Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 188,613 | T→C | 6.0% | L241P (CTG→CCG) | PP_0165 → | GGDEF domain‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 188,613 | 0 | T | C | 6.0% | 248.9 / 3.8 | 84 | L241P (CTG→CCG) | PP_0165 | GGDEF domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base T (42/36); new base C (2/3); total (45/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGA > NC_002947/188468‑188760 | cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAc > 8:185225/1‑149 (MQ=255) cAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCg > 1:331092/1‑149 (MQ=255) aGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCgg < 4:260737/149‑1 (MQ=255) ccTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGc > 6:139222/1‑149 (MQ=255) cTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCt < 2:219600/149‑1 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGt < 1:130267/148‑1 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTc < 7:162111/149‑1 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCAGACCGGGCTGTc > 4:69742/1‑148 (MQ=255) agagTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcct < 2:40395/149‑3 (MQ=255) agagTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcct < 6:316563/149‑3 (MQ=255) agagTTGCCACGCACGCCGGAGCTAAGCCGCGTAGTGCAAGCGATGAACCAGATGGTCCAGAAACTCAAAGACCTGTACACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCATACCAGGACAGCCTGACCTGGCTGTCg > 2:130260/1‑148 (MQ=255) ccACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAccgcc < 6:243507/148‑1 (MQ=255) cacgcacgCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACcgccgc > 7:305333/1‑149 (MQ=255) acgcacgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCgg > 6:121695/1‑132 (MQ=255) acgcacgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCgg < 5:121695/132‑1 (MQ=255) cgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTAtttt < 7:185225/149‑1 (MQ=255) cgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGGTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTAtttt < 4:5274/149‑1 (MQ=255) gcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTAtttt > 1:255785/1‑148 (MQ=255) gcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTAtttt > 4:358487/1‑148 (MQ=255) cGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGaa < 5:261952/149‑1 (MQ=255) gAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCCCTATTTTGAAAt > 7:213399/1‑149 (MQ=255) cTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATg > 3:243326/1‑147 (MQ=255) cTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCa < 3:235538/149‑1 (MQ=255) cTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCa < 3:69742/149‑1 (MQ=255) cgcgTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGaa < 3:207276/149‑1 (MQ=255) tGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCgg < 5:139222/149‑1 (MQ=255) tGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcctg > 2:320519/1‑112 (MQ=255) tGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGCACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCgg < 3:104094/149‑1 (MQ=255) cAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCggg > 7:136162/1‑148 (MQ=255) cAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCggg > 1:365368/1‑148 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGt > 1:353344/1‑148 (MQ=255) aGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTaa < 7:124857/149‑1 (MQ=255) tGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAAc < 4:191229/149‑1 (MQ=255) aaCCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAAcc < 4:243326/148‑1 (MQ=255) aCCAGATGGTAGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCTCAGTTAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCTCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTg < 1:130260/149‑1 (MQ=255) cAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTgg > 8:81066/1‑148 (MQ=255) gATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTgg > 6:264117/1‑146 (MQ=255) gATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTgg > 5:1286/1‑146 (MQ=255) aTGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCgg > 6:226034/1‑132 (MQ=255) aTGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCgg < 5:226034/132‑1 (MQ=255) gagaAACTCAAAGCCCTGTTCACCGAGCCGGCCGAGCGCATTGAGCGGCTCCGTGCGGAGTCCGACCAGGACAGCCTGACCGGGCTGTCGACGCGCCGCTATTTTGAAATGCAGCTGAACAAACGGGTAAGCAACCTGGAAGCcgcgcg > 2:261242/1‑149 (MQ=255) gagaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgcg > 2:100529/1‑149 (MQ=255) gaAACTCAAAGCCCTGTTCACGGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCTAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGtta < 6:109589/128‑3 (MQ=255) gaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgcgcg > 5:271867/1‑149 (MQ=255) gaAACTCAAAGCCCAGTTCAACGAGCAGGACGAGCGCAGTGAGCCGCTGCGTGCGGAGTCCTACCAGGACAGACTGACCGCGCTGTCGAACCGCCGCTATTTTGAAATGCAGATGAACAATCCGCTaa > 5:109589/1‑128 (MQ=255) cttcattCACCGAGCAGGCCTAGCCCAGGGAGCTGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAGCGGGCTGTGGAACCGACGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctg < 7:247958/144‑1 (MQ=255) cccTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctg < 7:81066/149‑1 (MQ=255) ccTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctgc > 4:133585/1‑149 (MQ=255) cTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATc > 2:133210/1‑109 (MQ=255) cTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATc < 1:133210/109‑1 (MQ=255) cTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctgct > 3:349233/1‑149 (MQ=255) gTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGt > 1:58715/1‑149 (MQ=255) cACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc > 1:7395/1‑132 (MQ=255) cACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc < 2:7395/132‑1 (MQ=255) cACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgc > 4:167607/1‑149 (MQ=255) cACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgc > 1:183500/1‑149 (MQ=255) aCCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgct > 7:304390/1‑149 (MQ=255) cGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgctgc < 1:100529/149‑1 (MQ=255) aGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGCACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCgg < 8:213399/149‑1 (MQ=255) ggCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTc < 3:167607/149‑1 (MQ=255) gCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGtt > 2:301823/1‑147 (MQ=255) cGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGTAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGGGCCGGTTACCTGCTGTTGCTGCGGGTTCAgg > 8:35675/1‑149 (MQ=255) cGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAgg < 2:353344/149‑1 (MQ=255) gAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAggg < 2:365368/149‑1 (MQ=255) gcgcAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGcc > 3:288855/1‑149 (MQ=255) cgcAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCct < 3:358487/149‑1 (MQ=255) cAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCctgg < 6:1286/149‑1 (MQ=255) aGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCtggctggc < 2:183500/149‑1 (MQ=255) cTGCGTGCGGAGTCCTACCAGGACAGCCTGCCCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGaa > 5:40397/1‑149 (MQ=255) gtgcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgcc > 2:156225/1‑149 (MQ=255) tgcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgccc < 6:271867/149‑1 (MQ=255) gTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTGCAGGGCCTGGCTGGCCTGAACGCCCGCCTTg < 8:305333/149‑1 (MQ=255) cTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTTAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAGGCCCGCCTTggc < 2:255785/148‑1 (MQ=255) cTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcg > 4:188258/1‑149 (MQ=255) cTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcg > 7:83157/1‑149 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcgg > 5:240325/1‑149 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcgg > 6:117848/1‑149 (MQ=255) ggttcgACAGCCCGGTCAGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 2:340866/6‑149 (MQ=255) ccAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 7:202764/1‑148 (MQ=255) ccAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 6:168521/1‑148 (MQ=255) ccAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCACTCCTTGGCGGcc > 6:291426/1‑149 (MQ=255) cAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCa < 4:288855/149‑1 (MQ=255) cAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTa < 2:58715/149‑1 (MQ=255) cTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCgc > 8:92420/1‑148 (MQ=255) | CTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGA > NC_002947/188468‑188760 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |