| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 201,328 | G→C | 6.8% | T2278T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 201,328 | 0 | G | C | 6.8% | 213.8 / 5.3 | 73 | T2278T (ACG→ACC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (37/31); new base C (2/3); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
GTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCA > NC_002947/201185‑201474 | gtCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGa > 2:218976/1‑149 (MQ=32) tCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGAc > 5:216636/1‑149 (MQ=32) aTGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGAc > 5:311777/1‑146 (MQ=32) tGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGACCGACCAGa < 6:380297/149‑1 (MQ=17) tCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCg > 2:49602/1‑149 (MQ=34) gACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCgg < 4:200413/148‑1 (MQ=34) aCGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTa < 8:288322/149‑1 (MQ=34) ccGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc < 3:176723/149‑1 (MQ=33) cGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc > 6:164854/1‑148 (MQ=32) gTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCga < 5:76304/149‑1 (MQ=32) gTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCga < 6:340984/149‑1 (MQ=32) tCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCgag < 2:316083/149‑1 (MQ=32) aGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGaa < 5:1558/149‑1 (MQ=32) cAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCaaa < 7:41532/149‑1 (MQ=32) aGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAAc < 1:49602/149‑1 (MQ=33) aGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACt < 5:164854/149‑1 (MQ=38) gAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCa > 3:243247/1‑149 (MQ=39) aacctgaacctgGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGt < 1:218976/149‑1 (MQ=39) acctgaacctgGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGt > 2:46161/1‑148 (MQ=39) aacctgGACAAGAACACGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGTCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAAt < 7:143219/147‑1 (MQ=255) cctgGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGc > 5:106236/1‑149 (MQ=255) ctgGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGcc < 6:216636/149‑1 (MQ=255) gACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACtgtg > 2:8570/1‑132 (MQ=40) gACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACtgtg < 1:8570/132‑1 (MQ=40) cAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg > 7:202846/1‑149 (MQ=255) cAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg < 7:340918/149‑1 (MQ=255) aaGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg < 3:93368/148‑1 (MQ=255) aaGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg > 4:93368/1‑148 (MQ=255) gACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGcc > 2:172719/1‑148 (MQ=255) cccGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGc < 2:328624/140‑1 (MQ=255) cccGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGc > 1:328624/1‑140 (MQ=255) cGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc > 7:58965/1‑95 (MQ=33) cGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc > 7:64168/1‑95 (MQ=33) cGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc < 8:58965/95‑1 (MQ=33) cGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc < 8:64168/95‑1 (MQ=33) cGGGCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGAC < 8:276955‑M1/149‑1 (MQ=255) tCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCT > 2:69318‑M1/1‑148 (MQ=255) gCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATc < 3:295038/149‑1 (MQ=255) aCTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg > 8:288733/1‑133 (MQ=255) aCTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTgg < 7:288733/133‑1 (MQ=255) aCTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGt > 6:118323/1‑149 (MQ=255) cTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGCTCGt > 6:254275/1‑148 (MQ=255) ccGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGAcc > 2:81838/1‑149 (MQ=255) ccAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGc > 8:207591/1‑149 (MQ=255) ccAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGc > 5:264085/1‑149 (MQ=255) aGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCt > 2:1205/1‑148 (MQ=255) aCTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAgg > 4:165357/1‑148 (MQ=255) tCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCa > 7:132124/1‑149 (MQ=255) atctcaacgAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGggcgttgttgctcagggtcacgaccaggtcgtg < 7:296745‑M1/145‑34 (MQ=255) gggcAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGggcgttgttgctcagggtcacgaccaggtcgtgg < 1:326165‑M1/148‑35 (MQ=255) ggCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCAt < 4:243247/149‑1 (MQ=255) aaCGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGggcgttgttgctcagggtcacgaccaggtcgtg > 8:296745‑M1/1‑111 (MQ=255) aaCGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATc > 5:263275/1‑147 (MQ=255) aaCGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCaa < 5:118323/149‑1 (MQ=255) aaCGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCaa < 6:106236/149‑1 (MQ=255) gAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGc > 1:345611/1‑149 (MQ=255) cATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGaaa < 1:69318/149‑1 (MQ=255) tCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACACCGCTCAGGTCACCATCAAGGCCGGTGAAACCAgc > 6:238995/1‑149 (MQ=255) tCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCAc > 3:233601/1‑127 (MQ=255) tCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCAc < 4:233601/127‑1 (MQ=255) tCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAgc < 1:1205/149‑1 (MQ=255) aaaGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTTAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAgcg > 2:223307/2‑149 (MQ=255) aaGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAgcgc > 8:39934/1‑149 (MQ=255) aGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAgcgcg > 2:232605/1‑149 (MQ=255) ggTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAgcgcgc > 7:226537/1‑149 (MQ=255) gTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACAGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGcc > 4:318379/1‑149 (MQ=255) tCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACACCGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCg > 6:348969/1‑149 (MQ=255) cACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCACGTCACCATCAAGGCCCGTTAAACCAGCGCGCCg > 2:90534/1‑148 (MQ=255) acaaTCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACAGACCTTCAATGTGCACGTCAATCAGCCGCTGGACCACGACCTGATCTTGACCCTGAGCAACAACGATCAGGTAACCATCAAGGCCGGTGAAACCAGCGCGCAGTa > 6:270736/4‑149 (MQ=14) aTCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGggcgttgttgctcagggtcacgaccaggtcgtgg > 7:319322‑M1/1‑84 (MQ=255) aTCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGggcgttgttgctcagggtcacgaccaggtcgtgg < 8:319322‑M1/118‑35 (MQ=255) aCGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTTAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACAccc < 1:223307/148‑1 (MQ=255) aCGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCa < 1:172719/149‑1 (MQ=255) | GTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCA > NC_002947/201185‑201474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |