| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,595,176 | C→G | 6.3% | intergenic (+35/‑106) | PP_5511 → / → PP_2273 | hypothetical protein/DNA polymerase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,595,176 | 0 | C | G | 6.3% | 242.9 / 3.5 | 76 | intergenic (+35/‑106) | PP_5511/PP_2273 | hypothetical protein/DNA polymerase I |
| Reads supporting (aligned to +/- strand): ref base C (33/38); new base G (3/2); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
CGATCATGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAATGGCTCCAGGAGCAACATTCCCAAGGCCGC > NC_002947/2595029‑2595323 | cGATCATGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGAcc < 5:227592/149‑1 (MQ=255) aTCATGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTc < 3:338621/149‑1 (MQ=255) aTGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGa < 1:89589/148‑1 (MQ=255) tGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCATTCGTTTCGAGGTCGaa > 8:278903/1‑148 (MQ=255) aTCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAAc < 4:251906/148‑1 (MQ=255) tCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACTGGGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAAc > 6:221609/1‑148 (MQ=255) tCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACg > 1:284053/1‑148 (MQ=255) cTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGaa < 7:137285/148‑1 (MQ=255) ggCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATgg > 1:247678/1‑148 (MQ=255) ggCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATgg < 2:247678/148‑1 (MQ=255) cGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGtt > 6:303635/1‑149 (MQ=255) gAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTc < 1:297878/149‑1 (MQ=255) gCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTg > 3:145240/1‑149 (MQ=255) cccTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCATTCGTTTCGAGGTCGAACAGAAGGGGTTCTTgc < 7:278903/149‑2 (MQ=38) ccTCAAGGGCCTTTACGACGGATTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGa < 6:168634/149‑1 (MQ=255) cTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAg < 7:330214/149‑1 (MQ=255) cTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAg > 7:325469/1‑149 (MQ=255) tCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAgg > 4:47280/1‑149 (MQ=255) aaGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCGCTGCTGACT‑GGGTGACCAATGCAAGAACCCCTTCTGTGCGACCTCGAAACGAATGGGTTCCTGGAgg < 6:292613/147‑1 (MQ=255) aaGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAgg < 7:266642/147‑1 (MQ=255) aGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCa < 6:272039/148‑1 (MQ=255) cTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAAc > 7:105189/1‑124 (MQ=255) cTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAAc < 8:105189/124‑1 (MQ=255) cTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTcc < 7:160831/149‑1 (MQ=255) tACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCGGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCg < 2:222138/147‑1 (MQ=255) ccACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATTCGCCGACCCCCTGCTAACT‑GGGGGACCTATGCAAGAACCGCTTCTGTTCGTCCTCGAAACGAATGGTTTCCTGGAGGcc > 4:303334/1‑137 (MQ=255) cACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATc > 1:78483/1‑149 (MQ=255) cGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCa > 6:161170/1‑149 (MQ=255) ttttGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGc > 3:247688/1‑149 (MQ=255) tgtgATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTGGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCt < 6:132864/148‑1 (MQ=255) tgtgATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCtt > 6:250599/1‑149 (MQ=255) gtgATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCtt < 8:325469/148‑1 (MQ=255) tGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCAt < 4:145240/149‑1 (MQ=255) ccTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGCGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCg > 4:224522/1‑148 (MQ=255) cTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCg > 1:230809/1‑147 (MQ=255) cTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCg > 3:310297/1‑147 (MQ=255) tGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCAtt < 1:52349/134‑1 (MQ=255) tGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCAtt > 2:52349/1‑134 (MQ=255) tGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCg > 5:167471/1‑146 (MQ=255) ccGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGaca > 5:95516/1‑149 (MQ=255) cGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGacac > 1:256594/1‑149 (MQ=255) gATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACg < 3:224522/149‑1 (MQ=255) aTACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACgg < 4:247688/149‑1 (MQ=255) aTACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACgg < 5:250599/149‑1 (MQ=255) aCGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTggg > 6:237156/1‑149 (MQ=255) gagaGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGAc < 2:169147/142‑1 (MQ=255) gagaGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGAc > 1:169147/1‑142 (MQ=255) gagaGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCATGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAg > 3:31049/1‑148 (MQ=255) cTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGAc < 8:321482/137‑1 (MQ=255) cTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGAc > 7:321482/1‑137 (MQ=255) cTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTc < 3:31629/149‑1 (MQ=255) gtgGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAAtt < 3:200586/146‑1 (MQ=255) gtgGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAAtt > 4:200586/1‑146 (MQ=255) aTACGCAGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTg > 1:93062/1‑149 (MQ=255) gCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCt > 1:233792/1‑149 (MQ=255) cccccTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCg < 3:47280/149‑1 (MQ=255) cccTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGcc < 2:256594/149‑1 (MQ=255) ctgctgACTGGGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCa < 5:221609/149‑1 (MQ=255) ctgctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAAt > 8:150017/1‑54 (MQ=255) ctgctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAAt < 7:150017/54‑1 (MQ=255) tgctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGcc < 3:154610/138‑1 (MQ=255) tgctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGcc > 4:154610/1‑138 (MQ=255) ctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATgg < 2:93062/148‑1 (MQ=255) ctgACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATg < 2:233792/147‑1 (MQ=255) aCT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCCTTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGa < 5:303635/147‑1 (MQ=255) aCT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATTGGAGt < 1:139113/149‑1 (MQ=255) aCT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGa < 2:78483/147‑1 (MQ=255) aCT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAg > 4:220384/1‑148 (MQ=255) t‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTc > 3:187336/1‑148 (MQ=255) gggACCAATGCAAGAACCTCTTCTGTTCGACCTCGAAACGATTGGTTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGGAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAAt < 6:296081/149‑1 (MQ=255) ccAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAATTGCt > 7:49945/1‑149 (MQ=255) ggAACCCATTCGTTTCGAGGTCGAACAGAAGGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTTATCGCCATGGGAGTCAAATGGCTCCAGGAg > 8:267001/2‑148 (MQ=38) gAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAATGGCTCCAGGAGc > 6:313753/1‑148 (MQ=255) gAACCCATTCGTTTCGAGGTCGAACAGAAGGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAATGGCTCCAGGAGc > 8:224615/1‑148 (MQ=38) tttCGAGGTCGAACAGAAGGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTTATCGCCATGGGAGTCAAATGGCTCCAGGAGCAACATTCCCAAg < 7:267001/148‑1 (MQ=255) ttCGACCTCGTAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGTAGTCAAATGGCTCCAGGAGCAACATTCCCaa < 6:167471/147‑1 (MQ=255) aCCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCTCCTGGCCTCATCGCCATGGGAGTCAAATGGCTCCAGGAGCAACATTCCCAAGGCCGc < 6:95516/149‑1 (MQ=255) | CGATCATGATCCTGGGCGAAGCCCTCAAGGGCCTGTACCACGGCTTTTGTGATGCCCTGGCCGATACCGGCACGCTCTTCCGAGAGCTGTGGCATACGCCGACCCCCTGCTGACT‑GGGGGACCAATGCAAGAACCCCTTCTGTTCGACCTCGAAACGAATGGGTTCCTGGAGGCAGTCTCCGTCATCCATTGCCTTGTCATCGAAGACACGGCAACTGGGGACGTTAAGAAATTCCCGCCTGGCCTCATCGCCATGGGAGTCAAATGGCTCCAGGAGCAACATTCCCAAGGCCGC > NC_002947/2595029‑2595323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |