| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 68,340 | G→T | 6.2% | intergenic (+28/+147) | PP_0057 → / ← PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 68,340 | 0 | G | T | 6.2% | 319.0 / 8.7 | 105 | intergenic (+28/+147) | PP_0057/PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (52/46); new base T (3/4); total (55/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.12e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CTATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGT > NC_002947/68195‑68487 | cTATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTa > 4:21762/1‑148 (MQ=255)cTATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTa > 4:23632/1‑148 (MQ=255) tataCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACAGGCTGTaa > 4:219398/1‑148 (MQ=255) cGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCg < 1:232558/149‑1 (MQ=255) atatCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGtttt > 3:4575/1‑149 (MQ=255) tcttctACGGGCTGTTGTAGCCGGTGCTGGTGACCGTGATCAGCATGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCTGtt < 6:164950/144‑1 (MQ=255) tcttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGGtt > 5:164950/1‑144 (MQ=255) tcttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGtttttt > 1:128498/1‑148 (MQ=255) cttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTa > 7:311073/1‑149 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTTGTGACCGGGATCAGTATGGTGGTTGGGATCTTCTTTCTGAGAGAAACCAATGCTGTATATATCGACAAATTCTTATGTCCACATTGCATAAAAAAAACGGCTTTTACAGCCGGttttttt < 2:278097/145‑1 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt < 4:106057/147‑1 (MQ=255) gCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCaa > 6:293536/1‑148 (MQ=255) gCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCaa > 2:358224/1‑148 (MQ=255) tgGTACCCGGTGCGTGTGACCGTGATCAGCCTGGTGGTTGGGATCTTCTGTCTTAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCaaaaaaa < 8:351988/149‑1 (MQ=255) gTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAAc < 3:94965/148‑1 (MQ=255) cccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTa < 5:12396/148‑1 (MQ=255) ccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATg > 3:125476/1‑149 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCTTAAAAAAACCGGCTGTAAAAGCCGGttttttt > 1:301605/1‑128 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCg < 4:201672/120‑1 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCg > 3:201672/1‑120 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGttttttt < 2:301605/128‑1 (MQ=255) ggTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCa < 3:21762/149‑1 (MQ=255) ggTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGGCATAAAAAAACCGGCTTTTACAGCCGGTTTTTTTATggcatgt > 5:108647/1‑124 (MQ=37) ggTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGGCATAAAAAAACCGGCTTTTACAGCCGGTTTTTTTATggcatgt < 6:108647/130‑7 (MQ=37) tGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGAtttt < 3:360868/148‑1 (MQ=255) tGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGAtttt > 1:173011/1‑148 (MQ=255) tGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGAtttt > 4:360868/1‑148 (MQ=255) aCCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCa < 2:128498/148‑1 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGa > 8:145335/1‑148 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGa > 7:341166/1‑148 (MQ=255) aGCCTGGTGGTTTGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGAtttt < 7:143582/137‑1 (MQ=255) aGCCTGGTGGTTTGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAAACGGCTGTAAAAGCCTGTTTTTTTATGCCTCAAAAAAACTTATTCACGATTATCAGatcgt > 8:143582/1‑141 (MQ=255) gCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCTCATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCa > 4:301578/1‑149 (MQ=255) cTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATa < 4:165035/149‑1 (MQ=255) tggtTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACaaa < 4:322252/149‑1 (MQ=255) ttGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGa > 4:242390/1‑148 (MQ=255) tGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGaa > 3:268139/1‑148 (MQ=255) gggATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAAt > 6:111386/1‑148 (MQ=255) gATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATa > 7:40440/1‑148 (MQ=255) cttctGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTa > 7:157633/1‑149 (MQ=255) ttctGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAAc > 8:301427/1‑146 (MQ=255) ctgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCTGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGc < 4:4575/148‑1 (MQ=255) ctgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACt < 3:219398/145‑1 (MQ=255) tgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCa > 8:109748/1‑148 (MQ=255) gtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCaaa > 6:369202/1‑149 (MQ=255) tctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCAGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCaaa < 7:145335/148‑1 (MQ=255) agagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTc < 2:242057/147‑1 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATa > 2:222851/1‑149 (MQ=255) gaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATaca < 4:125476/149‑1 (MQ=255) aaaCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATacac > 5:305940/1‑149 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTATTTTATCCCTCAAAAAAACTTATGCACGATAATCAGAAAAAAATCATACAAAGAAATAACTAGAAAAATCATACACtt > 2:63751/1‑149 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACt > 1:113044/1‑146 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAg < 2:173011/149‑1 (MQ=255) aaGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACt > 3:294780/1‑145 (MQ=255) aGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGat < 2:113044/149‑1 (MQ=255) tAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAAt > 3:98004/1‑149 (MQ=255) aGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAAt > 1:110014/1‑148 (MQ=255) aGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAAAAACTAGCAAATTCATACACTTAGATATAAAt > 3:366453/1‑148 (MQ=255) tatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCaa < 4:268139/149‑1 (MQ=255) cGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTc < 4:16769/99‑1 (MQ=255) cGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTc > 3:16769/1‑99 (MQ=255) gACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa > 4:106144/1‑132 (MQ=255) gACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa < 3:106144/132‑1 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa < 7:30968/131‑1 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa > 8:30968/1‑131 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt > 6:49089/1‑149 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt > 3:359769/1‑149 (MQ=255) cAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt > 7:132047/1‑148 (MQ=255) gTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc < 8:341166/149‑1 (MQ=255) tGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCa > 5:16298/1‑148 (MQ=255) tGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCa > 7:71745/1‑148 (MQ=255) gATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGatat < 7:76282/127‑1 (MQ=255) gATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCaa > 4:331152/1‑148 (MQ=255) aTGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCaa < 8:40440/147‑1 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt < 7:102360/43‑1 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt > 8:102360/1‑43 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGc < 4:294780/149‑1 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGc < 5:369202/149‑1 (MQ=255) acaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca > 7:148846/1‑149 (MQ=255) acaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca < 3:331152/149‑1 (MQ=255) aTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGcaca < 8:311073/149‑1 (MQ=255) ccATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACTATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 6:305940/149‑1 (MQ=255) ccATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 4:359769/149‑1 (MQ=255) cATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTATATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 8:157633/148‑1 (MQ=255) cATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 5:49089/148‑1 (MQ=255) cATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAg < 2:110014/149‑1 (MQ=255) cATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAg < 4:366453/149‑1 (MQ=255) aTAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGt > 2:169143/1‑149 (MQ=255) aTAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGt > 2:290127/1‑149 (MQ=255) aaaaaaaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTa > 7:112075/1‑149 (MQ=255) aaaaaaCCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATAAATTCAAGCATTTAATCCAAAAACTGCACACAATTTAt > 5:97785/1‑149 (MQ=255) aaaaaaCCGGCTGTAAAAGCCGG‑TTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc < 5:111386/149‑1 (MQ=255) aaaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCca > 8:200225/1‑149 (MQ=255) ggCTTTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATCCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 1:358224/149‑1 (MQ=255) ggCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 8:148846/149‑1 (MQ=255) gCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAg < 6:16298/149‑1 (MQ=255) tGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAt > 8:269976/1‑111 (MQ=255) tGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAt < 7:269976/111‑1 (MQ=255) tGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAgg > 5:142118/1‑148 (MQ=255) tGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGt > 2:305890/1‑149 (MQ=255) | CTATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGT > NC_002947/68195‑68487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |