Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,229,483 G→T 7.2% G888V (GGG→GTG)  PP_1072 → leucine‑rich repeat‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,229,4830GT 7.2% 167.8 / 4.2 56G888V (GGG→GTG) PP_1072leucine‑rich repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (26/25);  new base T (2/2);  total (28/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.97e-01

CGGGGATGGGCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGC  >  NC_002947/1229337‑1229628
                                                                                                                                                  |                                                                                                                                                 
cGGGGATGGGCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAggg                                                                                                                                                  <  3:283664/148‑1 (MQ=255)
  gggATGGGCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCCCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTtg                                                                                                                                               >  2:127788/1‑149 (MQ=255)
        ggCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGa                                                                                                                                          <  8:93258/148‑1 (MQ=255)
        ggCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGa                                                                                                                                          <  6:354102/148‑1 (MQ=255)
        ggCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGa                                                                                                                                          <  5:200071/148‑1 (MQ=255)
            tATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTgg                                                                                                                                            >  4:165264/1‑142 (MQ=255)
            tATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTgg                                                                                                                                            <  3:165264/142‑1 (MQ=255)
            tATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGCGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGAGGGAGCAc                                                                                                                                      >  7:40928/1‑148 (MQ=255)
             aTCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACGAAGTGTTTCCGAAGATGACAGACGGGGAGCGACAAGCCTATCTTCTTGAACTCATGGATCGGCGCTGAGGGTTGTGGGAGCACTa                                                                                                                                    >  4:294230/1‑149 (MQ=255)
                  gTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTAcagcc                                                                                                                               <  6:331917/149‑1 (MQ=255)
                       ccTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTgg                                                                                                                                            <  6:247535/131‑1 (MQ=255)
                       ccTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTgg                                                                                                                                            >  5:247535/1‑131 (MQ=255)
                        cTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCAGTACAGCCAGCTGa                                                                                                                         >  8:327877/1‑149 (MQ=255)
                            agttgtcgaggcgagAGCAGTCGGCGTGCAATAGTGCTGTGTATTCACCAAGTGTTTCCGACGATGACAGACTGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACgg                                                                                                                      <  7:283253/142‑1 (MQ=255)
                            aGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACggg                                                                                                                     <  2:5828/149‑1 (MQ=255)
                                 gcgaggcgagAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGt                                                                                                                >  1:220860/1‑149 (MQ=255)
                                   gaggcgagAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTg                                                                                                              >  2:8100/1‑149 (MQ=255)
                                           agCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAg                                                                                                                                         <  2:239068/114‑1 (MQ=255)
                                           agCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAg                                                                                                                                         >  1:239068/1‑114 (MQ=255)
                                            gCAGTCGGCGTGCCATTGGGCGTGGTATTCAGCAAGTGTTTCCGCCGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCt                                                                                                      <  3:294230/148‑1 (MQ=255)
                                                           tAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTgcgc                                                                                      >  2:305278/1‑149 (MQ=255)
                                                               gCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGt                                                                                  <  6:20508/149‑1 (MQ=255)
                                                                cGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTg                                                                                 <  2:10156/149‑1 (MQ=255)
                                                                      tttCACCAAGTGTTTCCGACGATGACTGAGGGGTAGCTACATGCCTATCTGCTTGACCTCATGGAGCGGCTAGTAGGGTTGTGGGAGCACTACAGCGAGCTGACGGGGCAGTTGGCGCGCCTGCGTGAGAGCCTGCGCCTGTGGCGCa                                                                            <  8:40928/147‑1 (MQ=255)
                                                                        tCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg                                                                          <  2:220860/148‑1 (MQ=255)
                                                                         cACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGa                                                                        >  2:321909/1‑149 (MQ=255)
                                                                          aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCACTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAt                                                                       <  1:71128/149‑1 (MQ=255)
                                                                           ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCt                                                                                                      >  6:372448/1‑117 (MQ=255)
                                                                           ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCt                                                                                                      <  5:372448/117‑1 (MQ=255)
                                                                            cAAGTCGTTCCGCCGACGACAGACGGGCAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc                                                                     <  8:298284/149‑1 (MQ=255)
                                                                             aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGTGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              >  5:158829/1‑123 (MQ=255)
                                                                             aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGTGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              >  5:164325/1‑123 (MQ=255)
                                                                             aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGTGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              <  6:158829/123‑1 (MQ=255)
                                                                             aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGTGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              <  6:164325/123‑1 (MQ=255)
                                                                                tgtTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAg                                                                  >  2:69687/1‑148 (MQ=255)
                                                                                  tttCCGAAGAGGACAGCCGTGACGCTACAAGCCTATCTGCTTGACCTCATGGAGCGACGAGTAGAGTTGTGGTAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTaa                                                               <  8:344396/149‑1 (MQ=255)
                                                                                     ccGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc                                                                     >  5:195467/1‑140 (MQ=255)
                                                                                     ccGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc                                                                     <  6:195467/140‑1 (MQ=255)
                                                                                       gaggaTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCAc                                                          <  1:305278/146‑1 (MQ=255)
                                                                                            tGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGAc                                                     <  1:8100/149‑1 (MQ=255)
                                                                                              aCAGACGGGGACCTACAAGCCTATCTGCTTGACCTCATGGCGCGGCGAGTAGGGTTGTGGGACCACTACAGCCAGCTGACGGGGCAGTGGGCGCGCCGGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGc                                                   <  7:327877/149‑1 (MQ=255)
                                                                                                aGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACCGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTgcgc                                                                                      >  8:24196/1‑112 (MQ=255)
                                                                                                aGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCtt                                                 >  3:72295/1‑149 (MQ=255)
                                                                                                  aCGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACACACTGGACGCTTTa                                               >  5:131345/1‑149 (MQ=255)
                                                                                                           tACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGt                                      >  4:152186/1‑149 (MQ=255)
                                                                                                                   tATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGc                              >  6:310336/1‑149 (MQ=255)
                                                                                                                     tCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTa                            >  1:196913/1‑149 (MQ=255)
                                                                                                                       tGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACt                          >  6:178135/1‑149 (MQ=255)
                                                                                                                        gCTTGACCTGATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGGTACTg                         >  3:263281/1‑149 (MQ=255)
                                                                                                                        gCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              <  7:247099/80‑1 (MQ=255)
                                                                                                                        gCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCaga                                                                                              >  8:247099/1‑80 (MQ=255)
                                                                                                                          ttGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGcc                       >  7:177355/1‑149 (MQ=255)
                                                                                                                               cTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACACACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACg                  >  3:31780/1‑149 (MQ=255)
                                                                                                                                  aTGGTGCGGCGAGTAGGGTTGGGGGAGCACTTCTGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCGTGCGCCTGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACgg                 <  6:131345/147‑1 (MQ=255)
                                                                                                                                      aGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGc           >  7:326175/1‑149 (MQ=255)
                                                                                                                                         ggcgAGTTGGGTTGTGGGAGCACTACAGCCCGCTGAGGGGGCAGTTGGCGCGCCTGCGGCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTgg        <  4:31780/149‑1 (MQ=255)
                                                                                                                                         ggcgAGTAGGGTTGTGGGAGCACTACAGCCAGCTGAGGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCATTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTgg        <  6:351648/149‑1 (MQ=255)
                                                                                                                                                 gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc  >  2:45775/1‑147 (MQ=255)
                                                                                                                                                 gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc  >  3:56299/1‑147 (MQ=255)
                                                                                                                                                  ggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc  >  4:18093/1‑146 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CGGGGATGGGCGTATCGGGTATGCCTTGAGTGGGCGAGGCGAGAGCAGTCGGCGTGCCATAGGGCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGC  >  NC_002947/1229337‑1229628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑