| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 162,282 | A→T | 8.9% | intergenic (‑316/+58) | PP_0153 ← / ← scpC | hypothetical protein/propionyl‑CoA:succinate CoA transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 162,282 | 0 | A | T | 8.9% | 230.1 / 6.5 | 82 | intergenic (‑316/+58) | PP_0153/scpC | hypothetical protein/propionyl‑CoA:succinate CoA transferase |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base T (4/4); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACTTATTTGGTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATGGCCGCCACGCTGG > NC_002947/162136‑162430 | aCTTATTTGGTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGc > 4:64381/1‑149 (MQ=255) tGGTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGa < 2:98009/148‑1 (MQ=255) ggTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCTTGCCCGCGaa < 3:60516/148‑1 (MQ=255) ggTGCGTTCTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGTTTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGaa < 1:297074/148‑1 (MQ=255) gTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGaa > 1:25637/1‑147 (MQ=255) tGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTCCGGCCTCTTCGCGGGCTTGCCCGCGaatgg < 7:340639/149‑4 (MQ=39) tGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCAGCGAagag > 5:365108/1‑149 (MQ=255) gTTTTGATTCGTAGAAGGGGATTTGTCAGTCTGTAAGGTCTTAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCTTAGTGATAGAAGTGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGcc < 4:293376/149‑1 (MQ=255) gTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGcc > 4:46961/1‑149 (MQ=255) gTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGcc < 8:64447/149‑1 (MQ=255) ttttGAATCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGGGGCGTAGTCATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCg < 5:259057/149‑1 (MQ=255) gATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATGGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGaa > 2:68924/1‑148 (MQ=255) aTTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGaa > 2:186662/1‑147 (MQ=255) ttCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTCCGGCCTCTTCGCGGGCTTGCCCGCGAATGGGccataa > 3:37021/1‑142 (MQ=37) ttCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTCCGGCCTCTTCGCGGGCTTGCCCGCGAATGGGCCATAACa < 4:37021/148‑1 (MQ=37) ttCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGGGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCTTGCCCGCGAATGGGCCATAACa < 7:76568/148‑1 (MQ=255) gaagaaGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAaga < 6:227287/135‑1 (MQ=255) gaagaaGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAaga > 5:227287/1‑135 (MQ=255) gaagaaGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCgg < 1:186662/149‑1 (MQ=255) gaagaaGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTACAGATAGAACGGTTAGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGCCCGGAACACCg > 7:296359/1‑148 (MQ=255) agaagGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGaa < 6:80344/149‑1 (MQ=255) aagGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAg > 8:239225/1‑148 (MQ=255) aagGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGc < 5:291173/149‑1 (MQ=255) ggggATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAg < 3:64381/149‑1 (MQ=255) gggATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACATTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAgg < 2:134195/149‑1 (MQ=255) gggATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAgg < 1:274889/149‑1 (MQ=255) gtgaGTCGGGAAGGTGTTTAAGAAGAAGAACAGTAGTACAGATTATGCTGGTAGTTGAGGGGTGGCGTTGTGATAGAAGTGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGgccgcc < 8:296359/145‑1 (MQ=255) gTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGccgccg > 4:1143/1‑149 (MQ=255) aGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATGGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGtt < 1:68924/148‑1 (MQ=255) aGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTc < 3:154254/149‑1 (MQ=255) gggAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTa > 1:281992/1‑149 (MQ=255) ggAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTAc > 3:295752/1‑149 (MQ=255) gAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTAc > 3:154049/1‑148 (MQ=255) tGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCcgc > 1:211106/1‑100 (MQ=255) tGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCcgc < 2:211106/100‑1 (MQ=255) gAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGAAGTGATAGCAGGGTTTGACTGATATGGCCCATTCGCGGCCAAGCCAGCCAAGAGGACGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACAACCg > 5:290826/1‑148 (MQ=255) aaaGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCgg < 7:239225/148‑1 (MQ=255) aaaGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCgg > 3:232051/1‑148 (MQ=255) aaaGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGa > 2:7333/1‑149 (MQ=255) aaGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGAt < 2:281992/149‑1 (MQ=255) acaGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCa < 4:232051/149‑1 (MQ=255) cAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGAAAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGAATGCGcc > 1:241787/1‑149 (MQ=255) tgctAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTttcttc > 7:37726/1‑149 (MQ=255) tgctAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTttcttc > 6:234394/1‑149 (MQ=255) agtagAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAgg > 8:218316/1‑149 (MQ=255) gtagAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGt > 6:235667/1‑149 (MQ=255) gagGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGtt < 6:272720/136‑1 (MQ=255) gagGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGtt > 5:272720/1‑136 (MQ=255) gagGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGttt < 4:13620/148‑1 (MQ=255) agGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATACGCCCGGTTTCTTCCAGGTTTTc > 4:256668/1‑149 (MQ=255) ggggTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTc < 6:365108/148‑1 (MQ=255) gggTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGt < 3:1143/149‑1 (MQ=255) gggTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGCTTTCTTCCAGGTTTTCGt > 6:104867/1‑149 (MQ=255) gTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGc < 1:7333/149‑1 (MQ=255) tGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATACGCCCGGTTTCTTCCAGGTTTTCGTGcc < 3:256668/149‑1 (MQ=255) gTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCt > 6:305424/1‑149 (MQ=255) gTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAg < 4:154049/149‑1 (MQ=255) aTAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAggg < 2:25637/148‑1 (MQ=255) aGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCtt > 8:54957/1‑149 (MQ=255) gAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTc < 8:37726/149‑1 (MQ=255) tccgcTGTTCCGGCCTCTTCGCGGGCTTGCCCGCGAATGGGCCATAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCGTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAgg > 7:285581/5‑149 (MQ=25) aCTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGttt > 7:218314/1‑119 (MQ=255) aCTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGttt < 8:218314/119‑1 (MQ=255) aCTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGAtg > 6:337032/1‑149 (MQ=255) cTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTg < 6:16100/123‑1 (MQ=255) cTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTg > 5:16100/1‑123 (MQ=255) tGGCCCATTCGCGGGCAAGCCCTCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCTTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCggg < 7:154808/148‑1 (MQ=255) tGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCggg < 5:235667/148‑1 (MQ=255) tGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCggg < 5:234394/148‑1 (MQ=255) gcctcttCGCGGGCTTGCCCGCGAATAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTa > 4:167349/6‑149 (MQ=255) gcctcttCGCGGGCTTGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAACATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTa > 4:65497/6‑149 (MQ=255) gCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGt < 7:218316/148‑1 (MQ=255) ccATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGAt > 5:56789/1‑137 (MQ=255) ccATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGAt < 6:56789/137‑1 (MQ=255) ccATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATg > 2:289361/1‑149 (MQ=255) ccATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATg > 7:83213/1‑149 (MQ=255) gggCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCa > 7:300321/1‑108 (MQ=255) gggCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCa < 8:300321/108‑1 (MQ=255) ggCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTc < 5:164171/119‑1 (MQ=255) ggCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTc > 6:164171/1‑119 (MQ=255) gCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTcc > 1:351577/1‑92 (MQ=255) gCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTcc < 2:351577/92‑1 (MQ=255) aaGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATGGCCGCCACGCTg > 2:191733/1‑149 (MQ=255) aGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATGGCCGCCACGCTgg > 4:62566/1‑149 (MQ=255) | ACTTATTTGGTGCGTTTTGATTCGAAGAAGGGGATTTGTCAGTCGGGAAGGTCTGAAAGAACCAGCACAGTAGTACAGATTATGCTGCTAGTAGAGGGGTGGCGTAGTGATAGAAGGGTTTGACTGTTATGGCCCATTCGCGGGCAAGCCCGCGAAGAGGCCGGAACAGCGGAAGCAGGGCCGCCGTTCCGTACCACATCCGGATCAGCTGGCCAGCATGCGCCCGGTTTCTTCCAGGTTTTCGTGCCAGCTCAGGGCTTCGCGCAGGATGTGCGGGGTATGGCCGCCACGCTGG > NC_002947/162136‑162430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |