| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,039,270 | G→C | 5.9% | P42R (CCT→CGT) | PP_0897 ← | class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,039,270 | 0 | G | C | 5.9% | 277.0 / 6.6 | 85 | P42R (CCT→CGT) | PP_0897 | class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base G (38/42); new base C (2/3); total (40/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.80e-01 | |||||||||||
ACGCTCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACG > NC_002947/1039123‑1039417 | aCGCTCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAgg < 8:59667/149‑1 (MQ=255) gCTCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGc > 1:334774/1‑148 (MQ=255) cTCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGa < 4:53854/149‑1 (MQ=255) tCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGAt > 7:156466/1‑149 (MQ=255) tggtggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCCTGCTGCACGCGATTcc < 7:327881/149‑1 (MQ=255) ggtggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGGACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑t > 6:14851/1‑149 (MQ=255) ggtggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑t > 1:320116/1‑149 (MQ=255) gtggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑Tc < 3:311473/149‑1 (MQ=255) tggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCa < 6:22425/149‑1 (MQ=255) tggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCa > 2:353861/1‑149 (MQ=255) tggCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCa < 5:364689/149‑1 (MQ=255) cgcCATCCCAGCGCACGTCCATGCCGATGGGGATGAACTCGGGGTGGTTACGGGTGTGCTGGCAGATGGGACGATTGCAGGTGGCGCAGATGCTCGAGTTGATCTGGATCTGGGCGTTGGATTCGCGTGCAGCAGGCGATTCC‑TCAGGc < 4:288407/149‑1 (MQ=255) cATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACg > 3:321512/1‑145 (MQ=255) aTCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGAt < 2:320116/149‑1 (MQ=255) tCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATa < 3:136909/149‑1 (MQ=255) gTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCa < 4:68655/149‑1 (MQ=255) gTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCa > 4:359319/1‑149 (MQ=255) cATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATgg > 6:285617/1‑149 (MQ=255) tGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGcc < 1:353861/149‑1 (MQ=255) ccACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTg > 2:158174/1‑148 (MQ=255) cACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGa > 6:378751/1‑149 (MQ=255) cACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGa > 8:170848/1‑149 (MQ=255) ggATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGaaa < 2:52232/149‑1 (MQ=255) ggATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGaaa < 4:321512/149‑1 (MQ=255) acacGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGa > 4:84439/1‑138 (MQ=255) acacGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGa < 3:84439/138‑1 (MQ=255) acacGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGAt > 4:324279/1‑139 (MQ=255) acacGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGAt < 3:324279/139‑1 (MQ=255) acacGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACg < 2:334774/149‑1 (MQ=255) acaaGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACg > 4:8310/1‑149 (MQ=255) cGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACgggg < 4:69924/149‑1 (MQ=255) ggTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGggt > 8:310034/1‑149 (MQ=255) gTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCa > 1:92999/1‑109 (MQ=255) gTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCa < 2:92999/109‑1 (MQ=255) aCGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGgta < 5:14851/149‑1 (MQ=255) gATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGgtag > 6:1030/1‑148 (MQ=255) ccGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACga < 8:156466/149‑1 (MQ=255) ccGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACga < 7:310034/149‑1 (MQ=255) cGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTAc > 6:259743/1‑146 (MQ=255) ggTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACgaga < 3:8310/149‑1 (MQ=255) gtgtCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGAt < 5:378751/149‑1 (MQ=255) tgtCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATg < 6:56288/149‑1 (MQ=255) tCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGaa > 7:60582/1‑149 (MQ=255) cTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAAtt > 5:173317/1‑149 (MQ=255) gCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTg > 6:167260/1‑147 (MQ=255) aGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAgg < 1:158174/149‑1 (MQ=255) aTTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACg > 5:194438/1‑133 (MQ=255) aTTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACg < 6:194438/133‑1 (MQ=255) aTTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGc < 3:359319/149‑1 (MQ=255) ggACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTc > 8:210320/1‑149 (MQ=255) aCGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCgg > 6:110028/1‑149 (MQ=255) tGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGAc > 7:194716/1‑149 (MQ=255) cGGTGGCGCACATGCGCGAGTTGCTCAGGATCGGGGCGATGGACTCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGAGCAAATCGAAGGGGTGGTAGTCCGAGATGAATTGCAGGGCGTCTGCGACGctc > 6:365244/1‑149 (MQ=255) cGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGctc < 5:110028/149‑1 (MQ=255) gcACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCATGGCGTCGGCGACGCTCTGCAt > 4:34939/1‑147 (MQ=255) gcACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGctct < 8:34958/143‑1 (MQ=255) gcACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGctct > 7:34958/1‑143 (MQ=255) gcACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAAt > 2:141633/1‑147 (MQ=255) cacaTGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAg < 7:210320/149‑1 (MQ=255) aTGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGTGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGgtc < 5:259743/149‑1 (MQ=255) aTGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGgtag < 8:281507/105‑1 (MQ=255) aTGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGgtag > 7:281507/1‑105 (MQ=255) tGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGgtcg > 1:154434/1‑149 (MQ=255) cgcgAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGgtcgtc < 2:154434/149‑1 (MQ=255) gcgAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACgaga < 8:105255/108‑1 (MQ=255) gcgAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACgaga > 7:105255/1‑108 (MQ=255) aGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTcttgc < 5:167260/149‑1 (MQ=255) gTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTcttgct < 6:368623/149‑1 (MQ=255) tGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTcttgctt < 5:285617/148‑1 (MQ=255) aGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAg < 8:117799/131‑1 (MQ=255) aGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAg > 7:117799/1‑131 (MQ=255) aGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCa < 7:170848/148‑1 (MQ=255) aGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCAc > 3:84373/1‑149 (MQ=255) gATCTGGGCGATGGAATCGCGTGCAGCTGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACgg > 6:253471/1‑149 (MQ=255) tCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACgg > 1:113924/1‑147 (MQ=255) tCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACgg < 2:113924/147‑1 (MQ=255) tgctttGGAATCGCGTGCTGCAGTCGATTAC‑TCACTCAGATAGTCCTAGTGCATGTCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGCATTGCCGGGCGTCGGCGACGCTCTGAATCTGGGCGTCTTGCTTGATCACGGt < 5:365244/139‑1 (MQ=255) ggCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATg < 8:194716/148‑1 (MQ=255) gcgtgaggAATCGCCTGCTGCACGCGATTCCATCGCCCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTcttgctt > 7:52724/7‑136 (MQ=37) gcgtgaggAATCGCCTGCTGCACGCGATTCCATCGCCCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTcttgctt < 8:52724/130‑1 (MQ=37) cgtgaggAATCGCCTGCTGCACGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTg < 4:24897/111‑1 (MQ=39) gATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAgc < 1:141633/149‑1 (MQ=255) gaggAATCGCCTGCTGCACGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAgcg > 3:154475/3‑149 (MQ=255) ggAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAgcgcg > 7:66205/1‑149 (MQ=255) gAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAgcgcgc < 4:84373/149‑1 (MQ=255) tCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGgtcgtc > 7:149273/1‑119 (MQ=255) cagctgGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTaaa < 5:253471/149‑1 (MQ=255) agGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACg < 5:1030/149‑1 (MQ=255) | ACGCTCATGGTGGCGCCATCCCAGCGCACGTCCATGCCCACGCGGATGAACACGGTGACGATACCGGTGTCCTGGCAGATTGGACGATGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGGGCGATGGAATCGCGTGCAGCAGGCGATTCC‑TCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACG > NC_002947/1039123‑1039417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |