| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 565,991 | T→A | 7.7% | intergenic (+31/‑133) | katA → / → bfr‑I | catalase/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 565,991 | 0 | T | A | 7.7% | 226.5 / 7.8 | 78 | intergenic (+31/‑133) | katA/bfr‑I | catalase/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base T (36/36); new base A (3/3); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01 | |||||||||||
CGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCA > NC_002947/565843‑566134 | cGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCAttt < 2:138686/149‑1 (MQ=255) ccATGGCGGGCGTCAGCGAGGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAAACTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCACATTTGGGCg > 2:92567/1‑149 (MQ=255) gcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGt‑tc < 7:249244/148‑2 (MQ=255) gcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGt‑tc < 5:130689/148‑2 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGt‑tttt < 4:112850/149‑1 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGt‑tttt < 3:126415/149‑1 (MQ=255) gggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAAAACCGCCCAAATGAGGGCGGt‑tcttc < 2:69718/149‑1 (MQ=255) gggcgTCAGCGAAGATGGCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGCGATTGCAAAGTCTTTGGGCATCATTCTCGCCTAAGTCGAAGTCATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTc < 7:307124/149‑1 (MQ=255) cgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAAt < 7:153074/149‑1 (MQ=255) cgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAAt < 5:2900/149‑1 (MQ=255) aGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGaa < 6:156622/148‑1 (MQ=255) gCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAata > 5:33138/1‑149 (MQ=255) cGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAatat < 4:217359/149‑1 (MQ=255) cGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAata > 3:210043/1‑148 (MQ=255) gATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAATGGCTTTGGGCATCAATCTCGCCTAAGTCTAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCac < 1:92567/148‑1 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGtt > 2:60838/1‑149 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGtt > 5:179433/1‑149 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGtt < 8:133548/149‑1 (MQ=255) ttCAGCGTCAGCTACAGTACTTCTTCAAGGCGGAACCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGtt > 5:211377/1‑148 (MQ=255) aGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAAc < 8:205722/149‑1 (MQ=255) gCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGAtttt > 2:231944/1‑149 (MQ=255) gCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATAACTACTGTGTAACCGAtttt > 8:335438/1‑149 (MQ=255) cAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGc > 3:244354/1‑149 (MQ=255) cAGTACTTCTTCAAGGCGGAACCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGAtttttt < 6:211377/147‑1 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCAGTACTGTTTAACGGATTTTTTGAGTc > 6:301977/1‑149 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTc > 2:359701/1‑149 (MQ=255) cttcttCAAGGCTGATCCGTCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTTATAAGAAGAACCGCACTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCt < 7:335438/148‑1 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCTATTTTTTGAGTCt > 8:83231/1‑148 (MQ=255) cttcttCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCt > 6:193360/1‑148 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa > 1:264351/1‑149 (MQ=255) cttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt > 2:23041/1‑149 (MQ=255) cttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt > 7:267523/1‑149 (MQ=255) cAAGGCGGATGCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATGAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgc < 5:206723/148‑1 (MQ=255) aaGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgcgc > 3:155246/1‑149 (MQ=255) aGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTCTTTAACCGATTTTTTGCGTCTGATTGcgcg > 4:122754/1‑149 (MQ=255) cGGATCCGGCTTACTGCGAAGGGATTGCAAAGGCTTTGGGGATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCACTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttt < 6:112406/149‑1 (MQ=255) gATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAATAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACAGATTTTTTGCGTCTGATTGCGCGtttt > 7:195552/1‑148 (MQ=255) cGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAg < 1:231944/148‑1 (MQ=255) ggCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt > 1:130954/1‑148 (MQ=255) cTTACGGAGAATGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGAc < 5:301977/149‑1 (MQ=255) ttACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGAc > 6:93317/1‑148 (MQ=255) aCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCa > 4:184440/1‑148 (MQ=255) aCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCa > 5:96516/1‑148 (MQ=255) cGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATa < 4:210043/149‑1 (MQ=255) gCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 5:193360/149‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 1:359701/149‑1 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCt < 5:93317/149‑1 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCt > 3:223773/1‑149 (MQ=255) cAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaa < 8:163719/140‑1 (MQ=255) cAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaa > 7:163719/1‑140 (MQ=255) ggCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca < 4:155246/149‑1 (MQ=255) ggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtgtg < 6:33138/149‑1 (MQ=255) tCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa > 1:346704/1‑148 (MQ=255) tCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCAt < 2:264351/149‑1 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTTGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa < 6:27202/149‑1 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa > 5:367752/1‑149 (MQ=255) aTCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa > 8:48834/1‑149 (MQ=255) tcGCCTAAGTCGAAGTGATAAGAAGAACCGCCGTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGt > 2:24623/1‑149 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACg < 2:130954/146‑1 (MQ=255) cTAAGTCGAAGTGATAAGAAGAACCGCCGTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTc < 6:367752/149‑1 (MQ=255) aGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTcac < 6:198519/148‑1 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAATAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATg > 5:336588/1‑147 (MQ=255) aaGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATg > 6:172143/1‑146 (MQ=255) gATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAAt < 3:184440/148‑1 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTATTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAAt > 1:215575/1‑148 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAg < 4:244354/149‑1 (MQ=255) ttgaaaaaCCGCCCAAATGAGGGCGGT‑TCTTCAATGAATATCACTTCTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg > 5:58760/3‑149 (MQ=255) agaagaACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg < 2:346704/149‑1 (MQ=255) agaagaACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg < 6:179433/149‑1 (MQ=255) agaagaACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg < 4:223773/148‑1 (MQ=255) gaagaaCCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGc > 5:182839/1‑149 (MQ=255) gaagaaCCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGc > 4:176287/1‑149 (MQ=255) aaCCGCCCAAATGAGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGAt > 7:132922/1‑148 (MQ=255) aCCGCCCAAATGAGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATg > 6:110153/1‑148 (MQ=255) cGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa < 7:83231/149‑1 (MQ=255) gCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 3:176287/149‑1 (MQ=255) gCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 1:23041/149‑1 (MQ=255) gCCCTCATTTGGGCGGT‑TTTTCAATGAAAATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg > 1:210781/1‑149 (MQ=255) tCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATCGAGAATCAGGGCGATGCAAGGcaa > 2:274342/1‑147 (MQ=255) | CGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGT‑TTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCA > NC_002947/565843‑566134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |