| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 838,715 | A→C | 7.1% | intergenic (‑18/+41) | rplY ← / ← prs | 50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 838,715 | 0 | A | C | 7.1% | 222.9 / 7.4 | 81 | intergenic (‑18/+41) | rplY/prs | 50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase |
| Reads supporting (aligned to +/- strand): ref base A (38/37); new base C (2/4); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.79e-01 | |||||||||||
CGCAGGCGGCGGCTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCTTGAGC > NC_002947/838570‑838860 | cGCAGGCGGCGGCTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAg < 6:112893/149‑1 (MQ=255)cGCAGGCGGCGGCTCGCACCTTTCCCCACGTCAGTACGCGCTTGGGCGTTCAGAGTTAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAg < 4:248857/149‑1 (MQ=255) aGGCGGCGGCTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGtt > 8:101657/1‑149 (MQ=255) ggctgcggcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTg < 7:101657/149‑1 (MQ=255) ggcggcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTgggg > 7:86981/1‑149 (MQ=255) gcggcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAANAAAGCCCCGCCCCAACCTGTGTTggggc < 1:211012/149‑1 (MQ=255) ggcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACCTGTGTTggggcgg < 7:320395/149‑1 (MQ=255) gcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATTCATTTTTAACAAAATTACCCCCCCCAGGGCTTTTACGACCACCGCAAACGGGTATGGAAAAAAACCCCCCCCCCAACAAAGGTTggggcgg > 1:105960/1‑149 (MQ=255) gcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACCTGTGTTggggcggg < 5:341565/149‑1 (MQ=255) gcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACCTGTGTTggggcggg < 8:146925/149‑1 (MQ=255) gcTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTggggcggg < 3:189602/149‑1 (MQ=255) tCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTggggcggggc > 4:76572/1‑149 (MQ=255) tCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTggggcggggc > 2:65859/1‑149 (MQ=255) tCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAAACCAGGTTggggcggggc > 4:318890/1‑149 (MQ=255) gCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGgcgc > 6:210019/1‑149 (MQ=255) aCCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCt > 7:184785/1‑148 (MQ=255) aCCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTGGGGGCGGGGCGCtt < 7:35847/149‑1 (MQ=255) tttCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTca > 3:173124/1‑148 (MQ=255) tttCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTca > 3:178848/1‑148 (MQ=255) tCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTcac < 7:290828/147‑1 (MQ=255) cccAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTggggcggg < 3:62071/136‑1 (MQ=255) cccAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTAggggcggg > 4:62071/1‑136 (MQ=255) cAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTg < 5:203759/122‑1 (MQ=255) cAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTg > 6:203759/1‑122 (MQ=255) gTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTc < 2:20719/149‑1 (MQ=255) cgcgCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTccc < 6:235570/148‑1 (MQ=255) gcgcTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTccc < 7:237803/147‑1 (MQ=255) gcgcTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTccc > 8:237803/1‑147 (MQ=255) cGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGaa < 4:355080/149‑1 (MQ=255) cGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGaa < 3:205696/149‑1 (MQ=255) gTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAAc < 3:76572/149‑1 (MQ=255) tCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACAt > 1:258335/1‑149 (MQ=255) gagTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCCACACAGGTGGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGACCATcgc > 6:283596/1‑149 (MQ=255) gagTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATcgc > 5:343612/1‑149 (MQ=255) agTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATcgcg > 6:54165/1‑149 (MQ=255) atacAGGCATT‑TTGTTCCTCCAAAGTACCCCCCCCAGGGCGTTTGCCACCAGCGCCAACGGGCATGGCAAAAACCCCCCGCCCAAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGa < 1:65859/145‑1 (MQ=255) aTTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGAt < 2:105960/149‑1 (MQ=255) ttCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATc > 8:248973/1‑149 (MQ=255) tt‑ttGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGCCCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAGCACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGATCATCGCGCTGCTCGAttcttc > 6:24072/1‑149 (MQ=255) tt‑ttGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGAttcttc > 5:191427/1‑149 (MQ=255) tGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGt < 8:184785/148‑1 (MQ=255) tctcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCt < 8:86981/148‑1 (MQ=255) tctcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCt > 2:342419/1‑148 (MQ=255) tcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGaa < 4:102535/119‑1 (MQ=255) tcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGaa > 3:102535/1‑119 (MQ=255) tcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGACCATCGCGCTGATCGATTCTTCGTTGCTGAt > 5:218694/1‑149 (MQ=255) tcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGAttcttc > 8:147588/1‑140 (MQ=255) tcCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGAttcttc < 7:147588/140‑1 (MQ=255) ccAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATg > 8:134680/1‑149 (MQ=255) ccAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATg > 8:273197/1‑149 (MQ=255) cAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATgc > 8:22941/1‑149 (MQ=255) cAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATgc > 3:335782/1‑149 (MQ=255) aGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATgcggc < 6:343612/149‑1 (MQ=255) gCCCCCCGAGGGCGTTTGCGACCAGCGCCAACTGGGATGGCAAAAAAGCCCCGACCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACAAGAGTCCCGCTTAGCGCAACATCGCGCTGATAGATTATTCGTTGCTGATGCGGCGTAc > 5:289876/1‑149 (MQ=255) ccccccGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATgcggc > 6:319784/1‑144 (MQ=255) ccccccGAGGGCGTTTGCGACCAGCGCCAACGGGGAAGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATgcggc < 5:319784/144‑1 (MQ=255) ccccGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGc < 4:129068/149‑1 (MQ=255) cccGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCt < 4:335782/149‑1 (MQ=255) cGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTc < 5:210019/149‑1 (MQ=255) cGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTc < 3:59737/149‑1 (MQ=255) gAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAACGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCa < 3:318890/149‑1 (MQ=255) gAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCa < 7:134680/149‑1 (MQ=255) gTTTGCGACCAGCGCGAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACa > 7:217398/1‑149 (MQ=255) gACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGt < 1:342419/149‑1 (MQ=255) ccAGCGCCACCGGGGATGGCAAAAACGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CACCACGTGTCCCGCTTAGCGGAACATCGCGCTGAGCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGc < 5:283596/149‑1 (MQ=255) cgcCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGata < 7:248973/149‑1 (MQ=255) ggATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTgg > 4:9520/1‑149 (MQ=255) gATGGCATAATAGCCCCGCCCCAACACAGGTTGGGGCTGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGATGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGc < 6:218694/149‑1 (MQ=255) aaaaaaGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATAc > 7:51521/1‑149 (MQ=255) aaaaaaGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATAc > 7:269924/1‑149 (MQ=255) aaaaaaGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGAGCTGATAGATTCTTCGTTGCTGATGCGGCGTACAGCTTCAGCGAAAACAGGTGCTATTTCACGCTGGCGGAGAc > 8:92921/1‑149 (MQ=255) aaGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTc < 2:258335/149‑1 (MQ=255) aGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTca < 7:273197/149‑1 (MQ=255) cccgccccAACCTGTGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAg > 5:279388/1‑149 (MQ=255) cccgccccAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGt < 2:19088/144‑1 (MQ=255) cccgccccAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGt > 1:19088/1‑144 (MQ=255) ccgccccAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAgg > 6:302883/1‑149 (MQ=255) cccAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCtt > 8:275579/1‑148 (MQ=255) cAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCTTGag < 7:22941/149‑1 (MQ=255) aaCACAGGTTGGGGCGGGGCGCTTCACATGCAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCTTGag > 1:27660/1‑149 (MQ=255) aaCACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCTTGagc < 5:54165/149‑1 (MQ=255) | CGCAGGCGGCGGCTCGCACCTTTCCCCAGGTCAGTACGCGCTTGGGCGTTCAGAGTGAATTCAGTCATT‑TTGTTTCTCCAAAGTAGCCCCCCGAGGGCGTTTGCGACCAGCGCCAACGGGGATGGCAAAAAAGCCCCGCCCCAACACAGGTTGGGGCGGGGCGCTTCACAT‑CAACACGTGTCCCGCTTAGCGGAACATCGCGCTGATCGATTCTTCGTTGCTGATGCGGCGTACCGCTTCAGCGACAACCGGTGCGATATCCAGCTGGCGGATACGGTCACAGGCTTGAGC > NC_002947/838570‑838860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |