Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 997,755 | C→T | 5.2% | intergenic (‑160/+72) | PP_0860 ← / ← PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 997,755 | 0 | C | T | 5.2% | 235.3 / 2.3 | 76 | intergenic (‑160/+72) | PP_0860/PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor |
Reads supporting (aligned to +/- strand): ref base C (32/40); new base T (2/2); total (34/42) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01 |
CCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTAGAGAAGGCCTTG > NC_002947/997607‑997902 | ccTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAAc > 4:78901/1‑149 (MQ=255) cTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACg > 1:93905/1‑149 (MQ=255) gAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCa < 2:93905/148‑1 (MQ=255) gTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAg > 1:249660/1‑147 (MQ=255) ttGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGa < 4:365067/148‑1 (MQ=255) gcCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCt > 4:316303/1‑149 (MQ=38) cgcgACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTc < 6:299222/149‑1 (MQ=255) gcgACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCttta < 3:316303/149‑3 (MQ=37) aCCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCGCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGcc < 7:235185/149‑1 (MQ=255) ccGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCcgc < 2:249660/149‑1 (MQ=255) gcggcgTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGaaa < 5:218808/149‑1 (MQ=255) cgTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGc > 6:168584/1‑149 (MQ=255) tGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCg < 4:270940/149‑1 (MQ=255) cATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGc > 4:24068/1‑149 (MQ=255) aTTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGca > 8:261971/1‑149 (MQ=255) tGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAga < 6:108314/149‑2 (MQ=255) tGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAg < 3:24068/148‑1 (MQ=255) ccTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgca > 3:40326/1‑148 (MQ=255) cTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgcg > 2:86780/1‑148 (MQ=255) cTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgcg > 6:265039/1‑148 (MQ=255) gATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCGGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAg < 7:94111/148‑1 (MQ=255) tACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGccc < 7:116890/149‑1 (MQ=255) acacAAAAGCCCCGCTCACGGCAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCt < 3:312862/149‑1 (MQ=255) acaAAAGCCCCGCTCTGGGGTATGATCGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCGTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTc < 6:312214/149‑1 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCa < 3:126556/116‑1 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCa > 4:126556/1‑116 (MQ=255) aaGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgcg < 1:233961/136‑1 (MQ=255) aaGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgcg > 2:233961/1‑136 (MQ=255) gCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGa < 3:78901/149‑1 (MQ=255) gCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCACAGCCCTTCAACAGa < 4:40326/149‑1 (MQ=255) cccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATc < 7:159236/149‑1 (MQ=255) ccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATc > 3:174228/1‑148 (MQ=255) cGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCCCCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaa < 5:265039/149‑1 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCACCGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaa > 8:161446/1‑149 (MQ=255) gggAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACCGGCGCAGCCCTTCAACAGATcaacccaacc > 7:163611/1‑149 (MQ=255) gggAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaacc > 4:362437/1‑149 (MQ=255) ggAATGAAGGGGGCCGGGAGGGCTGCTTTTTGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCTACGCAGTAGCTGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCaacccaaccc < 2:88053/149‑1 (MQ=255) tGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGa > 5:245845/1‑148 (MQ=255) gggAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGACGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTg > 3:91984/1‑148 (MQ=255) aGGGCTGCTTTCCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCGAACCCTGACCTCAGAAGTGCACg > 8:238617/1‑149 (MQ=255) gctTTTCGTGTTGGCTGTGCGGGCCTCTGCCCGGCTACAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggtg < 8:350258/149‑1 (MQ=255) ctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggtgg < 7:261971/149‑1 (MQ=255) ttCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTggtggt < 3:310469/147‑1 (MQ=255) gttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGt > 8:236606/1‑149 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGa > 8:2471/1‑55 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGa < 7:2471/55‑1 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTg > 2:201896/1‑149 (MQ=255) gtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGcc > 1:82588/1‑149 (MQ=255) tgCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGt < 7:236606/146‑1 (MQ=255) ctctTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgcc < 3:362437/149‑1 (MQ=255) tttCGCGGCTGAAGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccgc > 5:284676/2‑149 (MQ=25) cgcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGATATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccgcc < 1:86780/147‑1 (MQ=255) cgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGt < 2:359746/149‑1 (MQ=255) cgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGt < 5:168584/149‑1 (MQ=255) gCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTg < 2:82588/149‑1 (MQ=255) tAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGc > 1:226533/1‑149 (MQ=255) aaaGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCGGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGc > 2:347717/1‑148 (MQ=255) aaGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGc < 6:284676/147‑1 (MQ=37) gCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAg > 6:2117/1‑149 (MQ=255) ccGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGt < 5:141983/149‑1 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCaa < 7:106787/112‑1 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCaa > 8:106787/1‑112 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTg < 8:352063/136‑1 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTg > 7:352063/1‑136 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTgg < 6:245845/149‑1 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTgg < 5:2117/149‑1 (MQ=255) gCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGGTGGCGAAGTgg > 7:342842/1‑149 (MQ=255) ccTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTggg > 5:106960/1‑147 (MQ=255) tGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGCGTa > 6:12176/1‑147 (MQ=255) gCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTa > 5:39436/1‑146 (MQ=255) ccGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTAGAGAAg < 8:163611/149‑1 (MQ=255) cGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtg > 5:292544/1‑94 (MQ=255) cGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtg < 6:292544/94‑1 (MQ=255) aaCGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTAGAGAAGGCCtt < 6:39436/149‑1 (MQ=255) aCGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTgg < 5:265011/126‑1 (MQ=255) aCGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTgg > 6:265011/1‑126 (MQ=255) aCGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTAGAGAAGGCCTTg < 4:91984/149‑1 (MQ=255) | CCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCGAAGTGGGTAGAGAAGGCCTTG > NC_002947/997607‑997902 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |