| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 197,179 | A→G | 8.2% | V895V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 197,179 | 0 | A | G | 8.2% | 547.6 / 27.5 | 195 | V895V (GTA→GTG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base A (91/88); new base G (6/10); total (97/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 197 total aligned reads displayed.
CGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAA > NC_002947/197032‑197322 | cGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTa > 4:303740/1‑148 (MQ=38) gTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAAt < 3:303740/149‑1 (MQ=39) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAAt > 6:340262/1‑148 (MQ=255) aGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCa < 8:316028/148‑1 (MQ=21) aGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCAc > 3:330178/1‑149 (MQ=39) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCAcc > 4:75707/1‑149 (MQ=38) tCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTa > 1:296676/1‑148 (MQ=37) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTaca‑c > 7:266959/1‑149 (MQ=37) ccATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑cc > 1:13383/1‑149 (MQ=37) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACA‑CCg > 2:69018/1‑149 (MQ=17) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCg > 2:206792/1‑149 (MQ=37) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCg > 6:187514/1‑149 (MQ=37) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCg > 1:144963/1‑149 (MQ=37) aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGTCGTAATCACCTACA‑CCGt < 3:151303/149‑1 (MQ=37) aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGt > 5:292661/1‑149 (MQ=37) gagaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCTGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCCCCGAAGGCGGCGTGATAACTTACA‑CCGTGAc > 7:151491/1‑149 (MQ=11) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGCCCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGGcc > 8:156984/1‑149 (MQ=255) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACA‑CCGTGAcc > 8:34221/1‑149 (MQ=17) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGAcc > 5:156461/1‑149 (MQ=37) aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCt > 5:129848/1‑149 (MQ=37) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 7:301298/149‑1 (MQ=37) gCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACA‑CCGTGACCCTGAg < 7:157733/149‑1 (MQ=17) gCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAg < 8:272651/149‑1 (MQ=37) ccACAGGCTTTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGCTCACACGATCAAGCTCTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 1:119796/149‑1 (MQ=11) ccACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACA‑CCGTGACCCTGa < 5:314153/147‑1 (MQ=17) ccACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACA‑CCGTGACCCTGa > 6:314153/1‑147 (MQ=17) cacaGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa > 1:169969/1‑146 (MQ=37) cacaGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 2:169969/146‑1 (MQ=37) aGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATc < 3:75707/149‑1 (MQ=35) aGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATc < 5:340262/149‑1 (MQ=25) aGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATc < 2:296676/149‑1 (MQ=25) gCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCt > 6:101556/1‑149 (MQ=34) gCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCt > 5:208812/1‑149 (MQ=34) ggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGc > 2:331036/1‑149 (MQ=34) ctacctttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGc < 7:183071/144‑1 (MQ=21) gTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGCAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGcc > 2:351977/1‑149 (MQ=21) tAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAT‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCAACTACA‑CCGTGACCCTGAGCAATCCTGcc < 3:201058/148‑1 (MQ=21) tAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGc < 3:362364/147‑1 (MQ=34) aaTTTCGAGCAACTGACCCCGAATCCGCCCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGcc > 5:178235/1‑147 (MQ=21) aTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGcc > 3:10388/1‑146 (MQ=34) gAGCAACTGACCCCGACTCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGc < 8:101690/148‑1 (MQ=21) gAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCGGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 4:56121/130‑1 (MQ=25) gAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCCGTGACCCTGAGCAATCCTGCCCAGACGc < 1:22328/149‑1 (MQ=21) gAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa > 3:56121/1‑130 (MQ=35) aCTGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGtga > 8:226616/1‑147 (MQ=14) cTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATc > 7:198935/1‑130 (MQ=35) tGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAAcc < 3:147381/149‑1 (MQ=38) tGACCCCGAACCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGtga > 7:109728/1‑145 (MQ=11) aCCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCg < 6:156461/148‑1 (MQ=38) ccccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 4:185748/120‑1 (MQ=35) cccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGAccc < 6:309175/116‑1 (MQ=35) ccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAg < 8:24900/119‑1 (MQ=35) ccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc > 2:221476/1‑149 (MQ=39) ccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc > 1:90358/1‑149 (MQ=39) ccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc < 2:13383/149‑1 (MQ=39) ccGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc > 1:15613/1‑149 (MQ=39) cccGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTaca < 2:61589/95‑1 (MQ=34) cccGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTaca > 1:61589/1‑95 (MQ=34) cccGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACg > 1:239737/1‑149 (MQ=35) ccGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATc < 8:19320/112‑1 (MQ=32) cGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGc < 2:23335/149‑1 (MQ=34) aG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGt < 7:238506/148‑1 (MQ=17) aC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGtcat < 4:10388/149‑1 (MQ=39) gATCAGCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTg > 7:336252/1‑149 (MQ=255) gATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTg < 5:101556/149‑1 (MQ=255) tCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGtcatca < 1:217839/144‑1 (MQ=40) aaCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGt < 4:250774/124‑1 (MQ=35) aaCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGt > 3:250774/1‑124 (MQ=35) aCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGGAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTg > 3:285985/1‑147 (MQ=255) aCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGaa < 1:331036/149‑1 (MQ=255) cGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAg > 5:66480/1‑149 (MQ=255) cGACTCGGTCCATGCCACCACCGCGACCCTGACGGCGAGACAGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGACATCACTGTTGacg > 1:367006/1‑147 (MQ=255) gACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCa < 7:81260/67‑1 (MQ=35) gACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGc > 4:262654/1‑149 (MQ=255) ggTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAATGGCCAGGTCATCACTGTTGAAGCCgg < 1:196298/147‑1 (MQ=255) gTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCa > 6:4161/1‑148 (MQ=255) tCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGccc > 7:309351/1‑90 (MQ=33) tCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCaaa < 2:15613/149‑1 (MQ=255) caccacCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTc > 6:235586/1‑108 (MQ=35) caccacCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGACAAAACCCAgg < 2:90358/149‑1 (MQ=255) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAg < 4:338387/117‑1 (MQ=37) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAg > 3:338387/1‑117 (MQ=37) gcgACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCTAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGt > 3:180926/1‑149 (MQ=255) cGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCATCGTCGATTTCCAGAcc > 7:58480/1‑149 (MQ=255) gAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGAccc < 5:179650/149‑1 (MQ=255) gCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa < 4:172515/142‑1 (MQ=255) cccGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTg < 4:358884/104‑1 (MQ=255) ccGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGc < 5:346023/149‑1 (MQ=255) gTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGa < 2:217705/44‑1 (MQ=38) gTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGtt < 7:250698/103‑1 (MQ=255) tCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCaa < 4:132303/149‑1 (MQ=255) ggTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAAt > 6:137939/1‑148 (MQ=255) tcacgtaaGGCGGCTTAATCACGACCA‑CCTGGACCCTGATCTATACTCCCCAGACGCCGGTAACCGTGACCCTGTCCAACTGACAGGTCATCACTGTTGAAGCCTGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGAc < 2:367006/143‑1 (MQ=14) tCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGAc < 1:340604/149‑1 (MQ=40) aCCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACg < 6:66480/148‑1 (MQ=39) ccGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGAc > 3:99569/1‑133 (MQ=40) aaGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTac < 1:163469/149‑1 (MQ=39) aaGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTac < 3:63294/149‑1 (MQ=39) ggcgTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCt < 2:209030/142‑1 (MQ=37) ggcgTAATCACCTACA‑CCGTGACCCTGACCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCt > 1:209030/1‑142 (MQ=37) | CGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAG‑AC‑CACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACA‑CCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAA > NC_002947/197032‑197322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |