc < 2:164517/149‑1 (MQ=255) gAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACt < 3:141419/149‑1 (MQ=255) aaTCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGaaa < 3:365934/137‑1 (MQ=255) aaTCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTa < 7:247330/149‑1 (MQ=255) aaTCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGATA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGaaa > 4:365934/1‑137 (MQ=255) ataaTTAGTTAAGGCATATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTAt < 6:259771/146‑1 (MQ=255) cGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAAt < 4:85445/148‑1 (MQ=255) aGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTg < 3:65080/149‑1 (MQ=255) ggCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaactaac > 7:163555/1‑73 (MQ=255) ggCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTtaactaac < 8:163555/73‑1 (MQ=255) ccTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAAc > 4:357599/1‑109 (MQ=255) aTCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTAGTTAATGACTTGAAg > 2:176191/1‑146 (MQ=255) aaCATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGaa > 8:72807/1‑148 (MQ=255) aTGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAAtc < 2:339923/149‑1 (MQ=255) cgcgAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTATAACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAAtcctc > 1:81941/1‑149 (MQ=255) cgcgAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTAt < 3:147612/122‑1 (MQ=255) cgcgAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTAt > 4:147612/1‑122 (MQ=255) cgcgAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCATATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAAtcctcc < 7:229674/149‑1 (MQ=255) cccctaCCAGCATCAACATACAGCGCCTATCCCCCCACCGAGGCTA‑AAAATAAATAACACTTTCATTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAAtcctcc < 4:202701/144‑1 (MQ=255) gcgAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCcg > 3:180272/1‑149 (MQ=255) cagcagCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACt > 7:141761/1‑149 (MQ=255) cagcagCAACTTCCAGTGACTAGCCT‑CCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACt > 2:88923/1‑148 (MQ=255) cagcaACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGATACCCAAAAAACTATTTAATGACTTGAAGGAGCAAATCGTCCGCGAACtgct > 4:233725/1‑147 (MQ=255) cagcaACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACtgat < 7:72807/149‑1 (MQ=255) cagcaACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACtgat < 4:21778/149‑1 (MQ=255) caACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGAc > 1:359369/1‑149 (MQ=255) cTTCCAGTGACTAGTCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTgg < 1:311015/149‑1 (MQ=255) ttaagtttAGCCTCGCTGGGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGgcgc > 7:59966/8‑148 (MQ=255) aattGACTAGCCTACCAGCTAGTCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAATGAGAACTTGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAATGAGAAAATCCTCCGCGAACTTATGACTGgcgc < 8:39080/145‑1 (MQ=255) gtttAGCCTCGCTGGGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGc > 5:51875/4‑148 (MQ=255) cTAGCCT‑CCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaaaa < 1:88923/149‑1 (MQ=255) tAGCCTCCCAGCGAGGCTA‑AACTTAAGTAAGACTTTCTTTAAGCCTATTTCAGCCCATGGAAGGAGAACTGGTGCCCCGATACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaat > 5:354827/1‑147 (MQ=255) tAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaaa > 2:285065/1‑148 (MQ=255) gCCTCGCTGGGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaaaaaa < 6:51875/149‑1 (MQ=255) ccTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCAAAAAAg < 3:217153/149‑1 (MQ=255) tCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAACGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaaaaaa < 4:71373/146‑1 (MQ=255) tCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAAGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCaaaaaa > 3:71373/1‑146 (MQ=255) cccAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCAAAAAAGACg > 6:170407/1‑149 (MQ=255) ccAGCGAGGCTA‑AACTTAACTACCACTTTCTTTAAGCCTATTTCAGACCAAGGATGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATGCTCCGCTAACTGATGACTGTCGCCAGCAAAAAAGCCGt > 6:89710/1‑149 (MQ=255) ccAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTAAATTACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCAAAAAAGAc < 1:316214/147‑1 (MQ=255) cAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCa < 6:88678/135‑1 (MQ=255) cAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCa > 5:88678/1‑135 (MQ=255) | CCAAATGACCCGCAAGCCCCGTGGTTACTGCCATCCGTTGAAGCATCTGAGTCTGATTTGGTGGCTATTCGGGAGCTTAGAATCATTCGTTAAGGCCTATCAACATGCCGCGAACCAGCAGCAACTTCCAGTGACTAGCCTCCCAGCGAGGCTA‑AACTTAACTAACACTTTCTTTAAGCCTATTTCAGCCCAAGGAAGGAGAACTGGTGCCCCGAAACCCAAAAAACTATTTAATGACTTGAAGGAGAAAATCCTCCGCGAACTGATGACTGGCGCCAGCAAAAAAGACGT > NC_002947/6167760‑6168050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |