| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,859,529 | T→A | 6.6% | intergenic (‑121/+35) | PP_1662 ← / ← PP_1663 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,859,529 | 0 | T | A | 6.6% | 323.4 / 9.2 | 106 | intergenic (‑121/+35) | PP_1662/PP_1663 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (50/49); new base A (4/3); total (54/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCCCAGTTC > NC_002947/1859384‑1859675 | aGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTTGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTAGAAGGGATGCTGCCTGTGTGGGCTTTTTCGCAGCAAAGAAAAGCACCGCACTggg > 4:225072/1‑149 (MQ=255) aTGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCg > 1:234081/1‑149 (MQ=255) tGGCAGCGCCACTGTGCCGCACGTCTTCCTAATAGAGTTTGTTAGCCGACTCAGTAAGTACAACAGGCACGAAACAAGTAGCCTGAAGCCCGCAGGGATGCTGCCGGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCgg < 8:62193/149‑1 (MQ=255) cTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGc > 5:296404/1‑149 (MQ=255) cTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGc < 2:62316/149‑1 (MQ=255) tGCGACAGTGTGTCGCACGTCTTCTTTAAAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCt > 1:21866/1‑149 (MQ=255) cGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTc < 4:86480/149‑1 (MQ=255) gACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCa < 8:322409/149‑1 (MQ=255) gACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCa < 1:288914/149‑1 (MQ=255) gACAGTGTGTCGCACGTCTTCTTTATAGAGTTTG‑TAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAg < 1:317878/149‑1 (MQ=255) tgtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTAtt < 6:296404/148‑1 (MQ=255) gtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTg > 5:305106/1‑148 (MQ=255) gtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTg > 8:64593/1‑148 (MQ=255) tCGAACGTCTGTTTTATAGAGTTTTTTTGCTTACTATTTAAGTAAAACAGGAATTAACCACTTTTAATTATGTTCTAAGGTTTGTTGCTTGGTGGGGCTTTTTCGCTG‑AAATTAAACGCCCGCACTGGGCGGGGCTTCAGGTATTgca < 6:377978/148‑1 (MQ=255) gCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgcagg > 6:346482/1‑149 (MQ=255) cACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCCCAGTGCGGGGCttttctttg > 8:184658/1‑135 (MQ=255) cACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCCCAGTGCGGGGCttttctttg < 7:184658/142‑8 (MQ=255) aCGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgcaggca < 2:234081/149‑1 (MQ=255) gTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAATCTCGAAGGGATGATGCCTGGTTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGt > 3:215873/1‑149 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCgg < 3:277394/124‑1 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCACGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcg > 5:253127/1‑149 (MQ=255) tcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgcaggca < 5:176262/143‑1 (MQ=255) tcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgcaggca > 6:176262/1‑143 (MQ=255) tcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGAATTAAAAAAGTTTCATGAAGATCTAAGTGATGATGCCTGTGTGGGCTTTTTATCATCAAATAAAATCCCCTCACTGGTCGGGTCTTCAGGTATTGCAGACAGTgcgc > 1:125022/1‑149 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAGGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGa > 6:346223/1‑149 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGt > 2:347204/1‑131 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGt < 1:347204/131‑1 (MQ=255) ataGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCa > 3:221976/1‑149 (MQ=255) taGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAg > 3:140285/1‑149 (MQ=255) gagTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAGGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGtt < 5:346223/149‑1 (MQ=255) gagTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGtt < 1:234696/149‑1 (MQ=255) agTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcg > 5:105408/1‑139 (MQ=255) agTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcg < 6:105408/139‑1 (MQ=255) gTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc < 7:64593/149‑1 (MQ=255) cTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCtt < 6:253127/149‑1 (MQ=255) cTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCtt < 4:221976/149‑1 (MQ=255) taagtaagTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTc < 3:44082/105‑1 (MQ=255) taagtaagTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTc > 4:44082/1‑105 (MQ=255) gtaagtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTACAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCa < 6:8377/149‑1 (MQ=255) gtaagtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTACAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCa > 7:52463/1‑149 (MQ=255) taagtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCAt > 4:4420/1‑149 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGtt < 3:229461/127‑1 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGtt > 4:229461/1‑127 (MQ=255) gtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGTAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGa < 3:302309/149‑1 (MQ=255) gtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTg < 2:255583/127‑1 (MQ=255) gtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGATGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTg > 1:255583/1‑127 (MQ=255) aCAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGAAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTg > 3:201521/1‑149 (MQ=255) cAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGc > 5:18278/1‑149 (MQ=255) aGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTACAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGcc < 8:52463/149‑1 (MQ=255) tcATGAAACTTGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCAt > 1:171898/2‑149 (MQ=255) aTGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATcc > 4:185428/1‑149 (MQ=255) tGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCt > 4:12741/1‑149 (MQ=255) aaaCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgc < 5:346482/149‑1 (MQ=255) aCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcag < 8:108660/149‑1 (MQ=255) aaGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcagca > 1:172908/1‑149 (MQ=255) aTGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATca > 3:334710/1‑148 (MQ=255) aaGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATa > 2:74661/1‑149 (MQ=255) aGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATAc < 4:201521/149‑1 (MQ=255) tCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTcc > 5:218400/1‑149 (MQ=255) cGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTAACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCt > 5:122009/1‑149 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc > 1:283246/1‑94 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc < 2:283246/94‑1 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt < 4:334710/149‑1 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt < 2:172908/149‑1 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt > 7:175322/1‑149 (MQ=255) gAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt > 6:89968/1‑149 (MQ=255) aGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTTCCATCCTGCAGCACGATCACATAATACTTGc > 8:329514/1‑149 (MQ=255) ggATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCa > 8:193765/1‑149 (MQ=255) gATGCTGCCTGGGTGGGCTTTTTCGCACCAAACAAAAGCCCCGCACTGCGCGGGGCTTAAGGTATTGAAGGCAGTGCGCGAGAATTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTCCAGCACGATAACATACTCCTTGCCAt > 8:91453/1‑149 (MQ=255) ctgcCTGGGTGGGCTTTATCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGt < 2:243159/149‑1 (MQ=255) tgcCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGtc > 3:304620/1‑149 (MQ=255) ccTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGtctc > 5:371793/1‑149 (MQ=255) ggtgggCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTa < 4:140285/147‑1 (MQ=255) tgggCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTg < 6:305106/149‑1 (MQ=255) ggCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGgc < 1:74661/149‑1 (MQ=255) tttttCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGgcg > 7:341707/1‑147 (MQ=255) cGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGc < 6:371793/149‑1 (MQ=255) agcaAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCAc > 2:290537/1‑148 (MQ=255) caAAGAAAAGCCCCGCACTGGGCGGGGCTTCATGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcag < 7:329514/149‑1 (MQ=255) caAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcgc > 1:41070/1‑51 (MQ=255) caAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcgc < 2:41070/51‑1 (MQ=255) caAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcag > 4:333607/1‑149 (MQ=255) aaaGAAAAGCCCCGCACTGGGCGGTGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcagc < 3:225072/149‑1 (MQ=255) aaGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcag > 1:35718/1‑147 (MQ=255) cctgaaGCCCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGTTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcagcag > 3:43006/5‑149 (MQ=255) ctgaaGCCCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAg < 1:321713/133‑1 (MQ=255) ctgaaGCCCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAg > 2:321713/4‑136 (MQ=255) ctgaaGCCCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAgg > 5:111676/4‑149 (MQ=255) aaaaGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAgg > 6:39223/1‑148 (MQ=255) aaaGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt > 8:149321/1‑110 (MQ=255) aaaGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt < 7:149321/110‑1 (MQ=255) aaGCCCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTa < 6:111676/148‑1 (MQ=255) aaGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGTGCAACTGCGCcaggtagaga < 7:193765/149‑8 (MQ=255) aaGCCCCGCACTGGGCGGGGCATAAGGTAATGAAGGCACTCAGCGATCAGTTGCCATACACCGGCTTGCCAACGACCGTGCCATCATGCAGCACGATAACATAATCCTTGCCAACGGTCTCTACCTGCCCCAGAAGCACcagaagc > 8:153877/1‑145 (MQ=255) aGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGt < 8:341707/149‑1 (MQ=255) gCCCCGCACTGGGCGGGGCTTTAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTc > 2:78157/1‑149 (MQ=255) ccGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTg < 2:325217/48‑1 (MQ=255) ccGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTg > 1:325217/1‑48 (MQ=255) ccGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCCCa < 3:102645/149‑1 (MQ=255) aCTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCCCAGTTc < 3:4420/149‑1 (MQ=255) | AGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCCCAGTTC > NC_002947/1859384‑1859675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |