| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 467,101 | C→T | 9.1% | intergenic (‑34/+19) | PP_5445 ← / ← PP_t71 | hypothetical protein/tRNA‑Met |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 467,101 | 0 | C | T | 9.1% | 213.3 / 9.3 | 77 | intergenic (‑34/+19) | PP_5445/PP_t71 | hypothetical protein/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base C (31/39); new base T (3/4); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.92e-01 | |||||||||||
CGCGCTGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGA > NC_002947/466953‑467245 | cgcgcTGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATc < 6:124401/149‑1 (MQ=255) gcTGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATcgcg > 4:159694/1‑149 (MQ=255) cTGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATcgcgc > 5:60127/1‑149 (MQ=255) tGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATcgcgcg > 4:47766/1‑149 (MQ=255) ggTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATcgcgcg < 7:204695/147‑1 (MQ=255) gTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGAGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCt < 6:60127/149‑1 (MQ=255) tGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCtt > 1:104500/1‑149 (MQ=255) aCCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGTCCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCttt < 1:272337/148‑1 (MQ=255) aCCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCGATTGCGCGGCttt < 7:125808/148‑1 (MQ=255) aCCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCttt < 2:104500/148‑1 (MQ=255) aCCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGGCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCttt < 8:317614/148‑1 (MQ=255) cttGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATc < 5:83810/148‑1 (MQ=255) cttGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCt > 3:319373/1‑149 (MQ=255) gtggGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCtggtg > 8:28874/1‑149 (MQ=255) ttCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACg > 6:351898/1‑148 (MQ=255) cGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGa < 3:211597/148‑1 (MQ=255) gCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACt > 1:305089/1‑149 (MQ=255) cTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTc > 5:219494/1‑149 (MQ=255) cTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTc < 3:159694/149‑1 (MQ=255) tGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCGATTGCGCGGCTTTTTcat > 3:62303/1‑123 (MQ=255) tGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCGATTGCGCGGCTTTTTcat < 4:62303/125‑3 (MQ=255) tGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTc > 7:294115/1‑148 (MQ=255) tGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTc > 6:312108/1‑148 (MQ=255) agaTACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGaa > 1:328737/1‑149 (MQ=255) agaTACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGaa > 8:179483/1‑149 (MQ=255) aTACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAAcc > 1:180541/1‑149 (MQ=255) cGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGcc > 7:217903/1‑129 (MQ=255) cGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGcc < 8:217903/129‑1 (MQ=255) gTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGa > 1:188728/1‑149 (MQ=255) gTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGa < 3:24907/149‑1 (MQ=255) gTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGa < 5:20460/149‑1 (MQ=255) cgcTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGa < 3:306528/129‑1 (MQ=255) cgcTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGa > 4:306528/1‑129 (MQ=255) gcTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGa < 3:47766/149‑1 (MQ=255) ccAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGa < 7:179483/148‑1 (MQ=255) cAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAATCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGAGGAAAAAAAGATTATGat > 8:333528/1‑147 (MQ=255) aaGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTc > 7:129146/1‑149 (MQ=255) cgttgttGCGGTGGGCGCCGCTGCGCTGGATGTACGGGGCGCTGAGCTTTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTc < 5:103830/142‑1 (MQ=255) aGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATc > 3:191971/1‑101 (MQ=255) aGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATc < 4:191971/101‑1 (MQ=255) gTCATGCGCTCGGCGCCGTTGCGCTGGATGTACTGGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGGGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCct < 8:294115/148‑1 (MQ=255) aTGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACTATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGc > 5:312719/1‑149 (MQ=255) gcTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGCCCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGctcga > 3:155534/1‑147 (MQ=255) tCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCAGCGCAATCGCGCGGCTTTGTCGTATCTGGTGTGCCCACACTGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAAc < 7:333528/149‑1 (MQ=255) ggCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAAcc < 4:319373/148‑1 (MQ=255) ggCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAAcc < 7:28874/148‑1 (MQ=255) gcgcCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCaa < 8:129146/149‑1 (MQ=255) gcgcCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCaa < 5:351898/149‑1 (MQ=255) gctgcgctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTg > 1:94391/1‑110 (MQ=255) gctgcgctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTg < 2:94391/110‑1 (MQ=255) gctgcgctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACt > 8:140875/1‑146 (MQ=255) gctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCtata < 7:140875/149‑1 (MQ=255) ctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTgg > 1:161579/1‑105 (MQ=255) ctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTgg < 2:161579/105‑1 (MQ=255) ctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAg < 2:328737/149‑1 (MQ=255) aTGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTAt < 7:259057/114‑1 (MQ=255) aTGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTAt > 8:259057/1‑114 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGt > 3:244387/1‑95 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGt < 4:244387/95‑1 (MQ=255) cgcgCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAg > 4:294357/1‑148 (MQ=255) ccccTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGt < 6:219494/149‑1 (MQ=255) ccccTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGt < 3:294357/149‑1 (MQ=255) cccTGACCATTTATTTCTTGCGGGCATGAAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTACTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGt > 1:50273/1‑149 (MQ=255) ccATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGa < 2:180541/149‑1 (MQ=255) cATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGGAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGAt < 4:164745/149‑1 (MQ=255) atttatttCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGAtt < 2:305089/149‑1 (MQ=255) atttatttCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGAt > 5:33776/1‑148 (MQ=255) ttGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAgg > 1:10379/1‑149 (MQ=255) gCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAgg < 2:10379/147‑1 (MQ=255) aTG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGt < 6:115548/119‑1 (MQ=255) aTG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGt > 5:115548/1‑119 (MQ=255) aaaaGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCtg < 2:50273/149‑1 (MQ=255) aaaGCCGCGCGATTGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGa > 6:295724/1‑76 (MQ=255) aaaGCCGCGCGATTGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGa < 5:295724/76‑1 (MQ=255) aaaGCCGCGCGATTGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAg < 2:193906/135‑1 (MQ=255) aaaGCCGCGCGATTGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAg > 1:193906/1‑135 (MQ=255) aaaGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCtgt < 6:312719/149‑1 (MQ=255) aaaGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCtgt < 5:312108/149‑1 (MQ=255) gcgcAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATc < 2:188728/149‑1 (MQ=255) gcgcAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATc > 8:43042/1‑149 (MQ=255) aaTCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGa > 6:29413/1‑148 (MQ=255) tCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGtattat < 8:75615/62‑1 (MQ=255) | CGCGCTGGGTGACCGGCTTCTTGGTGGGGCTGATTTCGCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATG‑AAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGA > NC_002947/466953‑467245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |