| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,038,225 | G→C | 8.6% | G390G (GGC→GGG) | PP_0897 ← | class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,038,225 | 0 | G | C | 8.6% | 206.9 / 7.4 | 68 | G390G (GGC→GGG) | PP_0897 | class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base G (30/32); new base C (4/2); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATC > NC_002947/1038080‑1038372 | cAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCg > 4:10891/1‑149 (MQ=255) aaCGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCgg > 3:147126/1‑149 (MQ=255) tCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTAGGCCCAGCCGGcccg > 7:345298/1‑148 (MQ=255) aGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TAc < 3:10891/149‑1 (MQ=255) gTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTAGGCCCAGCCGGCCC‑‑GACCa < 8:345298/149‑1 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACtt > 1:120666/1‑149 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATAAGGGTAGCAGTTGTCGGGCCGGCTGGGCC‑‑TAACACt > 6:91758/1‑148 (MQ=255) gtCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTcacccacc < 3:185704/148‑1 (MQ=255) gtCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATATGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCg > 2:283383/1‑149 (MQ=255) gCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCgg > 6:205932/1‑149 (MQ=255) gCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCgg > 2:368604/1‑149 (MQ=255) ccTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCggg > 1:90764/1‑149 (MQ=255) aTGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGAc < 7:300336/149‑1 (MQ=255) aTGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGAc < 5:361445/149‑1 (MQ=255) tGGCGGTCGGGCCACTCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGTCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGAc < 8:331768/148‑1 (MQ=255) tGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACg < 1:368604/149‑1 (MQ=255) cGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtag < 4:173509/149‑1 (MQ=255) ggTCGGGCCACGCTCGGACTTGCCAATCTTGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtag > 1:207705/1‑148 (MQ=255) cACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAg < 2:131443/149‑1 (MQ=255) cACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAg > 4:99757/1‑149 (MQ=255) gCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCgg > 1:148387/1‑149 (MQ=255) gACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCttt > 8:151888/1‑149 (MQ=255) gACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCttt > 6:273731/1‑149 (MQ=255) ttGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg > 6:133015/1‑149 (MQ=255) ccAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTc > 4:314657/1‑149 (MQ=255) ccAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTc > 2:314421/1‑149 (MQ=255) aaTCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGtagtag < 1:29821/127‑1 (MQ=255) aaTCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGtagtag > 2:29821/1‑127 (MQ=255) aTCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTAc < 1:283383/149‑1 (MQ=255) aTGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCg < 3:314657/148‑1 (MQ=255) ccAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAAc > 8:231774/1‑149 (MQ=255) cagcagGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAAc > 5:8970/1‑148 (MQ=255) agcagGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAActc < 7:151888/149‑1 (MQ=255) agcagGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAActc < 5:273731/149‑1 (MQ=255) agGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 2:120666/149‑1 (MQ=255) agGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 3:99757/149‑1 (MQ=255) ggCCAGTCTGCTCAAGGAGCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCg < 6:251291/149‑1 (MQ=255) gCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGc > 4:183064/1‑119 (MQ=255) gCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGc < 3:183064/119‑1 (MQ=255) tCTGCTCAAGGATCTGGCGAGTGAACTTGTCGATACGGGTAGCAGTTTTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCTGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACgg < 2:90764/149‑1 (MQ=255) tCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACgg < 3:78594/149‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc > 7:3711/1‑138 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 8:3711/138‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt < 5:91758/147‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGa < 4:356072/149‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGa < 3:126511/149‑1 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCGATACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt > 1:290109/1‑148 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAg > 5:338952/1‑149 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAg > 1:20502/1‑149 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAg > 4:170094/1‑149 (MQ=255) cTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCa < 1:314421/148‑1 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCgg > 5:216364/1‑100 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCgg < 6:216364/100‑1 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTc < 6:282949/106‑1 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCaa < 5:205932/146‑1 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCa > 6:354366/1‑149 (MQ=255) gAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCttt < 2:114493/103‑1 (MQ=255) gAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCAGGCCGACGTAGTAGATGAAGCGGCCttt > 1:114493/1‑103 (MQ=255) tGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATgcgc > 8:57842/1‑149 (MQ=255) aCTTGTCCATACGGGTAGCAGTGGGCGGGCCGGCGGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTtg < 5:302890/149‑1 (MQ=255) cGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATc < 6:338952/149‑1 (MQ=255) acgaaGTGGTAGGCCCAGCCGGCCC‑‑GACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTgcgc > 6:99245/5‑139 (MQ=255) acgaaGTGGTAGGCCCAGCCGGCCC‑‑GACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTgcgc < 5:99245/135‑1 (MQ=255) acgaaGTGGTAGGCCCAGCCGGCCC‑‑GACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACAATGCGATTGTGCTCGGCGTCACgg > 6:256416/5‑149 (MQ=255) acgaaGTGGTAGGCCCAGCCGGCCC‑‑GACACCTTAGTCACCCACAGGGTCGACCGGGCCGACGTAGTAGATGTCGCGGGCTTTCAGGTCTACCGGGCAATCTTCGCAACGGTTGAGAATTTCACAAATACGAATGTGCGAGTCATCACg > 6:256418/5‑148 (MQ=255) cAGTGGTCGGGCCGGCTGGGCC‑‑TACCCATTCGTAACACACCGTGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg > 7:37928/1‑149 (MQ=255) cAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg < 2:20502/149‑1 (MQ=255) tGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTc < 4:147126/149‑1 (MQ=255) ggCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATc < 3:170094/149‑1 (MQ=255) | CAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCC‑‑TACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATC > NC_002947/1038080‑1038372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |