| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 707,561 | T→C | 6.9% | intergenic (‑213/‑38) | rpsT ← / → murJ | 30S ribosomal protein S20/lipid II flippase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 707,561 | 0 | T | C | 6.9% | 212.0 / 4.9 | 74 | intergenic (‑213/‑38) | rpsT/murJ | 30S ribosomal protein S20/lipid II flippase |
| Reads supporting (aligned to +/- strand): ref base T (35/33); new base C (2/3); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
TCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGC > NC_002947/707415‑707708 | tCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCt < 1:201125/149‑1 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTcc < 8:44979/148‑1 (MQ=255) aaGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCctct < 1:130543/149‑1 (MQ=255) aaGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGCCAGACAGCGTccgaa < 4:219090/149‑4 (MQ=255) aGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTTCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGTGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTg < 2:78500/149‑1 (MQ=255) ggCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGt > 3:313536/1‑149 (MQ=255) ggCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGt > 5:228228/1‑149 (MQ=255) ggCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGCCAGACAGCGTccgaatg < 3:307840/149‑6 (MQ=255) cACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCAt > 4:367358/1‑149 (MQ=255) cTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTgg > 5:295439/1‑149 (MQ=255) cTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGACTGGCAGCGTCCTCTGTCATTgg > 3:308674/1‑149 (MQ=255) tGCAAGGTTACGCCGAGCGGTGCGCCAACAAGCGGGAAATATTACTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATAGCACATTAGGACGCTGTCTGGCAGCGTCCACTGTAATTTGc > 8:69597/1‑149 (MQ=255) cAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCTGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt < 6:339179/149‑1 (MQ=255) aaGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt > 6:154865/1‑148 (MQ=255) aGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTc > 1:332131/1‑139 (MQ=255) ccgccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCtt > 8:244706/1‑149 (MQ=255) ccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTc < 3:67788/149‑1 (MQ=255) ccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGCACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTc < 1:70655/149‑1 (MQ=255) cgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTAATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTc < 1:286082/149‑1 (MQ=255) aGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGAt < 1:104215/149‑1 (MQ=255) ggTGCGACAAGAAGCGCGTAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCTTGAATCTTTTCGATGaa < 6:228228/149‑1 (MQ=255) gcgcCAACAAGCGGGAAAGATTCCTTTCTGCTGAGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGAGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTAATTGGCGTGAATCTTTTCGATGAACCt > 5:253945/1‑149 (MQ=255) ccAACAAGCGGGAAAGATTCCTTTCTGCTGAGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGACCTCTGTCATGGGAGTGATACTTTTCGATCAACCTGc > 5:279354/1‑148 (MQ=255) caacaaGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCt > 1:113602/1‑148 (MQ=255) caacaaGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCt < 2:113602/148‑1 (MQ=255) caacaaGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTc < 5:108706/149‑1 (MQ=255) acaaGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCa > 3:222245/1‑148 (MQ=255) caaGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCaaa < 4:313536/149‑1 (MQ=255) aGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAGCCTGCTCAAATc > 4:182336/1‑149 (MQ=255) gCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTATGGCAGCGTCCTCTGTCATTGGCGTGAATCTGTTCGATGAACCTGCTCAAATcc > 5:26025/1‑149 (MQ=255) gCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGATGTGAGGCAGCGTCCTGTGTCATTGGCGTGAATTTTTTCGATGAACCTGCTCTAATcc > 8:247317/1‑149 (MQ=255) gggAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt < 7:69597/149‑1 (MQ=255) gAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt < 3:317112/147‑1 (MQ=255) gAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt > 4:317112/1‑147 (MQ=255) gAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTgg > 5:280578/1‑149 (MQ=255) tCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAg > 5:278843/1‑148 (MQ=255) cTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGc > 1:332573/1‑141 (MQ=255) cTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGc < 2:332573/141‑1 (MQ=255) cTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAga > 2:318225/1‑146 (MQ=255) cTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGt > 3:357642/1‑147 (MQ=255) cTTTCTGATGCTCGACATTTACACTCGGGAATTTTTGGCTCCACTGCGAAGGCGCTGGAGT‑ATCGCAAATTCGGACTCTGTCTGGCAGCGTAATCTGTCATTGGCTTGAATCTTTTCTATTAACCTTCTCAAATCCCTGTCTTCa < 1:318225/145‑1 (MQ=255) tttCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAg > 5:119289/1‑149 (MQ=255) gctgcGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGa > 1:221805/1‑149 (MQ=255) ctgcGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTc < 6:295439/146‑1 (MQ=255) tgcGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGAt > 6:191280/1‑148 (MQ=255) gcgcGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCa > 6:74202/1‑149 (MQ=255) gcgACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCAcc < 6:278843/149‑1 (MQ=255) gACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCAt < 3:367358/149‑1 (MQ=255) gACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCAt < 1:233234/149‑1 (MQ=255) tGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGAtt > 2:361193/1‑149 (MQ=255) tACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGATCCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTc < 3:182336/149‑1 (MQ=255) acTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTcgcg > 8:290162/1‑149 (MQ=255) cTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCgg < 7:3079/149‑1 (MQ=255) ggAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGc > 4:178065/1‑149 (MQ=255) aaTTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTg > 2:317636/1‑149 (MQ=255) tttttGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTggg > 3:26330/1‑149 (MQ=255) cccTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTcg < 5:191280/148‑1 (MQ=255) cTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGa > 1:8986/1‑149 (MQ=255) cGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGacac < 5:154865/149‑1 (MQ=255) cgGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTc > 2:336336/1‑134 (MQ=255) cgGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTc < 1:336336/134‑1 (MQ=255) cacaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCttt < 6:119289/149‑1 (MQ=255) cacaTTCGGACGCTGCCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCAt < 7:290479/145‑1 (MQ=255) cacaTTCGGACGCTGCCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCAt > 8:290479/1‑145 (MQ=255) cacaTTCGGACGCGGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCttt < 5:74202/149‑1 (MQ=255) acaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTg < 7:290162/149‑1 (MQ=255) aTTCGGACTCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCGCTATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGt < 6:26025/149‑1 (MQ=255) aTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGt > 3:84172/1‑149 (MQ=255) ggACGCTGTCTGGCAGCTTCCTCTGTCATTGGCTTGAATCTTTTCGATGAACCTGCTCAACTTCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGTGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg < 6:279354/149‑1 (MQ=255) ggACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg < 2:221805/149‑1 (MQ=255) ggACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg > 4:154236/1‑149 (MQ=255) ggACGCTGCCAGACAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg > 5:184045/1‑149 (MQ=255) tGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTg < 4:205058/137‑1 (MQ=255) tGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTg > 3:205058/1‑137 (MQ=255) tCTGGCAGCGTCCTCTGTCATTGTCGTGAATCTTTTAGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTTCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGTTGCTGGTGTCg < 6:253945/147‑1 (MQ=255) tCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGc < 4:26330/148‑1 (MQ=255) | TCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGACCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGT‑ATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGC > NC_002947/707415‑707708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |