| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,586,136 | G→C | 5.5% | intergenic (+42/‑500) | PP_t39 → / → PP_2266 | tRNA‑Leu/DNA‑directed RNA polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,586,136 | 0 | G | C | 5.5% | 235.7 / 3.6 | 74 | intergenic (+42/‑500) | PP_t39/PP_2266 | tRNA‑Leu/DNA‑directed RNA polymerase |
| Reads supporting (aligned to +/- strand): ref base G (32/37); new base C (2/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
GCGCCTTTGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCATCCACT > NC_002947/2585988‑2586281 | gcgcCTTTGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACgg > 5:88764/1‑149 (MQ=255) cTTTGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTAGAGTCT‑CTTCGTCAGCACAACGAATTAGAAAAAATCTCCCCGGATTCATGAAAGCCACACGGCTc > 2:186322/1‑148 (MQ=255) ttGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTACAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑Ag > 3:236383/1‑149 (MQ=255) tGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCa‑a < 8:147766/147‑1 (MQ=255) acgCGTTACGCTGACGTGGGGAAATTGCTAGTCACTCTCGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCg < 4:113015/146‑1 (MQ=37) aGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCgg < 6:88764/148‑1 (MQ=255) agTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGa < 1:131982/148‑1 (MQ=255) ttACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGAtt < 3:237771/149‑1 (MQ=255) ggACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTc < 5:98013/149‑1 (MQ=255) gtggtgAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGcc > 2:9769/1‑148 (MQ=255) gtggtgAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCt < 8:274632/149‑1 (MQ=255) gAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCAc > 7:186271/1‑149 (MQ=255) aaTTTGTAGACACACTGTATTTAGGTTCCAGGGGCGCAAGCTGTAAGTGTTCGAGTCT‑CTTCGTCCGCTCGACGAATTAGAATAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACtt < 3:253714/149‑1 (MQ=255) aaTTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCACAGGGTTCGGGGATTTTTTTCGCCTATCAc < 1:214714/148‑1 (MQ=255) gACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAAt < 1:8479/149‑1 (MQ=255) acacTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCgg > 1:325631/1‑116 (MQ=255) acacTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCgg < 2:325631/116‑1 (MQ=255) acTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATa > 5:45994/1‑148 (MQ=255) acTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATAc > 6:96037/1‑149 (MQ=255) acTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATAc > 2:305999/1‑149 (MQ=255) acTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCAGCACCACGAATTAGAAAAAATCTCCACGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGCGATTTTTTTCGACTATCACTTGAACGAATGATAc > 6:314411/1‑149 (MQ=38) gATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGaa < 3:17231/139‑1 (MQ=255) gATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGaa > 4:17231/1‑139 (MQ=255) ggTTCCAGCTGCGCAAGCTGTAAGAGTTCTAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGTATTCCTTAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCATATCACTTGCACGAATGATACCTTTCCACat < 1:186322/149‑1 (MQ=38) ggTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATATCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTATTTCGCCTATCACTTGCACGAATGATACCTTTCcaca > 2:352402/1‑148 (MQ=255) gtaccAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGCCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACAAATGATAACTTTCCACat > 1:54907/4‑148 (MQ=255) gTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTACTTCGTCCGCACCACGAATTAGAAAAAATATCCCCGGATTCCTGAAAGCCACACGCCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCCCTTGCACAAATGATACCTTTCcaca > 1:235586/1‑148 (MQ=38) cAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATaa < 5:257843/148‑1 (MQ=255) aGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATc < 5:96037/149‑1 (MQ=255) ggcgCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGcc < 1:325515/149‑1 (MQ=255) gcAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCTCGAATGATACCTTTCCACATATAATCGCCTtc > 4:297020/1‑149 (MQ=255) cAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCCCACGGCTCA‑AGGGTTCGGGGAGTTTTTTCGCCTAACACTTTCACGAATGAAAACTTTCCACATAAAATCGCATtct > 8:145092/1‑149 (MQ=38) gTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATc < 2:192295/136‑1 (MQ=255) gTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATc > 1:192295/1‑136 (MQ=255) tAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCaaa < 3:160961/149‑1 (MQ=255) tAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCa > 6:136030/1‑147 (MQ=255) agagTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAaga < 5:136030/149‑1 (MQ=255) agagTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAaga < 1:153752/149‑1 (MQ=255) gTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAagagag > 4:93950/1‑149 (MQ=255) ttCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGc < 1:9769/149‑1 (MQ=255) aGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCaaaa < 5:76158/149‑1 (MQ=255) aGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCaa > 3:109126/1‑147 (MQ=255) gTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAg < 3:93950/149‑1 (MQ=255) tct‑cTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGCCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACAAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAgg < 2:235586/149‑1 (MQ=255) tct‑cTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGCCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACAAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAgg < 2:54907/149‑1 (MQ=255) t‑ctTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAggg > 5:369307/1‑148 (MQ=255) gTCCTCACCACGAATTAGAAAAAATCTCCCAGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGcc < 2:181969/119‑1 (MQ=255) gTCCGCACCACGAATTAGAAAAAATCTACCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACTAATGATACCTTTACAAATATAATCGca > 1:181969/1‑118 (MQ=255) cGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTg < 6:74164/149‑1 (MQ=255) gttccacGAATTAGAAAAAATGTCCCCGTATTCCTGTAAGCCACACTGCTCA‑ATGTTTCGTTGATTTTTTTCGCCTATCACTTGCACGATTGATTCCTTTCCTCATATAATCGCCTTCTCACCAAAGAGAGCAAAAGGGACACTTTTgg < 5:314411/146‑1 (MQ=255) gCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAATCCACACGTCTCA‑ATGGTTCGGTGATTTTTTTCGACTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAACGAGAGCAAAAGGGACACTTTTgg < 1:222052/149‑1 (MQ=255) gCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCAACAAATAATCGCCTACTCAGCAAAGAGAGCAAAAGGGACACTTTTgg > 6:92751/1‑149 (MQ=255) ccacGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGCGATTTTTTACCCCTATCACTGGCACCAATGATACCTTACCACATATAAACGCCTTCTCAGCAAAGACACAAAAAGGGACACTTTTGGAac > 6:17563/1‑149 (MQ=255) cacGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGaca < 8:186271/149‑1 (MQ=255) cacGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGaca > 6:230220/1‑149 (MQ=255) cacGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGaca > 4:131028/1‑149 (MQ=255) acGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTGCGGGGATTTTTTTCGCCTATCACTTGACCGAATGATACCTTTCCACATAGAATCGCCTTGTCAGCAAAGAGAGCATAAGGGACACTTGTGGGacc > 4:216740/1‑147 (MQ=255) gAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCAc > 3:361915/1‑68 (MQ=255) gAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCAc < 4:361915/68‑1 (MQ=255) aaaaaTCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCtt > 3:160066/1‑149 (MQ=255) aaTCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAACGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCttttt < 3:216740/149‑1 (MQ=255) cccGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGTGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGa < 6:369307/145‑1 (MQ=255) cGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCtctt < 1:352402/149‑1 (MQ=255) ggATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCtcttc < 1:305999/149‑1 (MQ=255) gATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCtcttct < 6:45994/149‑1 (MQ=255) gATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCtcttct > 2:100152/1‑149 (MQ=255) cTGAAAGCCACACGGCTCA‑AGGGTTCGTGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGcc < 7:71697/149‑1 (MQ=255) cTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGAc > 5:257501/1‑137 (MQ=255) cTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCGCTTCTGAGcc > 8:171528/1‑149 (MQ=255) tGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGccc > 7:84710/1‑149 (MQ=255) aaaGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGcccc > 4:167367/1‑148 (MQ=255) aGCCACACGGCTCA‑AGGGTTCGGTGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTc < 5:92751/148‑1 (MQ=255) gCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCAt > 4:158830/1‑149 (MQ=255) ccACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCATc < 5:230220/149‑1 (MQ=255) accgCTCA‑ATGGTTAGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCATCCACt < 5:17563/146‑1 (MQ=255) acGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCATCCACt < 3:131028/149‑1 (MQ=255) | GCGCCTTTGTTTTAAGCGTTACGCGGACGTGGTGAAATTGGTAGACACACTGGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCT‑CTTCGTCCGCACCACGAATTAGAAAAAATCTCCCCGGATTCCTGAAAGCCACACGGCTCA‑AGGGTTCGGGGATTTTTTTCGCCTATCACTTGCACGAATGATACCTTTCCACATATAATCGCCTTCTCAGCAAAGAGAGCAAAAGGGACACTTTTGGGACACAAAGGCCCTTTTTGACCTCTTCTGAGCCCCTCATCCACT > NC_002947/2585988‑2586281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |