Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 538,049 | A→G | 7.5% | N143D (AAC→GAC) | rpoB → | DNA‑directed RNA polymerase subunit beta |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 538,049 | 0 | A | G | 7.5% | 230.8 / 6.0 | 80 | N143D (AAC→GAC) | rpoB | DNA‑directed RNA polymerase subunit beta |
Reads supporting (aligned to +/- strand): ref base A (40/34); new base G (3/3); total (43/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 |
TGACCTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCCTGGCTGGACTTCGAGTT > NC_002947/537903‑538197 | tgACCTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAAc < 2:41456/149‑1 (MQ=255) aCCTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACg < 5:16369/148‑1 (MQ=255) cTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTa > 5:103730/1‑149 (MQ=255) cTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTa > 8:192581/1‑149 (MQ=255) cgcgGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTAcc < 8:175656/148‑1 (MQ=255) gcgGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGa < 7:192581/149‑1 (MQ=255) ccACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCgtgt < 3:66730/149‑1 (MQ=255) ccACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCgtgt > 1:53564/1‑149 (MQ=255) cACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGtgtg < 7:150538/149‑1 (MQ=255) aCTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGa > 2:303870/1‑149 (MQ=255) aCTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGa > 1:97632/1‑149 (MQ=255) cGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGt < 2:97632/149‑1 (MQ=255) gTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTc > 1:271667/1‑149 (MQ=255) aaGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTccc < 2:53564/148‑1 (MQ=255) aaGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTcc > 7:175353/1‑147 (MQ=255) aaGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTcc > 8:86609/1‑147 (MQ=255) gTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCt < 6:202480/149‑1 (MQ=255) gcCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATAAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCAc > 5:378967/1‑149 (MQ=255) gATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGtt > 5:350395/1‑149 (MQ=255) atcatcTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGt < 6:103730/147‑1 (MQ=255) atcatcTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTc > 6:265613/1‑149 (MQ=255) atcatcTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTc < 8:280838/149‑1 (MQ=255) atcTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCCAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGAt < 1:69722/125‑1 (MQ=255) atcTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCCAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGAt > 2:69722/1‑125 (MQ=255) cGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGgt < 5:265613/148‑1 (MQ=255) cGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTCgt < 5:289243/148‑1 (MQ=255) aGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCGACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGttc > 3:261377/1‑149 (MQ=255) gAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGttctt > 1:144492/1‑149 (MQ=255) gAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGttctt > 7:87188/1‑149 (MQ=255) aaTCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGttcttc < 4:281390/149‑1 (MQ=255) tcgtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGgt < 3:189566/138‑1 (MQ=255) tcgtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGgt > 4:189566/1‑138 (MQ=255) tcgtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGtt < 6:354538/143‑1 (MQ=255) tcgtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGtt > 5:354538/1‑143 (MQ=255) gtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCa < 5:360262/117‑1 (MQ=255) gtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCa > 6:360262/1‑117 (MQ=255) gtcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGgtg > 1:293474/1‑137 (MQ=255) tcgAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCa > 3:11054/1‑149 (MQ=255) aaaGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCg > 3:185010/1‑149 (MQ=255) aaaGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCg > 1:277726/1‑149 (MQ=255) aaGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGt < 4:11054/149‑1 (MQ=255) aaGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGAc > 6:181810/1‑149 (MQ=255) agagCAAGAAGTCTACATGGGTTAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCgg < 6:350395/149‑1 (MQ=255) gagCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCggg > 1:23428/1‑149 (MQ=255) aagTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGAcc < 6:176660/120‑1 (MQ=255) aagTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGAcc > 5:176660/1‑120 (MQ=255) aagTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAgctg < 5:181810/149‑1 (MQ=255) aagTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAgctg < 2:277726/149‑1 (MQ=255) agTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCGACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAgctg < 4:261377/148‑1 (MQ=255) cTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCCCAGCTCGGGCAAGctgctg > 7:199780/1‑148 (MQ=255) tACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGt > 3:332707/1‑148 (MQ=255) cATGGGGGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCGGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACt < 6:105704/149‑1 (MQ=255) aaaTCCCCCTGATGACTGAGAATGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCg > 3:49587/1‑148 (MQ=255) ccTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAgctgct < 3:178689/129‑1 (MQ=255) ccTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAgctgct > 4:178689/1‑129 (MQ=255) ccTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATcc < 4:185010/149‑1 (MQ=255) cTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATccc > 8:279884/1‑149 (MQ=255) tgatgaCTGAGAACGGTACCTTCGTTATCAACGGTACCGAGGGTGTGATGGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCcac < 6:30886/110‑1 (MQ=255) tgatgaCTGAGAACGGTACCATCGTTATCAACGGTACCGAGCGTGAGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCcac > 5:30886/1‑110 (MQ=255) gaCTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGAATCATCCCTTAcc > 5:203398/1‑149 (MQ=255) aCTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTAcc < 7:86609/148‑1 (MQ=255) agaATGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCgg < 4:49587/148‑1 (MQ=255) agaACGGTACGTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCgg < 2:271667/148‑1 (MQ=255) tcGGTACCGTTGATAACGAAGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGtt < 6:252788/146‑1 (MQ=255) tcGGTACCGTTGATAACGAAGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGtt > 5:252788/2‑147 (MQ=255) tcGGTACCGTTGATAACGAAGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGt > 6:351844/2‑146 (MQ=255) tcGGTACCGTTGATAACGAAGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGt < 5:351844/145‑1 (MQ=255) cGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCct < 2:23428/149‑1 (MQ=255) cGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCct > 4:214819/1‑149 (MQ=255) ggTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCctg > 7:167353/1‑149 (MQ=255) aCCTTCGTTATCAACGGTACCGCGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCAGCCTCCCTGACCGCGGTTCctggct > 6:9165/1‑149 (MQ=255) aCCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCctggct > 6:6724/1‑149 (MQ=255) cTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCctggctg > 8:132237/1‑148 (MQ=255) cTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCctggctg > 1:341413/1‑148 (MQ=255) tCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTc < 6:352458/117‑1 (MQ=255) tCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTc > 5:352458/1‑117 (MQ=255) ttATCAACGGGACCGAGCCGGTGATCGTTTCCCAGCTGCACCGTGCGCCTGGTGTGGTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCCTGGCTGGACTTc < 8:175353/149‑1 (MQ=255) aTCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCCTGGCTGGACTTc > 2:337749/1‑147 (MQ=255) tCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCct < 7:212353/135‑1 (MQ=255) tCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCct > 8:212353/1‑135 (MQ=255) aaCGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACAGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCCTGGCTGGACTTCGAGtt > 6:140708/1‑149 (MQ=255) | TGACCTTCGCGGTCCCACTGCGGGTCAAGGTGCGCCTGATCATCTTCGACAAGGAATCGTCGAACAAAGCGATCAAGGACATCAAAGAGCAAGAAGTCTACATGGGTGAAATCCCCCTGATGACTGAGAACGGTACCTTCGTTATCAACGGTACCGAGCGTGTGATCGTTTCCCAGCTGCACCGTTCGCCTGGTGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCGGGCAAGCTGCTGTACTCCGCTCGCATCATCCCTTACCGCGGTTCCTGGCTGGACTTCGAGTT > NC_002947/537903‑538197 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |