| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,364,099 | A→T | 6.2% | intergenic (‑223/+110) | PP_2076 ← / ← lysA‑I | hypothetical protein/diaminopimelate decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,364,099 | 0 | A | T | 6.2% | 240.3 / 4.7 | 80 | intergenic (‑223/+110) | PP_2076/lysA‑I | hypothetical protein/diaminopimelate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base T (3/2); total (40/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
TCTGATTAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAGGTCCTGCAC > NC_002947/2363953‑2364244 | tCTGATTAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCaaa < 5:328483/148‑1 (MQ=255)tCTGATTAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCaaa < 5:322788/148‑1 (MQ=255) cTGATTAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGc > 6:336752/1‑149 (MQ=255) gtAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGTGGcc < 2:345464/148‑1 (MQ=255) ggCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCACCCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATAGAGACAGGGCCGCACAGCGGcccc > 5:244433/2‑147 (MQ=255) cGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGAtc < 6:61222/149‑1 (MQ=255) ggTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑GCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGAGAGGGCCGCAAAGCGGCCCGAtct < 2:267661/149‑1 (MQ=255) aTCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCAGCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCAc > 1:262989/1‑149 (MQ=255) gTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCa < 4:352034/149‑1 (MQ=255) gTTGACGTTGGCAGGCTTTTAGTCGCCTTTCACGTCAACCCACGTGCCTCTCGTTGCGCCAGCGCTATCGGGTGCAGAGCCAA‑CCAGGTCGCTTTTTATAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCAcc > 5:67125/1‑147 (MQ=255) ttGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGATCGGGCCGCTTTGCGGccctgtc > 8:116318/1‑137 (MQ=255) ttGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGATCGGGCCGCTTTGCGGccctgtc < 7:116318/141‑5 (MQ=255) ggCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTGTTTAATATGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGc < 4:363975/148‑1 (MQ=255) cAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTg > 4:314025/1‑149 (MQ=255) aGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCTTTGCGGccctgt > 5:13239/1‑126 (MQ=255) aGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCTTTGCGGccctgt < 6:13239/129‑4 (MQ=255) aGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCCCAAAGCCGCCCGAAGTCACCCCCCGTGAGCGGGc > 2:161190/1‑149 (MQ=255) ttttCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCggg > 3:178589/1‑149 (MQ=255) ttttCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCCGAAAGCGGCCCGATCTAACACAGCTTGCGCGTGCCggg > 6:21349/1‑149 (MQ=255) ttCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCgggg < 1:361109/148‑1 (MQ=255) ttCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCggg < 1:279766/147‑1 (MQ=255) gtcgCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGAt < 6:364999/148‑1 (MQ=255) tttCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCACGCCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCt > 1:102039/1‑149 (MQ=255) tttCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTg > 1:335131/1‑149 (MQ=255) tttCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTg > 1:169373/1‑149 (MQ=255) tttCACGTCAACCCACCTGCCTCTCGGTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTg > 1:5303/1‑149 (MQ=255) tCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTgg < 2:262989/148‑1 (MQ=255) gTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCg < 6:269960/101‑1 (MQ=255) gTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCg > 5:269960/1‑101 (MQ=255) gTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTg < 1:161190/149‑1 (MQ=255) gTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCCAACTCACCCAGCGTGAGCGGGGCGGGGGATGAAGCTGGAGGTg > 4:366409/1‑149 (MQ=255) cAACCCACCTGGCTCCGCTTTCGGCACGGGCATCGGGTGCATTTCCAA‑CCTGGTCGCTTTTTTTAATACGGTTGCCCATCGTGCAATGGCCGCAAACCGGCCCGTTCTCACCCATCTTTTGCGGTGCGGGGGATGAAGCTGGAGGTGaa < 4:129875/149‑1 (MQ=255) aaCCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGaa < 2:5303/148‑1 (MQ=255) aaCCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAg < 6:143197/149‑1 (MQ=255) cTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGtt < 5:94188/149‑1 (MQ=255) cAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTAACCCAGCTTGAGCGTGCAGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGccc > 6:204188/1‑149 (MQ=255) aTCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAag > 3:23438/1‑149 (MQ=255) tCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCaaaa < 2:335131/147‑1 (MQ=255) tCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAaga < 5:21349/149‑1 (MQ=255) gggTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgt < 3:208922/149‑1 (MQ=255) gggTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgt < 3:314025/149‑1 (MQ=255) ggTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgtg > 1:21979/1‑149 (MQ=255) gTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGTCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgtgt > 3:248587/1‑149 (MQ=255) gTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgtgt < 3:366409/149‑1 (MQ=255) cAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGc < 2:169373/148‑1 (MQ=255) agagCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAg > 7:26483/1‑110 (MQ=255) agagCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAg < 8:26483/110‑1 (MQ=255) ccAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGcc > 7:145778/1‑148 (MQ=255) cAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACCGGGCCGCAAAGCGGCCCGATCTCACCCAGCGTGAGCGTGCCGGGGGATGAAGCGGGGGGGGGAGGGCAGTTGGAAGCGGGCGGGGCCGCAAAAGAGTGTgcccgcccc > 4:42319/1‑148 (MQ=255) ccTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAggg > 4:326684/1‑149 (MQ=255) tGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCt > 1:337718/1‑90 (MQ=255) tGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCt < 2:337718/90‑1 (MQ=255) tGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGc > 3:309198/1‑149 (MQ=255) ggggcgcgTTTTTTAATTCCGCGCCCCAGCGTGACAGGGCCGCAAAGCGGCCCGATCTCACCCTGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGATCGCCAGTTGGAACCGGGCGTGCCCGCAAAACTGTGTGCACGCCCAGGGGc < 6:67125/145‑1 (MQ=255) gTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGa > 3:132414/1‑149 (MQ=255) tCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGAt > 3:181691/1‑149 (MQ=255) tCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGAt < 2:21979/149‑1 (MQ=255) gCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCt > 4:51485/1‑149 (MQ=255) cTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCtt < 3:157292/149‑1 (MQ=255) tttttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgt < 8:18839/126‑1 (MQ=255) tttttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAgt > 7:18839/1‑126 (MQ=255) tttttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCttt > 2:169590/1‑149 (MQ=255) tttttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCtt > 5:226448/1‑148 (MQ=255) tttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCttt < 4:181691/147‑1 (MQ=255) tttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCtt < 6:226448/146‑1 (MQ=255) tttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTa < 4:202616/148‑1 (MQ=255) tttttAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTa < 4:309198/148‑1 (MQ=255) ttttAATACGGTGCCGCATCGAGACAGGGTCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGTGGGATGAAGCTGGAGGTGAATGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAg < 4:248587/148‑1 (MQ=255) aaTACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCGAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAAt < 2:102039/148‑1 (MQ=255) cGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGc < 4:178589/148‑1 (MQ=255) tGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTc > 8:306868/1‑148 (MQ=255) ccGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCa < 5:336752/148‑1 (MQ=255) aTCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCt > 4:341654/1‑148 (MQ=255) gagaCAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTa > 7:12302/1‑127 (MQ=255) gagaCAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTa < 8:12302/127‑1 (MQ=255) gagaCAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTcagc < 1:169590/149‑1 (MQ=255) agatcgggCCGCTTTGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTcag > 7:111597/6‑147 (MQ=255) agaCAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTcag > 5:342348/1‑147 (MQ=255) aCAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAgg < 4:23438/149‑1 (MQ=255) gggCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAGGTcc > 5:155120/1‑149 (MQ=255) cGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCTGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAGGTCCTGCa > 2:108554/1‑149 (MQ=255) gCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAGGTCCTGCAc > 2:77584/1‑149 (MQ=255) | TCTGATTAAGCGGTATCGTTGACGTTGGCAGGCTTTTCGTCGCCTTTCACGTCAACCCACCTGCCTCTCGTTGCGCCAGGGCTATCGGGTGCAGAGCCAC‑CCTGGTCGCTTTTTTTAATACGGTGCCGCATCGAGACAGGGCCGCAAAGCGGCCCGATCTCACCCAGCTTGAGCGTGCCGGGGGATGAAGCTGGAGGTGAAGGCCAGTTGGAAGCGGGCGTGCCCGCAAAAGAGTGTGCACGCCCAGGGGCGATCTTTAGAAATCCGCCTCCAGGCTCAGCAGGTCCTGCAC > NC_002947/2363953‑2364244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |